RNA–Protein interactions for RNA: ENST00000529919.5

CTNND1-222, Transcript of catenin delta 1, human

TSL 5 BASIC

Gene CTNND1, Length 4,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-222	ENST00000529919	ZNF319	Q9P2F9	582 aa		6.62	□□□□□ -1.35
CTNND1-222	ENST00000529919		Q6ZS92	163 aa		6.62	□□□□□ -1.35
CTNND1-222	ENST00000529919	RPP25L	Q8N5L8	163 aa	Known RBP	6.62	□□□□□ -1.35
CTNND1-222	ENST00000529919	WBP1	Q96G27	269 aa		6.62	□□□□□ -1.35
CTNND1-222	ENST00000529919	GTSF1L	Q9H1H1	148 aa		6.62	□□□□□ -1.35
CTNND1-222	ENST00000529919	COL4A6	Q14031	1691 aa		6.62	□□□□□ -1.35
CTNND1-222	ENST00000529919	IGKV1D-33	P01593	117 aa		6.62	□□□□□ -1.35
CTNND1-222	ENST00000529919	IGKV1-33	P01594	117 aa		6.62	□□□□□ -1.35
CTNND1-222	ENST00000529919	IFI27	P40305	119 aa	Predicted RBP	6.62	□□□□□ -1.35
CTNND1-222	ENST00000529919	BMPER	Q8N8U9	685 aa		6.62	□□□□□ -1.35
CTNND1-222	ENST00000529919	ASCL2	Q99929	193 aa		6.62	□□□□□ -1.35
CTNND1-222	ENST00000529919	OTOR	Q9NRC9	128 aa		6.62	□□□□□ -1.35
CTNND1-222	ENST00000529919	CYSLTR1	Q9Y271	337 aa		6.62	□□□□□ -1.35
CTNND1-222	ENST00000529919	NAV3	Q8IVL0	2385 aa		6.62	□□□□□ -1.35
CTNND1-222	ENST00000529919	TM4SF5	O14894	197 aa		6.62	□□□□□ -1.35
CTNND1-222	ENST00000529919	CCL3L1	P16619	93 aa		6.62	□□□□□ -1.35
CTNND1-222	ENST00000529919	CD69	Q07108	199 aa		6.62	□□□□□ -1.35
CTNND1-222	ENST00000529919	SRSF4	Q08170	494 aa	Known RBP	6.62	□□□□□ -1.35
CTNND1-222	ENST00000529919	CENPV	Q7Z7K6	275 aa	Predicted RBP	6.62	□□□□□ -1.35
CTNND1-222	ENST00000529919	LINC01551	Q86U37	167 aa		6.62	□□□□□ -1.35
CTNND1-222	ENST00000529919	FLVCR1-AS1	Q8TAF5	88 aa		6.62	□□□□□ -1.35
CTNND1-222	ENST00000529919	TSKU	Q8WUA8	353 aa		6.62	□□□□□ -1.35
CTNND1-222	ENST00000529919	C7orf69	Q9H7B7	122 aa		6.62	□□□□□ -1.35
CTNND1-222	ENST00000529919	PSG8	Q9UQ74	426 aa		6.62	□□□□□ -1.35
CTNND1-222	ENST00000529919	RLF	Q13129	1914 aa		6.62	□□□□□ -1.35
CTNND1-222	ENST00000529919	C2CD3	Q4AC94	2353 aa		6.62	□□□□□ -1.35
CTNND1-222	ENST00000529919	SUPT4H1	P63272	117 aa	Known RBP	6.61	□□□□□ -1.35
CTNND1-222	ENST00000529919	CD300E	Q496F6	205 aa	Predicted RBP	6.61	□□□□□ -1.35
CTNND1-222	ENST00000529919	RNF182	Q8N6D2	247 aa		6.61	□□□□□ -1.35
CTNND1-222	ENST00000529919	GFI1	Q99684	422 aa		6.61	□□□□□ -1.35
CTNND1-222	ENST00000529919	REG4	Q9BYZ8	158 aa		6.61	□□□□□ -1.35
CTNND1-222	ENST00000529919	CYTL1	Q9NRR1	136 aa		6.61	□□□□□ -1.35
CTNND1-222	ENST00000529919		A0A0G2JLM5	398 aa		6.61	□□□□□ -1.35
CTNND1-222	ENST00000529919	UPK2	O00526	184 aa		6.61	□□□□□ -1.35
CTNND1-222	ENST00000529919	EVI2A	P22794	236 aa		6.61	□□□□□ -1.35
CTNND1-222	ENST00000529919	CLEC19A	Q6UXS0	136 aa		6.61	□□□□□ -1.35
CTNND1-222	ENST00000529919	DMRTC2	Q8IXT2	367 aa	Predicted RBP	6.61	□□□□□ -1.35
CTNND1-222	ENST00000529919	BCL6B	Q8N143	479 aa	Predicted RBP	6.61	□□□□□ -1.35
CTNND1-222	ENST00000529919	KIR3DL3	Q8N743	410 aa		6.61	□□□□□ -1.35
CTNND1-222	ENST00000529919	EP400	Q96L91	3159 aa		6.61	□□□□□ -1.35
CTNND1-222	ENST00000529919	C15orf61	A6NNL5	157 aa		6.61	□□□□□ -1.35
CTNND1-222	ENST00000529919	NPIPB5	A8MRT5	1133 aa		6.61	□□□□□ -1.35
CTNND1-222	ENST00000529919	LHX2	P50458	406 aa		6.61	□□□□□ -1.35
CTNND1-222	ENST00000529919	SRSF1	Q07955	248 aa	Known RBP eCLIP	6.61	□□□□□ -1.35	1e-7	■□□□□ 10.7
CTNND1-222	ENST00000529919	ZNF664	Q8N3J9	261 aa		6.61	□□□□□ -1.35
CTNND1-222	ENST00000529919	C1orf162	Q8NEQ5	155 aa	Predicted RBP	6.61	□□□□□ -1.35
CTNND1-222	ENST00000529919	RNF125	Q96EQ8	232 aa		6.61	□□□□□ -1.35
CTNND1-222	ENST00000529919	MS4A6A	Q9H2W1	248 aa		6.61	□□□□□ -1.35
CTNND1-222	ENST00000529919	SLC25A15	Q9Y619	301 aa		6.61	□□□□□ -1.35
CTNND1-222	ENST00000529919	ZGRF1	Q86YA3	2104 aa		6.61	□□□□□ -1.35
CTNND1-222	ENST00000529919	SAA2-SAA4	A0A096LPE2	208 aa		6.61	□□□□□ -1.35
CTNND1-222	ENST00000529919	IGKC	P01834	107 aa		6.61	□□□□□ -1.35
CTNND1-222	ENST00000529919	SAA2	P0DJI9	122 aa	Predicted RBP	6.61	□□□□□ -1.35
CTNND1-222	ENST00000529919	PRR31	Q5SQ13	230 aa		6.61	□□□□□ -1.35
CTNND1-222	ENST00000529919	OR9G4	Q8NGQ1	327 aa		6.61	□□□□□ -1.35
CTNND1-222	ENST00000529919	CHCHD1	Q96BP2	118 aa	Known RBP	6.61	□□□□□ -1.35
CTNND1-222	ENST00000529919		A0A087X0K7	114 aa		6.6	□□□□□ -1.35
CTNND1-222	ENST00000529919	TRAV8-1	A0A0A6YYK1	113 aa		6.6	□□□□□ -1.35
CTNND1-222	ENST00000529919	C3orf79	P0CE67	100 aa		6.6	□□□□□ -1.35
CTNND1-222	ENST00000529919	LHFPL1	Q86WI0	220 aa		6.6	□□□□□ -1.35
CTNND1-222	ENST00000529919	GLMP	Q8WWB7	406 aa		6.6	□□□□□ -1.35
CTNND1-222	ENST00000529919	DUX3	Q96PT4	197 aa		6.6	□□□□□ -1.35
CTNND1-222	ENST00000529919		A0A0A6YYD4	124 aa		6.6	□□□□□ -1.35
CTNND1-222	ENST00000529919	PINLYP	A6NC86	204 aa		6.6	□□□□□ -1.35
CTNND1-222	ENST00000529919	IGHV3-11	P01762	117 aa		6.6	□□□□□ -1.35
CTNND1-222	ENST00000529919	CD7	P09564	240 aa		6.6	□□□□□ -1.35
CTNND1-222	ENST00000529919	PRB4	P10163	310 aa	Predicted RBP	6.6	□□□□□ -1.35
CTNND1-222	ENST00000529919	IGHV1-2	P23083	117 aa		6.6	□□□□□ -1.35
CTNND1-222	ENST00000529919	PRTN3	P24158	256 aa		6.6	□□□□□ -1.35
CTNND1-222	ENST00000529919	PLA2G5	P39877	138 aa		6.6	□□□□□ -1.35
CTNND1-222	ENST00000529919	NRN1L	Q496H8	165 aa		6.6	□□□□□ -1.35
CTNND1-222	ENST00000529919	GTF3A	Q92664	365 aa	Known RBP	6.6	□□□□□ -1.35
CTNND1-222	ENST00000529919	ARPC1A	Q92747	370 aa		6.6	□□□□□ -1.35
CTNND1-222	ENST00000529919	SPRR3	Q9UBC9	169 aa		6.6	□□□□□ -1.35
CTNND1-222	ENST00000529919	MRPS18C	Q9Y3D5	142 aa	Known RBP	6.6	□□□□□ -1.35
CTNND1-222	ENST00000529919	RFNG	Q9Y644	331 aa		6.6	□□□□□ -1.35
CTNND1-222	ENST00000529919	hDV102S1	A0JD36	115 aa		6.6	□□□□□ -1.35
CTNND1-222	ENST00000529919	RBMY1B	A6NDE4	496 aa	Known RBP	6.6	□□□□□ -1.35
CTNND1-222	ENST00000529919	RBMY1E	A6NEQ0	496 aa	Known RBP	6.6	□□□□□ -1.35
CTNND1-222	ENST00000529919	YPEL1	O60688	119 aa		6.6	□□□□□ -1.35
CTNND1-222	ENST00000529919	PF4	P02776	101 aa		6.6	□□□□□ -1.35
CTNND1-222	ENST00000529919	RBMY1D	P0C7P1	496 aa	Known RBP	6.6	□□□□□ -1.35
CTNND1-222	ENST00000529919	RBMY1A1	P0DJD3	496 aa	Known RBP	6.6	□□□□□ -1.35
CTNND1-222	ENST00000529919	RBMY1C	P0DJD4	496 aa		6.6	□□□□□ -1.35
CTNND1-222	ENST00000529919	RNASE4	P34096	147 aa	Known RBP	6.6	□□□□□ -1.35
CTNND1-222	ENST00000529919	GAS1	P54826	345 aa		6.6	□□□□□ -1.35
CTNND1-222	ENST00000529919	ERVK11-1	P61568	191 aa		6.6	□□□□□ -1.35
CTNND1-222	ENST00000529919	UBE2V1	Q13404	147 aa		6.6	□□□□□ -1.35
CTNND1-222	ENST00000529919	GUSBP1	Q15486	140 aa		6.6	□□□□□ -1.35
CTNND1-222	ENST00000529919	SP5	Q6BEB4	398 aa	Predicted RBP	6.6	□□□□□ -1.35
CTNND1-222	ENST00000529919	PIP4P1	Q86T03	277 aa		6.6	□□□□□ -1.35
CTNND1-222	ENST00000529919	PPP1R27	Q86WC6	154 aa		6.6	□□□□□ -1.35
CTNND1-222	ENST00000529919	YPEL2	Q96QA6	119 aa		6.6	□□□□□ -1.35
CTNND1-222	ENST00000529919	GGTLC1	Q9BX51	225 aa		6.6	□□□□□ -1.35
CTNND1-222	ENST00000529919	SEPSECS	Q9HD40	501 aa	Known RBP	6.6	□□□□□ -1.35
CTNND1-222	ENST00000529919	TRAV1-1	A0A0B4J248	108 aa		6.6	□□□□□ -1.35
CTNND1-222	ENST00000529919	TCRBV4S1A1T	A0A5B7	111 aa		6.6	□□□□□ -1.35
CTNND1-222	ENST00000529919		J3QRE1	110 aa		6.6	□□□□□ -1.35
CTNND1-222	ENST00000529919	MAJIN	Q3KP22	176 aa		6.6	□□□□□ -1.35
CTNND1-222	ENST00000529919	ORMDL2	Q53FV1	153 aa		6.6	□□□□□ -1.35

Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms