RNA–Protein interactions for RNA: ENST00000530174.1

PCNX3-203, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 1,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-203ENST00000530174 CSTL1Q9H114 145 aa13.85□□□□□ -0.19
PCNX3-203ENST00000530174 IGKV1D-37A0A075B6S9 117 aa13.84□□□□□ -0.19
PCNX3-203ENST00000530174 HELTA6NFD8 242 aa13.84□□□□□ -0.19
PCNX3-203ENST00000530174 MPTX1A8MV57 137 aa13.84□□□□□ -0.19
PCNX3-203ENST00000530174 WRBO00258 174 aa13.84□□□□□ -0.19
PCNX3-203ENST00000530174 EIF2B2P49770 351 aaKnown RBP13.84□□□□□ -0.19
PCNX3-203ENST00000530174 OR51G1Q8NGK1 321 aa13.84□□□□□ -0.19
PCNX3-203ENST00000530174 COQ8AQ8NI60 647 aa13.84□□□□□ -0.19
PCNX3-203ENST00000530174 DCANP1Q8TF63 244 aa13.84□□□□□ -0.19
PCNX3-203ENST00000530174 A0A0J9YWU9 116 aa13.83□□□□□ -0.2
PCNX3-203ENST00000530174 LCE6AA0A183 80 aa13.83□□□□□ -0.2
PCNX3-203ENST00000530174 ZNF688P0C7X2 276 aa13.83□□□□□ -0.2
PCNX3-203ENST00000530174 ZNF90Q03938 601 aa13.83□□□□□ -0.2
PCNX3-203ENST00000530174 C4orf46Q504U0 113 aa13.83□□□□□ -0.2
PCNX3-203ENST00000530174 RNF125Q96EQ8 232 aa13.83□□□□□ -0.2
PCNX3-203ENST00000530174 PLA2G10O15496 165 aa13.82□□□□□ -0.2
PCNX3-203ENST00000530174 BUB3O43684 328 aa13.82□□□□□ -0.2
PCNX3-203ENST00000530174 RPP30P78346 268 aaKnown RBP13.82□□□□□ -0.2
PCNX3-203ENST00000530174 PBDC1Q9BVG4 233 aa13.82□□□□□ -0.2
PCNX3-203ENST00000530174 RYR2Q92736 4967 aa13.81□□□□□ -0.2
PCNX3-203ENST00000530174 PRSS46E5RG02 174 aa13.81□□□□□ -0.2
PCNX3-203ENST00000530174 H3BP45 60 aa13.81□□□□□ -0.2
PCNX3-203ENST00000530174 IFNA21P01568 189 aa13.81□□□□□ -0.2
PCNX3-203ENST00000530174 AP2S1P53680 142 aaPredicted RBP13.81□□□□□ -0.2
PCNX3-203ENST00000530174 EWSR1Q01844 656 aaKnown RBP eCLIP13.81□□□□□ -0.2
PCNX3-203ENST00000530174 ID3Q02535 119 aa13.81□□□□□ -0.2
PCNX3-203ENST00000530174 SPANXN5Q5MJ07 72 aa13.81□□□□□ -0.2
PCNX3-203ENST00000530174 TRGV9Q99603 122 aa13.81□□□□□ -0.2
PCNX3-203ENST00000530174 IGKV1OR2-108A0A075B7D4 117 aa13.8□□□□□ -0.2
PCNX3-203ENST00000530174 LYRM1O43325 122 aa13.8□□□□□ -0.2
PCNX3-203ENST00000530174 CA1P00915 261 aaPredicted RBP13.8□□□□□ -0.2
PCNX3-203ENST00000530174 FABP1P07148 127 aa13.8□□□□□ -0.2
PCNX3-203ENST00000530174 LYZP61626 148 aa13.8□□□□□ -0.2
PCNX3-203ENST00000530174 POLR2GP62487 172 aaKnown RBP eCLIP13.8□□□□□ -0.2
PCNX3-203ENST00000530174 OR2F1Q13607 317 aa13.8□□□□□ -0.2
PCNX3-203ENST00000530174 CNPY1Q3B7I2 92 aa13.8□□□□□ -0.2
PCNX3-203ENST00000530174 OR8G2PQ6IF36 304 aa13.8□□□□□ -0.2
PCNX3-203ENST00000530174 SIGLEC15Q6ZMC9 328 aa13.8□□□□□ -0.2
PCNX3-203ENST00000530174 STHQ8IWL8 128 aa13.8□□□□□ -0.2
PCNX3-203ENST00000530174 THAP8Q8NA92 274 aa13.8□□□□□ -0.2
PCNX3-203ENST00000530174 OR4D5Q8NGN0 318 aa13.8□□□□□ -0.2
PCNX3-203ENST00000530174 GATAD1Q8WUU5 269 aa13.8□□□□□ -0.2
PCNX3-203ENST00000530174 C20orf85Q9H1P6 137 aa13.8□□□□□ -0.2
PCNX3-203ENST00000530174 STRAPQ9Y3F4 350 aaKnown RBP13.8□□□□□ -0.2
PCNX3-203ENST00000530174 SACSQ9NZJ4 4579 aa13.8□□□□□ -0.2
PCNX3-203ENST00000530174 AGRNO00468 2067 aa13.79□□□□□ -0.2
PCNX3-203ENST00000530174 KNCNA6PVL3 124 aa13.79□□□□□ -0.2
PCNX3-203ENST00000530174 NUP62P37198 522 aaPredicted RBP13.79□□□□□ -0.2
PCNX3-203ENST00000530174 NKX2-1P43699 371 aaPredicted RBP13.79□□□□□ -0.2
PCNX3-203ENST00000530174 NRN1Q9NPD7 142 aa13.79□□□□□ -0.2
PCNX3-203ENST00000530174 SNRPGP15A8MWD9 76 aa13.78□□□□□ -0.2
PCNX3-203ENST00000530174 PSMG4Q5JS54 123 aa13.78□□□□□ -0.2
PCNX3-203ENST00000530174 TRPT1Q86TN4 253 aaKnown RBP13.78□□□□□ -0.2
PCNX3-203ENST00000530174 MITD1Q8WV92 249 aa13.78□□□□□ -0.2
PCNX3-203ENST00000530174 PFDN2Q9UHV9 154 aa13.78□□□□□ -0.2
PCNX3-203ENST00000530174 SSSCA1O60232 199 aa13.77□□□□□ -0.21
PCNX3-203ENST00000530174 PMS2P11Q13670 270 aa13.77□□□□□ -0.21
PCNX3-203ENST00000530174 ACTL10Q5JWF8 245 aa13.77□□□□□ -0.21
PCNX3-203ENST00000530174 ACOT7LQ6ZUV0 252 aa13.77□□□□□ -0.21
PCNX3-203ENST00000530174 RARRES2Q99969 163 aa13.77□□□□□ -0.21
PCNX3-203ENST00000530174 CCDC32Q9BV29 185 aa13.77□□□□□ -0.21
PCNX3-203ENST00000530174 PSENENQ9NZ42 101 aa13.77□□□□□ -0.21
PCNX3-203ENST00000530174 TCRBP04435 133 aa13.76□□□□□ -0.21
PCNX3-203ENST00000530174 AKR1C1Q04828 323 aa13.76□□□□□ -0.21
PCNX3-203ENST00000530174 IAH1Q2TAA2 248 aaPredicted RBP13.76□□□□□ -0.21
PCNX3-203ENST00000530174 OR11H2Q8NH07 326 aa13.76□□□□□ -0.21
PCNX3-203ENST00000530174 LYSTQ99698 3801 aa13.76□□□□□ -0.21
PCNX3-203ENST00000530174 TRAV6A0A075B6T7 132 aa13.75□□□□□ -0.21
PCNX3-203ENST00000530174 CXorf65A6NEN9 183 aa13.75□□□□□ -0.21
PCNX3-203ENST00000530174 SCGB1D2O95969 90 aa13.75□□□□□ -0.21
PCNX3-203ENST00000530174 GIG44P09565 113 aaPredicted RBP13.75□□□□□ -0.21
PCNX3-203ENST00000530174 ATF4P18848 351 aaPredicted RBP13.75□□□□□ -0.21
PCNX3-203ENST00000530174 SNRPD3P62318 126 aaKnown RBP13.75□□□□□ -0.21
PCNX3-203ENST00000530174 TMEM217Q8N7C4 229 aa13.75□□□□□ -0.21
PCNX3-203ENST00000530174 ZBTB8BQ8NAP8 495 aaPredicted RBP13.75□□□□□ -0.21
PCNX3-203ENST00000530174 PPP1R14BQ96C90 147 aa13.75□□□□□ -0.21
PCNX3-203ENST00000530174 SMIM8Q96KF7 97 aa13.75□□□□□ -0.21
PCNX3-203ENST00000530174 RAB40CQ96S21 281 aa13.75□□□□□ -0.21
PCNX3-203ENST00000530174 SEPSECSQ9HD40 501 aaKnown RBP13.75□□□□□ -0.21
PCNX3-203ENST00000530174 SPP1P10451 314 aa13.74□□□□□ -0.21
PCNX3-203ENST00000530174 C4BPBP20851 252 aa13.74□□□□□ -0.21
PCNX3-203ENST00000530174 PAX9P55771 341 aa13.74□□□□□ -0.21
PCNX3-203ENST00000530174 C1orf194Q5T5A4 169 aa13.74□□□□□ -0.21
PCNX3-203ENST00000530174 MORN3Q6PF18 240 aaPredicted RBP13.74□□□□□ -0.21
PCNX3-203ENST00000530174 LINC00299Q6ZSB3 139 aa13.74□□□□□ -0.21
PCNX3-203ENST00000530174 NUDT15Q9NV35 164 aa13.74□□□□□ -0.21
PCNX3-203ENST00000530174 GSKIPQ9P0R6 139 aa13.74□□□□□ -0.21
PCNX3-203ENST00000530174 FBXL17Q9UF56 701 aa13.74□□□□□ -0.21
PCNX3-203ENST00000530174 PMS2P5A8MQ11 134 aa13.73□□□□□ -0.21
PCNX3-203ENST00000530174 CCNKO75909 580 aa13.73□□□□□ -0.21
PCNX3-203ENST00000530174 JTBO76095 146 aa13.73□□□□□ -0.21
PCNX3-203ENST00000530174 CFDP00746 253 aaPredicted RBP13.73□□□□□ -0.21
PCNX3-203ENST00000530174 GATA2P23769 480 aaPredicted RBP13.73□□□□□ -0.21
PCNX3-203ENST00000530174 TMEM182Q6ZP80 229 aaPredicted RBP13.73□□□□□ -0.21
PCNX3-203ENST00000530174 WDR12Q9GZL7 423 aaKnown RBP13.73□□□□□ -0.21
PCNX3-203ENST00000530174 SMCO3A2RU48 225 aa13.72□□□□□ -0.21
PCNX3-203ENST00000530174 CCSO14618 274 aa13.72□□□□□ -0.21
PCNX3-203ENST00000530174 TMEM41BQ5BJD5 291 aa13.72□□□□□ -0.21
PCNX3-203ENST00000530174 TMEM14EPQ6UXP3 125 aa13.72□□□□□ -0.21
PCNX3-203ENST00000530174 TMEM144Q7Z5S9 345 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms