RNA–Protein interactions for RNA: ENST00000529205.1

HIF3A-212, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-212ENST00000529205 TP53RKQ96S44 253 aa9.56□□□□□ -0.88
HIF3A-212ENST00000529205 TMEM208Q9BTX3 173 aa9.56□□□□□ -0.88
HIF3A-212ENST00000529205 MAGT1Q9H0U3 335 aa9.56□□□□□ -0.88
HIF3A-212ENST00000529205 VCX3AQ9NNX9 186 aa9.56□□□□□ -0.88
HIF3A-212ENST00000529205 COPZ2Q9P299 210 aa9.56□□□□□ -0.88
HIF3A-212ENST00000529205 B3GALNT1O75752 331 aa9.55□□□□□ -0.88
HIF3A-212ENST00000529205 TOMM40O96008 361 aa9.55□□□□□ -0.88
HIF3A-212ENST00000529205 P0C879 139 aa9.55□□□□□ -0.88
HIF3A-212ENST00000529205 PSMB3P49720 205 aa9.55□□□□□ -0.88
HIF3A-212ENST00000529205 CCL18P55774 89 aa9.55□□□□□ -0.88
HIF3A-212ENST00000529205 PSG9Q00887 426 aa9.55□□□□□ -0.88
HIF3A-212ENST00000529205 C2orf83Q53S99 150 aa9.55□□□□□ -0.88
HIF3A-212ENST00000529205 GDF5OSQ5U4N7 250 aa9.55□□□□□ -0.88
HIF3A-212ENST00000529205 GPR141Q7Z602 305 aa9.55□□□□□ -0.88
HIF3A-212ENST00000529205 CLVS1Q8IUQ0 354 aaPredicted RBP9.55□□□□□ -0.88
HIF3A-212ENST00000529205 FAM219AQ8IW50 185 aa9.55□□□□□ -0.88
HIF3A-212ENST00000529205 CCDC71LQ8N9Z2 235 aa9.55□□□□□ -0.88
HIF3A-212ENST00000529205 OR52E5Q8NH55 327 aa9.55□□□□□ -0.88
HIF3A-212ENST00000529205 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.55□□□□□ -0.88
HIF3A-212ENST00000529205 KLK11Q9UBX7 282 aa9.55□□□□□ -0.88
HIF3A-212ENST00000529205 M0QYG6 137 aa9.54□□□□□ -0.88
HIF3A-212ENST00000529205 RORCP51449 518 aa9.54□□□□□ -0.88
HIF3A-212ENST00000529205 SLC24A4Q8NFF2 622 aa9.54□□□□□ -0.88
HIF3A-212ENST00000529205 OR51G1Q8NGK1 321 aa9.54□□□□□ -0.88
HIF3A-212ENST00000529205 ZFAND1Q8TCF1 268 aa9.54□□□□□ -0.88
HIF3A-212ENST00000529205 NPIPB3Q92617 1050 aa9.54□□□□□ -0.88
HIF3A-212ENST00000529205 ACY3Q96HD9 319 aa9.54□□□□□ -0.88
HIF3A-212ENST00000529205 PBDC1Q9BVG4 233 aa9.54□□□□□ -0.88
HIF3A-212ENST00000529205 SLC35B3Q9H1N7 401 aa9.54□□□□□ -0.88
HIF3A-212ENST00000529205 CEBPZOSA8MTT3 80 aa9.53□□□□□ -0.88
HIF3A-212ENST00000529205 H3BMQ9 156 aa9.53□□□□□ -0.88
HIF3A-212ENST00000529205 PI3P19957 117 aa9.53□□□□□ -0.88
HIF3A-212ENST00000529205 SP6Q3SY56 376 aa9.53□□□□□ -0.88
HIF3A-212ENST00000529205 RNASE10Q5GAN6 216 aaKnown RBP9.53□□□□□ -0.88
HIF3A-212ENST00000529205 SAMD13Q5VXD3 122 aa9.53□□□□□ -0.88
HIF3A-212ENST00000529205 SNX29P2Q8IUI4 249 aa9.53□□□□□ -0.88
HIF3A-212ENST00000529205 ZNF709Q8N972 641 aa9.53□□□□□ -0.88
HIF3A-212ENST00000529205 RNF125Q96EQ8 232 aa9.53□□□□□ -0.88
HIF3A-212ENST00000529205 CACFD1Q9UGQ2 172 aa9.53□□□□□ -0.88
HIF3A-212ENST00000529205 LYRM9A8MSI8 78 aa9.52□□□□□ -0.89
HIF3A-212ENST00000529205 NUDT3O95989 172 aa9.52□□□□□ -0.89
HIF3A-212ENST00000529205 PSG1P11464 419 aa9.52□□□□□ -0.89
HIF3A-212ENST00000529205 UCP1P25874 307 aa9.52□□□□□ -0.89
HIF3A-212ENST00000529205 ZNF79Q15937 498 aa9.52□□□□□ -0.89
HIF3A-212ENST00000529205 FAM78BQ5VT40 261 aa9.52□□□□□ -0.89
HIF3A-212ENST00000529205 OR8G2PQ6IF36 304 aa9.52□□□□□ -0.89
HIF3A-212ENST00000529205 SPATA12Q7Z6I5 190 aa9.52□□□□□ -0.89
HIF3A-212ENST00000529205 C1orf158Q8N1D5 194 aa9.52□□□□□ -0.89
HIF3A-212ENST00000529205 ARRDC1Q8N5I2 433 aa9.52□□□□□ -0.89
HIF3A-212ENST00000529205 ZNRF2Q8NHG8 242 aa9.52□□□□□ -0.89
HIF3A-212ENST00000529205 RPRMQ9NS64 109 aa9.52□□□□□ -0.89
HIF3A-212ENST00000529205 ISLRO14498 428 aa9.51□□□□□ -0.89
HIF3A-212ENST00000529205 APOA1P02647 267 aa9.51□□□□□ -0.89
HIF3A-212ENST00000529205 FABP1P07148 127 aa9.51□□□□□ -0.89
HIF3A-212ENST00000529205 TMBIM6P55061 237 aa9.51□□□□□ -0.89
HIF3A-212ENST00000529205 PAX9P55771 341 aa9.51□□□□□ -0.89
HIF3A-212ENST00000529205 DEFB1P60022 68 aa9.51□□□□□ -0.89
HIF3A-212ENST00000529205 B2MP61769 119 aa9.51□□□□□ -0.89
HIF3A-212ENST00000529205 CLINT1Q14677 625 aa9.51□□□□□ -0.89
HIF3A-212ENST00000529205 C1orf194Q5T5A4 169 aa9.51□□□□□ -0.89
HIF3A-212ENST00000529205 PPP1R14BQ96C90 147 aa9.51□□□□□ -0.89
HIF3A-212ENST00000529205 ABHD1Q96SE0 405 aa9.51□□□□□ -0.89
HIF3A-212ENST00000529205 COMMD3Q9UBI1 195 aa9.51□□□□□ -0.89
HIF3A-212ENST00000529205 A0A0G2JRQ6 117 aa9.5□□□□□ -0.89
HIF3A-212ENST00000529205 A6NHS1 94 aa9.5□□□□□ -0.89
HIF3A-212ENST00000529205 ZFP92A6NM28 416 aa9.5□□□□□ -0.89
HIF3A-212ENST00000529205 F5H768 121 aa9.5□□□□□ -0.89
HIF3A-212ENST00000529205 DEFB130BP0DP73 79 aa9.5□□□□□ -0.89
HIF3A-212ENST00000529205 DEFB130AP0DP74 79 aa9.5□□□□□ -0.89
HIF3A-212ENST00000529205 MEOX2P50222 304 aa9.5□□□□□ -0.89
HIF3A-212ENST00000529205 SUPT4H1P63272 117 aaKnown RBP9.5□□□□□ -0.89
HIF3A-212ENST00000529205 KLF9Q13886 244 aaPredicted RBP9.5□□□□□ -0.89
HIF3A-212ENST00000529205 AARDQ4LEZ3 155 aa9.5□□□□□ -0.89
HIF3A-212ENST00000529205 LHFPL1Q86WI0 220 aa9.5□□□□□ -0.89
HIF3A-212ENST00000529205 DYNC2LI1Q8TCX1 351 aa9.5□□□□□ -0.89
HIF3A-212ENST00000529205 IGF2BP2-AS1Q96M15 143 aa9.5□□□□□ -0.89
HIF3A-212ENST00000529205 WDR12Q9GZL7 423 aaKnown RBP9.5□□□□□ -0.89
HIF3A-212ENST00000529205 HSPG2P98160 4391 aa9.5□□□□□ -0.89
HIF3A-212ENST00000529205 A0A0J9YX75 114 aa9.49□□□□□ -0.89
HIF3A-212ENST00000529205 GABARAPH6UMI1 98 aa9.49□□□□□ -0.89
HIF3A-212ENST00000529205 CDS2O95674 445 aa9.49□□□□□ -0.89
HIF3A-212ENST00000529205 ATP5G1P05496 136 aa9.49□□□□□ -0.89
HIF3A-212ENST00000529205 TBPP20226 339 aa9.49□□□□□ -0.89
HIF3A-212ENST00000529205 ATP5G3P48201 142 aa9.49□□□□□ -0.89
HIF3A-212ENST00000529205 SCGB2B2Q4G0G5 96 aa9.49□□□□□ -0.89
HIF3A-212ENST00000529205 TTC32Q5I0X7 151 aa9.49□□□□□ -0.89
HIF3A-212ENST00000529205 OR8I2Q8N0Y5 310 aa9.49□□□□□ -0.89
HIF3A-212ENST00000529205 TERB2Q8NHR7 220 aa9.49□□□□□ -0.89
HIF3A-212ENST00000529205 RBPMSQ93062 196 aaKnown RBP9.49□□□□□ -0.89
HIF3A-212ENST00000529205 C16orf92Q96LL3 132 aa9.49□□□□□ -0.89
HIF3A-212ENST00000529205 DOK5Q9P104 306 aa9.49□□□□□ -0.89
HIF3A-212ENST00000529205 CACNG5Q9UF02 275 aa9.49□□□□□ -0.89
HIF3A-212ENST00000529205 NACAE9PAV3 2078 aa9.48□□□□□ -0.89
HIF3A-212ENST00000529205 TEX13DA0A0J9YY54 714 aaPredicted RBP9.48□□□□□ -0.89
HIF3A-212ENST00000529205 SNRPGP15A8MWD9 76 aa9.48□□□□□ -0.89
HIF3A-212ENST00000529205 F6UB75 175 aa9.48□□□□□ -0.89
HIF3A-212ENST00000529205 OR4C16Q8NGL9 310 aa9.48□□□□□ -0.89
HIF3A-212ENST00000529205 RAB2BQ8WUD1 216 aa9.48□□□□□ -0.89
HIF3A-212ENST00000529205 TMEM222Q9H0R3 208 aa9.48□□□□□ -0.89
HIF3A-212ENST00000529205 MIXL1Q9H2W2 232 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms