RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 LHFPL4Q7Z7J7 247 aa6.96□□□□□ -1.29
CTNND1-227ENST00000530748 WFDC12Q8WWY7 111 aa6.96□□□□□ -1.29
CTNND1-227ENST00000530748 B4DSR2 109 aa6.96□□□□□ -1.3
CTNND1-227ENST00000530748 RPL15P61313 204 aaKnown RBP6.96□□□□□ -1.3
CTNND1-227ENST00000530748 TEX38Q6PEX7 206 aa6.96□□□□□ -1.3
CTNND1-227ENST00000530748 FAM169BQ8N8A8 192 aa6.96□□□□□ -1.3
CTNND1-227ENST00000530748 C5orf30Q96GV9 206 aa6.96□□□□□ -1.3
CTNND1-227ENST00000530748 PRDM13Q9H4Q3 707 aa6.96□□□□□ -1.3
CTNND1-227ENST00000530748 GREB1Q4ZG55 1949 aa6.96□□□□□ -1.3
CTNND1-227ENST00000530748 IGHG3P01860 377 aa6.96□□□□□ -1.3
CTNND1-227ENST00000530748 LINC01559Q495D7 138 aa6.96□□□□□ -1.3
CTNND1-227ENST00000530748 TMEM219Q86XT9 240 aa6.96□□□□□ -1.3
CTNND1-227ENST00000530748 LINC01356Q8N9X3 169 aa6.96□□□□□ -1.3
CTNND1-227ENST00000530748 OR9G4Q8NGQ1 327 aa6.96□□□□□ -1.3
CTNND1-227ENST00000530748 PPIFP30405 207 aaKnown RBP6.96□□□□□ -1.3
CTNND1-227ENST00000530748 TRAV9-2A0A087WT02 112 aa6.95□□□□□ -1.3
CTNND1-227ENST00000530748 PAX2Q02962 417 aa6.95□□□□□ -1.3
CTNND1-227ENST00000530748 ZNF415Q09FC8 603 aa6.95□□□□□ -1.3
CTNND1-227ENST00000530748 SCRT1Q9BWW7 348 aa6.95□□□□□ -1.3
CTNND1-227ENST00000530748 CYTL1Q9NRR1 136 aa6.95□□□□□ -1.3
CTNND1-227ENST00000530748 SMPXQ9UHP9 88 aa6.95□□□□□ -1.3
CTNND1-227ENST00000530748 PRRC2BQ5JSZ5 2229 aaKnown RBP6.95□□□□□ -1.3
CTNND1-227ENST00000530748 PSG1P11464 419 aa6.95□□□□□ -1.3
CTNND1-227ENST00000530748 C3orf36Q3SXR2 165 aa6.95□□□□□ -1.3
CTNND1-227ENST00000530748 ATRAIDQ6UW56 229 aa6.95□□□□□ -1.3
CTNND1-227ENST00000530748 USMG5Q96IX5 58 aa6.95□□□□□ -1.3
CTNND1-227ENST00000530748 TMEM8BA6NDV4 472 aa6.95□□□□□ -1.3
CTNND1-227ENST00000530748 SH2D1AO60880 128 aa6.95□□□□□ -1.3
CTNND1-227ENST00000530748 SLC25A16P16260 332 aa6.95□□□□□ -1.3
CTNND1-227ENST00000530748 PSG3Q16557 428 aa6.95□□□□□ -1.3
CTNND1-227ENST00000530748 UNQ6494/PRO21346Q6UXR6 183 aa6.95□□□□□ -1.3
CTNND1-227ENST00000530748 AGMATQ9BSE5 352 aa6.95□□□□□ -1.3
CTNND1-227ENST00000530748 TRAV2A0A0B4J234 112 aa6.95□□□□□ -1.3
CTNND1-227ENST00000530748 GFI1BQ5VTD9 330 aa6.95□□□□□ -1.3
CTNND1-227ENST00000530748 PHLDA1Q8WV24 401 aaPredicted RBP6.95□□□□□ -1.3
CTNND1-227ENST00000530748 TRAV3A0A0B4J244 114 aa6.95□□□□□ -1.3
CTNND1-227ENST00000530748 TRAV1-1A0A0B4J248 108 aa6.95□□□□□ -1.3
CTNND1-227ENST00000530748 PSPNO60542 156 aa6.95□□□□□ -1.3
CTNND1-227ENST00000530748 LINC00527Q9UJ94 153 aa6.95□□□□□ -1.3
CTNND1-227ENST00000530748 NAPSAO96009 420 aa6.94□□□□□ -1.3
CTNND1-227ENST00000530748 CA1P00915 261 aaPredicted RBP6.94□□□□□ -1.3
CTNND1-227ENST00000530748 QRFPP83859 136 aa6.94□□□□□ -1.3
CTNND1-227ENST00000530748 KIR3DL3Q8N743 410 aa6.94□□□□□ -1.3
CTNND1-227ENST00000530748 OR2K2Q8NGT1 345 aa6.94□□□□□ -1.3
CTNND1-227ENST00000530748 PCM1Q15154 2024 aa6.94□□□□□ -1.3
CTNND1-227ENST00000530748 UBE2CO00762 179 aa6.94□□□□□ -1.3
CTNND1-227ENST00000530748 Q6ZS49 121 aa6.94□□□□□ -1.3
CTNND1-227ENST00000530748 C9orf139Q6ZV77 190 aa6.94□□□□□ -1.3
CTNND1-227ENST00000530748 SRSF8Q9BRL6 282 aaKnown RBP6.94□□□□□ -1.3
CTNND1-227ENST00000530748 CLDN16Q9Y5I7 305 aa6.94□□□□□ -1.3
CTNND1-227ENST00000530748 GBF1Q92538 1859 aa6.94□□□□□ -1.3
CTNND1-227ENST00000530748 PMS2P5A8MQ11 134 aa6.94□□□□□ -1.3
CTNND1-227ENST00000530748 SELLP14151 372 aa6.94□□□□□ -1.3
CTNND1-227ENST00000530748 BMPERQ8N8U9 685 aa6.94□□□□□ -1.3
CTNND1-227ENST00000530748 H3BUT2 72 aa6.94□□□□□ -1.3
CTNND1-227ENST00000530748 SUPT4H1P63272 117 aaKnown RBP6.94□□□□□ -1.3
CTNND1-227ENST00000530748 C5orf64Q2M2E5 130 aa6.94□□□□□ -1.3
CTNND1-227ENST00000530748 NMSQ5H8A3 153 aa6.94□□□□□ -1.3
CTNND1-227ENST00000530748 EXOC3-AS1Q8N2X6 119 aa6.94□□□□□ -1.3
CTNND1-227ENST00000530748 LINC00477Q96M19 166 aa6.94□□□□□ -1.3
CTNND1-227ENST00000530748 IGKV1D-17A0A075B6S4 117 aa6.94□□□□□ -1.3
CTNND1-227ENST00000530748 IGKV1-5P01602 117 aa6.94□□□□□ -1.3
CTNND1-227ENST00000530748 TYMSP04818 313 aa6.94□□□□□ -1.3
CTNND1-227ENST00000530748 TMEM155Q4W5P6 130 aa6.94□□□□□ -1.3
CTNND1-227ENST00000530748 ACTL10Q5JWF8 245 aa6.94□□□□□ -1.3
CTNND1-227ENST00000530748 HAPLN4Q86UW8 402 aa6.94□□□□□ -1.3
CTNND1-227ENST00000530748 LAMTOR2Q9Y2Q5 125 aa6.94□□□□□ -1.3
CTNND1-227ENST00000530748 LY96Q9Y6Y9 160 aa6.94□□□□□ -1.3
CTNND1-227ENST00000530748 TRAV8-4A0A0B4J246 113 aa6.93□□□□□ -1.3
CTNND1-227ENST00000530748 NPIPB5A8MRT5 1133 aa6.93□□□□□ -1.3
CTNND1-227ENST00000530748 ZNF329Q86UD4 541 aa6.93□□□□□ -1.3
CTNND1-227ENST00000530748 CHCHD5Q9BSY4 110 aa6.93□□□□□ -1.3
CTNND1-227ENST00000530748 TCRAP04437 139 aa6.93□□□□□ -1.3
CTNND1-227ENST00000530748 GZMBP10144 247 aa6.93□□□□□ -1.3
CTNND1-227ENST00000530748 COL8A2P25067 703 aa6.93□□□□□ -1.3
CTNND1-227ENST00000530748 ZNF138P52744 262 aa6.93□□□□□ -1.3
CTNND1-227ENST00000530748 C10orf55Q5SWW7 151 aa6.93□□□□□ -1.3
CTNND1-227ENST00000530748 TMEM14EPQ6UXP3 125 aa6.93□□□□□ -1.3
CTNND1-227ENST00000530748 MS4A6AQ9H2W1 248 aa6.93□□□□□ -1.3
CTNND1-227ENST00000530748 LYZL1Q6UWQ5 148 aa6.93□□□□□ -1.3
CTNND1-227ENST00000530748 LYPD1Q8N2G4 141 aa6.93□□□□□ -1.3
CTNND1-227ENST00000530748 FNDC10F2Z333 226 aa6.93□□□□□ -1.3
CTNND1-227ENST00000530748 H3BUX3 64 aa6.93□□□□□ -1.3
CTNND1-227ENST00000530748 FOXL1Q12952 345 aa6.93□□□□□ -1.3
CTNND1-227ENST00000530748 C11orf44Q8N8P7 122 aa6.93□□□□□ -1.3
CTNND1-227ENST00000530748 ORAOV1Q8WV07 137 aa6.93□□□□□ -1.3
CTNND1-227ENST00000530748 D6R8Y8 96 aa6.92□□□□□ -1.3
CTNND1-227ENST00000530748 HIST1H2BKO60814 126 aa6.92□□□□□ -1.3
CTNND1-227ENST00000530748 INSP01308 110 aa6.92□□□□□ -1.3
CTNND1-227ENST00000530748 HIST1H2BJP06899 126 aa6.92□□□□□ -1.3
CTNND1-227ENST00000530748 HIST1H2BOP23527 126 aa6.92□□□□□ -1.3
CTNND1-227ENST00000530748 CEACAM8P31997 349 aaPredicted RBP6.92□□□□□ -1.3
CTNND1-227ENST00000530748 HIST1H2BBP33778 126 aa6.92□□□□□ -1.3
CTNND1-227ENST00000530748 HIST1H2BDP58876 126 aa6.92□□□□□ -1.3
CTNND1-227ENST00000530748 HIST1H2BCP62807 126 aa6.92□□□□□ -1.3
CTNND1-227ENST00000530748 HIST2H2BEQ16778 126 aa6.92□□□□□ -1.3
CTNND1-227ENST00000530748 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.92□□□□□ -1.3
CTNND1-227ENST00000530748 MORN3Q6PF18 240 aaPredicted RBP6.92□□□□□ -1.3
CTNND1-227ENST00000530748 HIST1H2BHQ93079 126 aa6.92□□□□□ -1.3
CTNND1-227ENST00000530748 RNF166Q96A37 237 aaPredicted RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms