RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 PDZD9Q8IXQ8 264 aa2.77□□□□□ -1.97
CAPRIN1-208ENST00000530008 C3orf56Q8N813 242 aa2.77□□□□□ -1.97
CAPRIN1-208ENST00000530008 DYDC1Q8WWB3 177 aa2.77□□□□□ -1.97
CAPRIN1-208ENST00000530008 GPX7Q96SL4 187 aaPredicted RBP2.77□□□□□ -1.97
CAPRIN1-208ENST00000530008 SLC50A1Q9BRV3 221 aa2.77□□□□□ -1.97
CAPRIN1-208ENST00000530008 COL5A1P20908 1838 aaPredicted RBP2.77□□□□□ -1.97
CAPRIN1-208ENST00000530008 OR2T1O43869 369 aa2.76□□□□□ -1.97
CAPRIN1-208ENST00000530008 AKR1C3P42330 323 aa2.76□□□□□ -1.97
CAPRIN1-208ENST00000530008 DYNLT1P63172 113 aa2.76□□□□□ -1.97
CAPRIN1-208ENST00000530008 ZNF846Q147U1 533 aa2.76□□□□□ -1.97
CAPRIN1-208ENST00000530008 SLC30A7Q8NEW0 376 aa2.76□□□□□ -1.97
CAPRIN1-208ENST00000530008 BCL2L10Q9HD36 194 aa2.76□□□□□ -1.97
CAPRIN1-208ENST00000530008 ECM29Q5VYK3 1845 aa2.76□□□□□ -1.97
CAPRIN1-208ENST00000530008 VWDEQ8N2E2 1590 aa2.75□□□□□ -1.97
CAPRIN1-208ENST00000530008 TRAV1-1A0A0B4J248 108 aa2.75□□□□□ -1.97
CAPRIN1-208ENST00000530008 FUOMA2VDF0 154 aa2.75□□□□□ -1.97
CAPRIN1-208ENST00000530008 NDUFB3O43676 98 aa2.75□□□□□ -1.97
CAPRIN1-208ENST00000530008 IFNA14P01570 189 aa2.75□□□□□ -1.97
CAPRIN1-208ENST00000530008 TRGC2P03986 189 aa2.75□□□□□ -1.97
CAPRIN1-208ENST00000530008 DYNLT3P51808 116 aa2.75□□□□□ -1.97
CAPRIN1-208ENST00000530008 KRTAP13-4Q3LI77 160 aa2.75□□□□□ -1.97
CAPRIN1-208ENST00000530008 SOSTDC1Q6X4U4 206 aa2.75□□□□□ -1.97
CAPRIN1-208ENST00000530008 Q6ZRN7 208 aaPredicted RBP2.75□□□□□ -1.97
CAPRIN1-208ENST00000530008 KRTAP5-5Q701N2 237 aaPredicted RBP2.75□□□□□ -1.97
CAPRIN1-208ENST00000530008 COA5Q86WW8 74 aa2.75□□□□□ -1.97
CAPRIN1-208ENST00000530008 KRTAP13-1Q8IUC0 172 aa2.75□□□□□ -1.97
CAPRIN1-208ENST00000530008 TEX37Q96LM6 180 aa2.75□□□□□ -1.97
CAPRIN1-208ENST00000530008 MED11Q9P086 117 aa2.75□□□□□ -1.97
CAPRIN1-208ENST00000530008 ANKRD30AQ9BXX3 1397 aa2.74□□□□□ -1.97
CAPRIN1-208ENST00000530008 TRAV3A0A0B4J244 114 aa2.74□□□□□ -1.97
CAPRIN1-208ENST00000530008 PFDN1O60925 122 aa2.74□□□□□ -1.97
CAPRIN1-208ENST00000530008 CRPP02741 224 aa2.74□□□□□ -1.97
CAPRIN1-208ENST00000530008 MGST1P10620 155 aaKnown RBP2.74□□□□□ -1.97
CAPRIN1-208ENST00000530008 GLI3P10071 1580 aa2.74□□□□□ -1.97
CAPRIN1-208ENST00000530008 PLXND1Q9Y4D7 1925 aa2.74□□□□□ -1.97
CAPRIN1-208ENST00000530008 A0A1W2PRE2 83 aa2.73□□□□□ -1.97
CAPRIN1-208ENST00000530008 TLCD2A6NGC4 264 aa2.73□□□□□ -1.97
CAPRIN1-208ENST00000530008 GPX1P07203 203 aa2.73□□□□□ -1.97
CAPRIN1-208ENST00000530008 BAALC-AS2P0C853 105 aa2.73□□□□□ -1.97
CAPRIN1-208ENST00000530008 MIFP14174 115 aa2.73□□□□□ -1.97
CAPRIN1-208ENST00000530008 RHOGP84095 191 aa2.73□□□□□ -1.97
CAPRIN1-208ENST00000530008 ESRGQ1W209 222 aa2.73□□□□□ -1.97
CAPRIN1-208ENST00000530008 PCOTHQ58A44 107 aa2.73□□□□□ -1.97
CAPRIN1-208ENST00000530008 OR52A1Q9UKL2 312 aa2.73□□□□□ -1.97
CAPRIN1-208ENST00000530008 NDUFAF1Q9Y375 327 aa2.73□□□□□ -1.97
CAPRIN1-208ENST00000530008 SETD5Q9C0A6 1442 aa2.73□□□□□ -1.97
CAPRIN1-208ENST00000530008 NCKAP5O14513 1909 aa2.73□□□□□ -1.97
CAPRIN1-208ENST00000530008 RIMBP3CA6NJZ7 1639 aa2.72□□□□□ -1.97
CAPRIN1-208ENST00000530008 RIMBP3BA6NNM3 1639 aa2.72□□□□□ -1.97
CAPRIN1-208ENST00000530008 RIMBP3Q9UFD9 1639 aa2.72□□□□□ -1.97
CAPRIN1-208ENST00000530008 ASAH2BP0C7U1 165 aa2.72□□□□□ -1.97
CAPRIN1-208ENST00000530008 RNASE10Q5GAN6 216 aaKnown RBP2.72□□□□□ -1.97
CAPRIN1-208ENST00000530008 FKBP1CQ5VVH2 108 aa2.72□□□□□ -1.97
CAPRIN1-208ENST00000530008 PHF13Q86YI8 300 aaPredicted RBP2.72□□□□□ -1.97
CAPRIN1-208ENST00000530008 PPTC7Q8NI37 304 aa2.72□□□□□ -1.97
CAPRIN1-208ENST00000530008 RTL8AQ9BWD3 113 aa2.72□□□□□ -1.97
CAPRIN1-208ENST00000530008 NPCDR1Q9BY65 106 aa2.72□□□□□ -1.97
CAPRIN1-208ENST00000530008 KIAA2026Q5HYC2 2103 aa2.72□□□□□ -1.97
CAPRIN1-208ENST00000530008 CUL9Q8IWT3 2517 aa2.72□□□□□ -1.97
CAPRIN1-208ENST00000530008 OVOL1O14753 267 aa2.71□□□□□ -1.98
CAPRIN1-208ENST00000530008 KRTAP12-1P59990 96 aa2.71□□□□□ -1.98
CAPRIN1-208ENST00000530008 FP248Q71RG6 208 aaPredicted RBP2.71□□□□□ -1.98
CAPRIN1-208ENST00000530008 IFT20Q8IY31 132 aa2.71□□□□□ -1.98
CAPRIN1-208ENST00000530008 Q96M85 177 aa2.71□□□□□ -1.98
CAPRIN1-208ENST00000530008 SLC25A21Q9BQT8 299 aaPredicted RBP2.71□□□□□ -1.98
CAPRIN1-208ENST00000530008 POPDC3Q9HBV1 291 aa2.71□□□□□ -1.98
CAPRIN1-208ENST00000530008 LAMTOR3Q9UHA4 124 aa2.71□□□□□ -1.98
CAPRIN1-208ENST00000530008 HS3ST2Q9Y278 367 aa2.71□□□□□ -1.98
CAPRIN1-208ENST00000530008 CCDC88AQ3V6T2 1871 aa2.71□□□□□ -1.98
CAPRIN1-208ENST00000530008 MPDZO75970 2070 aa2.7□□□□□ -1.98
CAPRIN1-208ENST00000530008 STRCP1A6NGW2 1772 aa2.7□□□□□ -1.98
CAPRIN1-208ENST00000530008 F8W036 122 aa2.7□□□□□ -1.98
CAPRIN1-208ENST00000530008 H3BQV1 296 aa2.7□□□□□ -1.98
CAPRIN1-208ENST00000530008 TIMM17BO60830 172 aa2.7□□□□□ -1.98
CAPRIN1-208ENST00000530008 UBL3O95164 117 aa2.7□□□□□ -1.98
CAPRIN1-208ENST00000530008 GADD45GO95257 159 aa2.7□□□□□ -1.98
CAPRIN1-208ENST00000530008 SSR2P43308 183 aa2.7□□□□□ -1.98
CAPRIN1-208ENST00000530008 MYL5Q02045 173 aa2.7□□□□□ -1.98
CAPRIN1-208ENST00000530008 C1orf140Q5VVS0 124 aa2.7□□□□□ -1.98
CAPRIN1-208ENST00000530008 EIF5AL1Q6IS14 154 aaKnown RBP2.7□□□□□ -1.98
CAPRIN1-208ENST00000530008 GRPEL2Q8TAA5 225 aa2.7□□□□□ -1.98
CAPRIN1-208ENST00000530008 RMND5BQ96G75 393 aaPredicted RBP2.7□□□□□ -1.98
CAPRIN1-208ENST00000530008 PLXNA3P51805 1871 aa2.69□□□□□ -1.98
CAPRIN1-208ENST00000530008 MYH11P35749 1972 aa2.69□□□□□ -1.98
CAPRIN1-208ENST00000530008 E7EQ34 232 aa2.69□□□□□ -1.98
CAPRIN1-208ENST00000530008 CXCL1P09341 107 aa2.69□□□□□ -1.98
CAPRIN1-208ENST00000530008 ZNF705BP0CI00 300 aaPredicted RBP2.69□□□□□ -1.98
CAPRIN1-208ENST00000530008 HLA-EP13747 358 aa2.69□□□□□ -1.98
CAPRIN1-208ENST00000530008 RTL8BQ17RB0 113 aa2.69□□□□□ -1.98
CAPRIN1-208ENST00000530008 CROCCP2Q86T23 111 aa2.69□□□□□ -1.98
CAPRIN1-208ENST00000530008 LINC00311Q8N616 119 aa2.69□□□□□ -1.98
CAPRIN1-208ENST00000530008 ZNF418Q8TF45 676 aaPredicted RBP2.69□□□□□ -1.98
CAPRIN1-208ENST00000530008 ZNF625Q96I27 306 aaPredicted RBP2.69□□□□□ -1.98
CAPRIN1-208ENST00000530008 CARD19Q96LW7 228 aa2.69□□□□□ -1.98
CAPRIN1-208ENST00000530008 LINC00467Q9BRT7 94 aa2.69□□□□□ -1.98
CAPRIN1-208ENST00000530008 ADAT1Q9BUB4 502 aaKnown RBP2.69□□□□□ -1.98
CAPRIN1-208ENST00000530008 CCDC32Q9BV29 185 aa2.69□□□□□ -1.98
CAPRIN1-208ENST00000530008 PTPRBP23467 1997 aa2.69□□□□□ -1.98
CAPRIN1-208ENST00000530008 HEATR5AQ86XA9 2040 aa2.68□□□□□ -1.98
CAPRIN1-208ENST00000530008 ODAMA1E959 279 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms