RNA–Protein interactions for RNA: ENST00000528621.5

CTNND1-219, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-219ENST00000528621 LAGE3Q14657 143 aa6.98□□□□□ -1.29
CTNND1-219ENST00000528621 MESP1Q9BRJ9 268 aa6.98□□□□□ -1.29
CTNND1-219ENST00000528621 GGTLC1Q9BX51 225 aa6.98□□□□□ -1.29
CTNND1-219ENST00000528621 IGKV2-40A0A087WW87 121 aaPredicted RBP6.98□□□□□ -1.29
CTNND1-219ENST00000528621 IGKV3D-20A0A0C4DH25 116 aa6.98□□□□□ -1.29
CTNND1-219ENST00000528621 ADARB2-AS1A8MUL3 147 aa6.98□□□□□ -1.29
CTNND1-219ENST00000528621 IGKV2D-40P01614 121 aaPredicted RBP6.98□□□□□ -1.29
CTNND1-219ENST00000528621 ATRAIDQ6UW56 229 aa6.98□□□□□ -1.29
CTNND1-219ENST00000528621 OCC1Q8TAD7 63 aa6.98□□□□□ -1.29
CTNND1-219ENST00000528621 MGST2Q99735 147 aa6.98□□□□□ -1.29
CTNND1-219ENST00000528621 PRADC1Q9BSG0 188 aa6.98□□□□□ -1.29
CTNND1-219ENST00000528621 CYTL1Q9NRR1 136 aa6.98□□□□□ -1.29
CTNND1-219ENST00000528621 SDK1Q7Z5N4 2213 aa6.98□□□□□ -1.29
CTNND1-219ENST00000528621 B4DSR2 109 aa6.98□□□□□ -1.29
CTNND1-219ENST00000528621 BUB1B-PAK6H3BSN5 160 aa6.98□□□□□ -1.29
CTNND1-219ENST00000528621 HOXA3O43365 443 aaPredicted RBP6.98□□□□□ -1.29
CTNND1-219ENST00000528621 NMSQ5H8A3 153 aa6.98□□□□□ -1.29
CTNND1-219ENST00000528621 TMEM14EPQ6UXP3 125 aa6.98□□□□□ -1.29
CTNND1-219ENST00000528621 C9orf139Q6ZV77 190 aa6.98□□□□□ -1.29
CTNND1-219ENST00000528621 LINC00477Q96M19 166 aa6.98□□□□□ -1.29
CTNND1-219ENST00000528621 LINC00587B1AMM8 73 aa6.98□□□□□ -1.29
CTNND1-219ENST00000528621 NDUFS8O00217 210 aa6.98□□□□□ -1.29
CTNND1-219ENST00000528621 SAP30O75446 220 aa6.98□□□□□ -1.29
CTNND1-219ENST00000528621 GSN-AS1Q9NRJ2 163 aa6.98□□□□□ -1.29
CTNND1-219ENST00000528621 SPCS1Q9Y6A9 102 aa6.98□□□□□ -1.29
CTNND1-219ENST00000528621 URB1O60287 2271 aaKnown RBP6.98□□□□□ -1.29
CTNND1-219ENST00000528621 CCDC88CQ9P219 2028 aa6.98□□□□□ -1.29
CTNND1-219ENST00000528621 TRBV24-1A0A075B6N3 115 aa6.97□□□□□ -1.29
CTNND1-219ENST00000528621 SRD5A1P18405 259 aa6.97□□□□□ -1.29
CTNND1-219ENST00000528621 ERVK11-1P61568 191 aa6.97□□□□□ -1.29
CTNND1-219ENST00000528621 NIT1Q86X76 327 aa6.97□□□□□ -1.29
CTNND1-219ENST00000528621 NCOR1P1Q9H4R4 102 aa6.97□□□□□ -1.29
CTNND1-219ENST00000528621 FOXG1P55316 489 aaPredicted RBP6.97□□□□□ -1.29
CTNND1-219ENST00000528621 BMPERQ8N8U9 685 aa6.97□□□□□ -1.29
CTNND1-219ENST00000528621 SEPSECSQ9HD40 501 aaKnown RBP6.97□□□□□ -1.29
CTNND1-219ENST00000528621 CLDN16Q9Y5I7 305 aa6.97□□□□□ -1.29
CTNND1-219ENST00000528621 A0A1B0GWB2 263 aa6.97□□□□□ -1.29
CTNND1-219ENST00000528621 CDK2AP2O75956 126 aa6.97□□□□□ -1.29
CTNND1-219ENST00000528621 IGHV4-39P01824 125 aa6.97□□□□□ -1.29
CTNND1-219ENST00000528621 C15orf32Q32M92 178 aa6.97□□□□□ -1.29
CTNND1-219ENST00000528621 SPATA31B1PQ5VZV4 182 aa6.97□□□□□ -1.29
CTNND1-219ENST00000528621 EREGO14944 169 aa6.97□□□□□ -1.29
CTNND1-219ENST00000528621 APOMO95445 188 aa6.97□□□□□ -1.29
CTNND1-219ENST00000528621 SUPT4H1P63272 117 aaKnown RBP6.97□□□□□ -1.29
CTNND1-219ENST00000528621 DEFB121Q5J5C9 76 aa6.97□□□□□ -1.29
CTNND1-219ENST00000528621 LINC00469Q8N7U9 141 aa6.97□□□□□ -1.29
CTNND1-219ENST00000528621 RCHY1Q96PM5 261 aa6.97□□□□□ -1.29
CTNND1-219ENST00000528621 SCN5AQ14524 2016 aa6.96□□□□□ -1.29
CTNND1-219ENST00000528621 LHFPL4Q7Z7J7 247 aa6.96□□□□□ -1.29
CTNND1-219ENST00000528621 WFDC12Q8WWY7 111 aa6.96□□□□□ -1.29
CTNND1-219ENST00000528621 RPL15P61313 204 aaKnown RBP6.96□□□□□ -1.3
CTNND1-219ENST00000528621 ZNF415Q09FC8 603 aa6.96□□□□□ -1.3
CTNND1-219ENST00000528621 GFRA4Q9GZZ7 299 aa6.96□□□□□ -1.3
CTNND1-219ENST00000528621 MGAMO43451 1857 aa6.96□□□□□ -1.3
CTNND1-219ENST00000528621 GATA3P23771 443 aa6.96□□□□□ -1.3
CTNND1-219ENST00000528621 PSG3Q16557 428 aa6.96□□□□□ -1.3
CTNND1-219ENST00000528621 TMEM219Q86XT9 240 aa6.96□□□□□ -1.3
CTNND1-219ENST00000528621 LINC01356Q8N9X3 169 aa6.96□□□□□ -1.3
CTNND1-219ENST00000528621 OR9G4Q8NGQ1 327 aa6.96□□□□□ -1.3
CTNND1-219ENST00000528621 PPIFP30405 207 aaKnown RBP6.96□□□□□ -1.3
CTNND1-219ENST00000528621 Q6ZS92 163 aa6.96□□□□□ -1.3
CTNND1-219ENST00000528621 Q8TCH9 128 aa6.96□□□□□ -1.3
CTNND1-219ENST00000528621 PAX2Q02962 417 aa6.95□□□□□ -1.3
CTNND1-219ENST00000528621 C5orf64Q2M2E5 130 aa6.95□□□□□ -1.3
CTNND1-219ENST00000528621 ACTL10Q5JWF8 245 aa6.95□□□□□ -1.3
CTNND1-219ENST00000528621 MORN3Q6PF18 240 aaPredicted RBP6.95□□□□□ -1.3
CTNND1-219ENST00000528621 GLRX5Q86SX6 157 aa6.95□□□□□ -1.3
CTNND1-219ENST00000528621 KIR3DL3Q8N743 410 aa6.95□□□□□ -1.3
CTNND1-219ENST00000528621 SCRT1Q9BWW7 348 aa6.95□□□□□ -1.3
CTNND1-219ENST00000528621 LAMTOR2Q9Y2Q5 125 aa6.95□□□□□ -1.3
CTNND1-219ENST00000528621 LILRA1O75019 489 aa6.95□□□□□ -1.3
CTNND1-219ENST00000528621 PSG1P11464 419 aa6.95□□□□□ -1.3
CTNND1-219ENST00000528621 SH2D1AO60880 128 aa6.95□□□□□ -1.3
CTNND1-219ENST00000528621 HSD52Q0P140 79 aa6.95□□□□□ -1.3
CTNND1-219ENST00000528621 UNQ6494/PRO21346Q6UXR6 183 aa6.95□□□□□ -1.3
CTNND1-219ENST00000528621 TRAV2A0A0B4J234 112 aa6.95□□□□□ -1.3
CTNND1-219ENST00000528621 TCRAP04437 139 aa6.95□□□□□ -1.3
CTNND1-219ENST00000528621 ZNF138P52744 262 aa6.95□□□□□ -1.3
CTNND1-219ENST00000528621 SEC11AP67812 179 aa6.95□□□□□ -1.3
CTNND1-219ENST00000528621 GFI1BQ5VTD9 330 aa6.95□□□□□ -1.3
CTNND1-219ENST00000528621 MRPL52Q86TS9 123 aaKnown RBP6.95□□□□□ -1.3
CTNND1-219ENST00000528621 OR2K2Q8NGT1 345 aa6.95□□□□□ -1.3
CTNND1-219ENST00000528621 PHLDA1Q8WV24 401 aaPredicted RBP6.95□□□□□ -1.3
CTNND1-219ENST00000528621 PLEKHB2Q96CS7 222 aa6.95□□□□□ -1.3
CTNND1-219ENST00000528621 TRAV3A0A0B4J244 114 aa6.95□□□□□ -1.3
CTNND1-219ENST00000528621 PSPNO60542 156 aa6.95□□□□□ -1.3
CTNND1-219ENST00000528621 IGKV1-5P01602 117 aa6.95□□□□□ -1.3
CTNND1-219ENST00000528621 CD33P20138 364 aa6.95□□□□□ -1.3
CTNND1-219ENST00000528621 RNF166Q96A37 237 aaPredicted RBP6.95□□□□□ -1.3
CTNND1-219ENST00000528621 LINC00527Q9UJ94 153 aa6.95□□□□□ -1.3
CTNND1-219ENST00000528621 SPAG17Q6Q759 2223 aa6.94□□□□□ -1.3
CTNND1-219ENST00000528621 ETV2O00321 342 aaPredicted RBP6.94□□□□□ -1.3
CTNND1-219ENST00000528621 CA1P00915 261 aaPredicted RBP6.94□□□□□ -1.3
CTNND1-219ENST00000528621 PLNP26678 52 aa6.94□□□□□ -1.3
CTNND1-219ENST00000528621 ORAOV1Q8WV07 137 aa6.94□□□□□ -1.3
CTNND1-219ENST00000528621 NDUFAF3Q9BU61 184 aa6.94□□□□□ -1.3
CTNND1-219ENST00000528621 MYO9BQ13459 2157 aa6.94□□□□□ -1.3
CTNND1-219ENST00000528621 TSC2P49815 1807 aa6.94□□□□□ -1.3
CTNND1-219ENST00000528621 A0A1B0GV72 72 aa6.94□□□□□ -1.3
CTNND1-219ENST00000528621 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms