RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 Q6ZRM9 215 aa4.72□□□□□ -1.65
CD44-225ENST00000527326 MOB3BQ86TA1 216 aa4.72□□□□□ -1.65
CD44-225ENST00000527326 SFTPA2Q8IWL1 248 aa4.72□□□□□ -1.65
CD44-225ENST00000527326 SFTPA1Q8IWL2 248 aa4.72□□□□□ -1.65
CD44-225ENST00000527326 ZDHHC23Q8IYP9 409 aa4.72□□□□□ -1.65
CD44-225ENST00000527326 BCORP1Q8N888 145 aa4.72□□□□□ -1.65
CD44-225ENST00000527326 FADS6Q8N9I5 356 aa4.72□□□□□ -1.65
CD44-225ENST00000527326 MAFAQ8NHW3 353 aaPredicted RBP4.72□□□□□ -1.65
CD44-225ENST00000527326 ST8SIA1Q92185 356 aa4.72□□□□□ -1.65
CD44-225ENST00000527326 COQ2Q96H96 371 aa4.72□□□□□ -1.65
CD44-225ENST00000527326 TMEM101Q96IK0 257 aa4.72□□□□□ -1.65
CD44-225ENST00000527326 PRADC1Q9BSG0 188 aa4.72□□□□□ -1.65
CD44-225ENST00000527326 SLC25A2Q9BXI2 301 aa4.72□□□□□ -1.65
CD44-225ENST00000527326 HEYLQ9NQ87 328 aaPredicted RBP4.72□□□□□ -1.65
CD44-225ENST00000527326 LSM7Q9UK45 103 aaKnown RBP4.72□□□□□ -1.65
CD44-225ENST00000527326 PIGLQ9Y2B2 252 aa4.72□□□□□ -1.65
CD44-225ENST00000527326 WNT6Q9Y6F9 365 aa4.72□□□□□ -1.65
CD44-225ENST00000527326 IGKV1D-13A0A0B4J2D9 117 aa4.71□□□□□ -1.66
CD44-225ENST00000527326 OOEPA6NGQ2 149 aa4.71□□□□□ -1.66
CD44-225ENST00000527326 A8MWV9 139 aa4.71□□□□□ -1.66
CD44-225ENST00000527326 ZIC3O60481 467 aa4.71□□□□□ -1.66
CD44-225ENST00000527326 DUSP14O95147 198 aaKnown RBP4.71□□□□□ -1.66
CD44-225ENST00000527326 NDUFA7O95182 113 aa4.71□□□□□ -1.66
CD44-225ENST00000527326 IGKV1-5P01602 117 aa4.71□□□□□ -1.66
CD44-225ENST00000527326 IGLV2-8P01709 118 aa4.71□□□□□ -1.66
CD44-225ENST00000527326 CISD3P0C7P0 127 aa4.71□□□□□ -1.66
CD44-225ENST00000527326 IGKV1-13P0DP09 117 aa4.71□□□□□ -1.66
CD44-225ENST00000527326 GP1BBP13224 206 aa4.71□□□□□ -1.66
CD44-225ENST00000527326 BCL3P20749 454 aa4.71□□□□□ -1.66
CD44-225ENST00000527326 ACP1P24666 158 aa4.71□□□□□ -1.66
CD44-225ENST00000527326 CD27P26842 260 aa4.71□□□□□ -1.66
CD44-225ENST00000527326 CTGFP29279 349 aa4.71□□□□□ -1.66
CD44-225ENST00000527326 CD70P32970 193 aa4.71□□□□□ -1.66
CD44-225ENST00000527326 NMUP48645 174 aa4.71□□□□□ -1.66
CD44-225ENST00000527326 SLURP1P55000 103 aa4.71□□□□□ -1.66
CD44-225ENST00000527326 DLX6P56179 175 aa4.71□□□□□ -1.66
CD44-225ENST00000527326 DSCR4P56555 118 aaPredicted RBP4.71□□□□□ -1.66
CD44-225ENST00000527326 SRYQ05066 204 aa4.71□□□□□ -1.66
CD44-225ENST00000527326 NUMA1Q14980 2115 aa4.71□□□□□ -1.66
CD44-225ENST00000527326 ANXA2RQ3ZCQ2 193 aa4.71□□□□□ -1.66
CD44-225ENST00000527326 Q8N7P7 452 aa4.71□□□□□ -1.66
CD44-225ENST00000527326 OR1L4Q8NGR5 311 aa4.71□□□□□ -1.66
CD44-225ENST00000527326 TMEM158Q8WZ71 300 aa4.71□□□□□ -1.66
CD44-225ENST00000527326 RND1Q92730 232 aa4.71□□□□□ -1.66
CD44-225ENST00000527326 TM4SF19Q96DZ7 209 aa4.71□□□□□ -1.66
CD44-225ENST00000527326 CARD19Q96LW7 228 aa4.71□□□□□ -1.66
CD44-225ENST00000527326 DUX3Q96PT4 197 aa4.71□□□□□ -1.66
CD44-225ENST00000527326 KIR2DL4Q99706 377 aa4.71□□□□□ -1.66
CD44-225ENST00000527326 NUDT22Q9BRQ3 303 aa4.71□□□□□ -1.66
CD44-225ENST00000527326 OR2H1Q9GZK4 316 aa4.71□□□□□ -1.66
CD44-225ENST00000527326 FAM234AQ9H0X4 552 aa4.71□□□□□ -1.66
CD44-225ENST00000527326 ZNF442Q9H7R0 627 aa4.71□□□□□ -1.66
CD44-225ENST00000527326 CDH23Q9H251 3354 aa4.71□□□□□ -1.66
CD44-225ENST00000527326 CACNA1AO00555 2505 aa4.71□□□□□ -1.66
CD44-225ENST00000527326 TRAV24A0A0B4J272 114 aa4.7□□□□□ -1.66
CD44-225ENST00000527326 C15orf62A8K5M9 175 aa4.7□□□□□ -1.66
CD44-225ENST00000527326 NPIPB11E5RHQ5 1161 aa4.7□□□□□ -1.66
CD44-225ENST00000527326 RRHO14718 337 aa4.7□□□□□ -1.66
CD44-225ENST00000527326 MGST3O14880 152 aa4.7□□□□□ -1.66
CD44-225ENST00000527326 CRLF1O75462 422 aa4.7□□□□□ -1.66
CD44-225ENST00000527326 TNFRSF6BO95407 300 aa4.7□□□□□ -1.66
CD44-225ENST00000527326 CLDN14O95500 239 aa4.7□□□□□ -1.66
CD44-225ENST00000527326 NCR2O95944 276 aa4.7□□□□□ -1.66
CD44-225ENST00000527326 IGKV1-39P01597 117 aa4.7□□□□□ -1.66
CD44-225ENST00000527326 IGKV1D-39P04432 117 aa4.7□□□□□ -1.66
CD44-225ENST00000527326 IL4P05112 153 aa4.7□□□□□ -1.66
CD44-225ENST00000527326 CAMPP49913 170 aa4.7□□□□□ -1.66
CD44-225ENST00000527326 EDDM3BP56851 147 aa4.7□□□□□ -1.66
CD44-225ENST00000527326 RBM11P57052 281 aaKnown RBP4.7□□□□□ -1.66
CD44-225ENST00000527326 UTF1Q5T230 341 aa4.7□□□□□ -1.66
CD44-225ENST00000527326 RHBDD2Q6NTF9 364 aa4.7□□□□□ -1.66
CD44-225ENST00000527326 AMTNQ6UX39 209 aa4.7□□□□□ -1.66
CD44-225ENST00000527326 VN1R4Q7Z5H5 301 aa4.7□□□□□ -1.66
CD44-225ENST00000527326 OR11H6Q8NGC7 330 aa4.7□□□□□ -1.66
CD44-225ENST00000527326 OR1L8Q8NGR8 309 aa4.7□□□□□ -1.66
CD44-225ENST00000527326 AJUBAQ96IF1 538 aa4.7□□□□□ -1.66
CD44-225ENST00000527326 ZNF414Q96IQ9 312 aa4.7□□□□□ -1.66
CD44-225ENST00000527326 BMFQ96LC9 184 aa4.7□□□□□ -1.66
CD44-225ENST00000527326 ASCL2Q99929 193 aa4.7□□□□□ -1.66
CD44-225ENST00000527326 GFRA4Q9GZZ7 299 aa4.7□□□□□ -1.66
CD44-225ENST00000527326 PLA2G2DQ9UNK4 145 aa4.7□□□□□ -1.66
CD44-225ENST00000527326 TCF19Q9Y242 345 aa4.7□□□□□ -1.66
CD44-225ENST00000527326 F11RQ9Y624 299 aaKnown RBP4.7□□□□□ -1.66
CD44-225ENST00000527326 THADAQ6YHU6 1953 aa4.69□□□□□ -1.66
CD44-225ENST00000527326 PCNX3Q9H6A9 2034 aa4.69□□□□□ -1.66
CD44-225ENST00000527326 TRBV6-6A0A0A6YYG2 114 aa4.69□□□□□ -1.66
CD44-225ENST00000527326 TRAV4A0A0B4J268 109 aa4.69□□□□□ -1.66
CD44-225ENST00000527326 C5orf49A4QMS7 147 aa4.69□□□□□ -1.66
CD44-225ENST00000527326 HIGD1CA8MV81 97 aa4.69□□□□□ -1.66
CD44-225ENST00000527326 CHEK1O14757 476 aa4.69□□□□□ -1.66
CD44-225ENST00000527326 ATP5G1P05496 136 aa4.69□□□□□ -1.66
CD44-225ENST00000527326 CRYGDP07320 174 aa4.69□□□□□ -1.66
CD44-225ENST00000527326 SCGB1C2P0DMR2 95 aa4.69□□□□□ -1.66
CD44-225ENST00000527326 MYF5P13349 255 aa4.69□□□□□ -1.66
CD44-225ENST00000527326 FOXA3P55318 350 aaPredicted RBP4.69□□□□□ -1.66
CD44-225ENST00000527326 PMVKQ15126 192 aa4.69□□□□□ -1.66
CD44-225ENST00000527326 CST6Q15828 149 aa4.69□□□□□ -1.66
CD44-225ENST00000527326 ZNF77Q15935 545 aa4.69□□□□□ -1.66
CD44-225ENST00000527326 DEFB134Q4QY38 66 aa4.69□□□□□ -1.66
CD44-225ENST00000527326 C9orf153Q5TBE3 101 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms