RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 SELENOKQ9Y6D0 94 aa8.2□□□□□ -1.1
SOX6-213ENST00000530378 A0A1B0GUS0 222 aa8.19□□□□□ -1.1
SOX6-213ENST00000530378 I3L521 148 aa8.19□□□□□ -1.1
SOX6-213ENST00000530378 LINC00869P0C866 280 aa8.19□□□□□ -1.1
SOX6-213ENST00000530378 SLURP1P55000 103 aa8.19□□□□□ -1.1
SOX6-213ENST00000530378 RAB2AP61019 212 aa8.19□□□□□ -1.1
SOX6-213ENST00000530378 B2MP61769 119 aa8.19□□□□□ -1.1
SOX6-213ENST00000530378 RAB31Q13636 194 aa8.19□□□□□ -1.1
SOX6-213ENST00000530378 C4orf3Q8WVX3 66 aa8.19□□□□□ -1.1
SOX6-213ENST00000530378 PCNPQ8WW12 178 aaKnown RBP8.19□□□□□ -1.1
SOX6-213ENST00000530378 ZNF414Q96IQ9 312 aa8.19□□□□□ -1.1
SOX6-213ENST00000530378 TRGV9Q99603 122 aa8.19□□□□□ -1.1
SOX6-213ENST00000530378 TXN2Q99757 166 aa8.19□□□□□ -1.1
SOX6-213ENST00000530378 C20orf24Q9BUV8 137 aa8.19□□□□□ -1.1
SOX6-213ENST00000530378 SLC45A2Q9UMX9 530 aa8.19□□□□□ -1.1
SOX6-213ENST00000530378 TSSC4Q9Y5U2 329 aaPredicted RBP8.19□□□□□ -1.1
SOX6-213ENST00000530378 PUS1Q9Y606 427 aaKnown RBP eCLIP8.19□□□□□ -1.1
SOX6-213ENST00000530378 TRRAPQ9Y4A5 3859 aa8.19□□□□□ -1.1
SOX6-213ENST00000530378 ADARB2-AS1A8MUL3 147 aa8.19□□□□□ -1.1
SOX6-213ENST00000530378 C17orf112F2Z3M2 114 aa8.19□□□□□ -1.1
SOX6-213ENST00000530378 IL4P05112 153 aa8.19□□□□□ -1.1
SOX6-213ENST00000530378 RD3LP0DJH9 198 aa8.19□□□□□ -1.1
SOX6-213ENST00000530378 ORM2P19652 201 aa8.19□□□□□ -1.1
SOX6-213ENST00000530378 FCGR2BP31994 310 aaPredicted RBP8.19□□□□□ -1.1
SOX6-213ENST00000530378 CDX1P47902 265 aaPredicted RBP8.19□□□□□ -1.1
SOX6-213ENST00000530378 OR11H1Q8NG94 326 aa8.19□□□□□ -1.1
SOX6-213ENST00000530378 OR51G1Q8NGK1 321 aa8.19□□□□□ -1.1
SOX6-213ENST00000530378 OR1B1Q8NGR6 318 aa8.19□□□□□ -1.1
SOX6-213ENST00000530378 STOML3Q8TAV4 291 aa8.19□□□□□ -1.1
SOX6-213ENST00000530378 RAX2Q96IS3 184 aa8.19□□□□□ -1.1
SOX6-213ENST00000530378 ARV1Q9H2C2 271 aa8.19□□□□□ -1.1
SOX6-213ENST00000530378 IGHV3OR16-13A0A075B7E8 117 aa8.18□□□□□ -1.1
SOX6-213ENST00000530378 IGHV3-49A0A0A0MS15 119 aa8.18□□□□□ -1.1
SOX6-213ENST00000530378 IGHV3-74A0A0B4J1X5 117 aa8.18□□□□□ -1.1
SOX6-213ENST00000530378 ZNF320A2RRD8 509 aa8.18□□□□□ -1.1
SOX6-213ENST00000530378 MPDU1O75352 247 aa8.18□□□□□ -1.1
SOX6-213ENST00000530378 TOMM40O96008 361 aa8.18□□□□□ -1.1
SOX6-213ENST00000530378 EDN2P20800 178 aa8.18□□□□□ -1.1
SOX6-213ENST00000530378 HOXD3P31249 432 aaPredicted RBP8.18□□□□□ -1.1
SOX6-213ENST00000530378 RPEL1Q2QD12 228 aa8.18□□□□□ -1.1
SOX6-213ENST00000530378 UNQ9165/PRO28630Q6UXU0 137 aa8.18□□□□□ -1.1
SOX6-213ENST00000530378 UHRF2Q96PU4 802 aa8.18□□□□□ -1.1
SOX6-213ENST00000530378 PARD6GQ9BYG4 376 aaPredicted RBP8.18□□□□□ -1.1
SOX6-213ENST00000530378 SLC39A9Q9NUM3 307 aa8.18□□□□□ -1.1
SOX6-213ENST00000530378 TRAV30A0A087WSZ9 112 aa8.17□□□□□ -1.1
SOX6-213ENST00000530378 HMGB3O15347 200 aaKnown RBP8.17□□□□□ -1.1
SOX6-213ENST00000530378 GGCTO75223 188 aaKnown RBP8.17□□□□□ -1.1
SOX6-213ENST00000530378 SCGB2A1O75556 95 aa8.17□□□□□ -1.1
SOX6-213ENST00000530378 TSPAN15O95858 294 aa8.17□□□□□ -1.1
SOX6-213ENST00000530378 OR5G3P0C626 314 aa8.17□□□□□ -1.1
SOX6-213ENST00000530378 FHITP49789 147 aa8.17□□□□□ -1.1
SOX6-213ENST00000530378 SYNJ2BPP57105 145 aa8.17□□□□□ -1.1
SOX6-213ENST00000530378 EIF5AP63241 154 aaKnown RBP8.17□□□□□ -1.1
SOX6-213ENST00000530378 USF2Q15853 346 aaPredicted RBP8.17□□□□□ -1.1
SOX6-213ENST00000530378 TOMM20LQ6UXN7 152 aa8.17□□□□□ -1.1
SOX6-213ENST00000530378 OR1N2Q8NGR9 330 aa8.17□□□□□ -1.1
SOX6-213ENST00000530378 TMEM158Q8WZ71 300 aa8.17□□□□□ -1.1
SOX6-213ENST00000530378 DPF1Q92782 380 aa8.17□□□□□ -1.1
SOX6-213ENST00000530378 GNPNAT1Q96EK6 184 aaPredicted RBP8.17□□□□□ -1.1
SOX6-213ENST00000530378 GAR1Q9NY12 217 aaKnown RBP8.17□□□□□ -1.1
SOX6-213ENST00000530378 IGHV3-66A0A0C4DH42 116 aa8.17□□□□□ -1.1
SOX6-213ENST00000530378 A0A1B0GV50 99 aa8.17□□□□□ -1.1
SOX6-213ENST00000530378 SPP1P10451 314 aa8.17□□□□□ -1.1
SOX6-213ENST00000530378 RPL29P47914 159 aaKnown RBP8.17□□□□□ -1.1
SOX6-213ENST00000530378 PRR20EP86478 221 aa8.17□□□□□ -1.1
SOX6-213ENST00000530378 PRR20CP86479 221 aa8.17□□□□□ -1.1
SOX6-213ENST00000530378 PRR20DP86480 221 aa8.17□□□□□ -1.1
SOX6-213ENST00000530378 PRR20BP86481 221 aa8.17□□□□□ -1.1
SOX6-213ENST00000530378 PRR20AP86496 221 aa8.17□□□□□ -1.1
SOX6-213ENST00000530378 SPATA31B1PQ5VZV4 182 aa8.17□□□□□ -1.1
SOX6-213ENST00000530378 FAM122CQ6P4D5 195 aa8.17□□□□□ -1.1
SOX6-213ENST00000530378 SPSB3Q6PJ21 355 aa8.17□□□□□ -1.1
SOX6-213ENST00000530378 ZNF600Q6ZNG1 722 aa8.17□□□□□ -1.1
SOX6-213ENST00000530378 IQCF2Q8IXL9 164 aa8.17□□□□□ -1.1
SOX6-213ENST00000530378 Q8WTZ3 238 aa8.17□□□□□ -1.1
SOX6-213ENST00000530378 RNF125Q96EQ8 232 aa8.17□□□□□ -1.1
SOX6-213ENST00000530378 ZFAND3Q9H8U3 227 aa8.17□□□□□ -1.1
SOX6-213ENST00000530378 SLC25A22Q9H936 323 aa8.17□□□□□ -1.1
SOX6-213ENST00000530378 TIMM9Q9Y5J7 89 aa8.17□□□□□ -1.1
SOX6-213ENST00000530378 ANK2Q01484 3957 aa8.16□□□□□ -1.1
SOX6-213ENST00000530378 LINC01619G3V211 115 aa8.16□□□□□ -1.1
SOX6-213ENST00000530378 COX7A2P2O60397 106 aa8.16□□□□□ -1.1
SOX6-213ENST00000530378 HSPB1P04792 205 aaKnown RBP8.16□□□□□ -1.1
SOX6-213ENST00000530378 FABP1P07148 127 aa8.16□□□□□ -1.1
SOX6-213ENST00000530378 YPEL3P61236 119 aaPredicted RBP8.16□□□□□ -1.1
SOX6-213ENST00000530378 IFITM2Q01629 132 aa8.16□□□□□ -1.1
SOX6-213ENST00000530378 RELQ04864 619 aaPredicted RBP8.16□□□□□ -1.1
SOX6-213ENST00000530378 AKR1C8PQ5T2L2 129 aa8.16□□□□□ -1.1
SOX6-213ENST00000530378 LEMD1Q68G75 181 aa8.16□□□□□ -1.1
SOX6-213ENST00000530378 C12orf54Q6X4T0 127 aa8.16□□□□□ -1.1
SOX6-213ENST00000530378 C3orf56Q8N813 242 aa8.16□□□□□ -1.1
SOX6-213ENST00000530378 PSMG3Q9BT73 122 aaPredicted RBP8.16□□□□□ -1.1
SOX6-213ENST00000530378 CCL24O00175 119 aa8.15□□□□□ -1.1
SOX6-213ENST00000530378 SELENOTP62341 195 aa8.15□□□□□ -1.1
SOX6-213ENST00000530378 TM4SF20Q53R12 229 aa8.15□□□□□ -1.1
SOX6-213ENST00000530378 FAM209BQ5JX69 171 aa8.15□□□□□ -1.1
SOX6-213ENST00000530378 MORN5Q5VZ52 161 aa8.15□□□□□ -1.1
SOX6-213ENST00000530378 TEX261Q6UWH6 196 aa8.15□□□□□ -1.1
SOX6-213ENST00000530378 PATE2Q6UY27 113 aa8.15□□□□□ -1.1
SOX6-213ENST00000530378 Q6ZRG5 221 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms