RNA–Protein interactions for RNA: ENST00000526653.1

SF3B2-205, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-205ENST00000526653 SNAPC5O75971 98 aa3.57□□□□□ -1.84
SF3B2-205ENST00000526653 TNFRSF6BO95407 300 aa3.57□□□□□ -1.84
SF3B2-205ENST00000526653 HPRT1P00492 218 aa3.57□□□□□ -1.84
SF3B2-205ENST00000526653 KRASP01116 189 aa3.57□□□□□ -1.84
SF3B2-205ENST00000526653 MT1HL1P0DM35 61 aa3.57□□□□□ -1.84
SF3B2-205ENST00000526653 M6PRP20645 277 aa3.57□□□□□ -1.84
SF3B2-205ENST00000526653 NKX2-1P43699 371 aaPredicted RBP3.57□□□□□ -1.84
SF3B2-205ENST00000526653 CLDN12P56749 244 aa3.57□□□□□ -1.84
SF3B2-205ENST00000526653 TAS2R31P59538 309 aa3.57□□□□□ -1.84
SF3B2-205ENST00000526653 ST3GAL4Q11206 333 aa3.57□□□□□ -1.84
SF3B2-205ENST00000526653 SSX1Q16384 188 aa3.57□□□□□ -1.84
SF3B2-205ENST00000526653 C2orf76Q3KRA6 126 aa3.57□□□□□ -1.84
SF3B2-205ENST00000526653 FAM78BQ5VT40 261 aa3.57□□□□□ -1.84
SF3B2-205ENST00000526653 TMEM268Q5VZI3 342 aa3.57□□□□□ -1.84
SF3B2-205ENST00000526653 C16orf54Q6UWD8 224 aa3.57□□□□□ -1.84
SF3B2-205ENST00000526653 TPRA1Q86W33 373 aa3.57□□□□□ -1.84
SF3B2-205ENST00000526653 OR56B1Q8NGI3 324 aa3.57□□□□□ -1.84
SF3B2-205ENST00000526653 TMEM56Q96MV1 263 aa3.57□□□□□ -1.84
SF3B2-205ENST00000526653 SAV1Q9H4B6 383 aaPredicted RBP3.57□□□□□ -1.84
SF3B2-205ENST00000526653 PLGRKTQ9HBL7 147 aa3.57□□□□□ -1.84
SF3B2-205ENST00000526653 ZNF446Q9NWS9 450 aa3.57□□□□□ -1.84
SF3B2-205ENST00000526653 ELF5Q9UKW6 265 aaPredicted RBP3.57□□□□□ -1.84
SF3B2-205ENST00000526653 POMPQ9Y244 141 aa3.57□□□□□ -1.84
SF3B2-205ENST00000526653 FAT4Q6V0I7 4981 aa3.56□□□□□ -1.84
SF3B2-205ENST00000526653 TRAV9-2A0A087WT02 112 aa3.56□□□□□ -1.84
SF3B2-205ENST00000526653 PRAC2D3DTV9 90 aa3.56□□□□□ -1.84
SF3B2-205ENST00000526653 MFNGO00587 321 aa3.56□□□□□ -1.84
SF3B2-205ENST00000526653 NXPH4O95158 308 aa3.56□□□□□ -1.84
SF3B2-205ENST00000526653 DIRAS3O95661 229 aa3.56□□□□□ -1.84
SF3B2-205ENST00000526653 MYL12AP19105 171 aa3.56□□□□□ -1.84
SF3B2-205ENST00000526653 PAX9P55771 341 aa3.56□□□□□ -1.84
SF3B2-205ENST00000526653 THOC7Q6I9Y2 204 aaKnown RBP3.56□□□□□ -1.84
SF3B2-205ENST00000526653 OR51H1Q8NH63 302 aa3.56□□□□□ -1.84
SF3B2-205ENST00000526653 SECTM1Q8WVN6 248 aa3.56□□□□□ -1.84
SF3B2-205ENST00000526653 ABHD1Q96SE0 405 aa3.56□□□□□ -1.84
SF3B2-205ENST00000526653 LINC01587Q99440 93 aa3.56□□□□□ -1.84
SF3B2-205ENST00000526653 CENPOQ9BU64 300 aa3.56□□□□□ -1.84
SF3B2-205ENST00000526653 NRN1Q9NPD7 142 aa3.56□□□□□ -1.84
SF3B2-205ENST00000526653 NOP10Q9NPE3 64 aaKnown RBP3.56□□□□□ -1.84
SF3B2-205ENST00000526653 AK6Q9Y3D8 172 aaKnown RBP3.56□□□□□ -1.84
SF3B2-205ENST00000526653 AP4S1Q9Y587 144 aa3.56□□□□□ -1.84
SF3B2-205ENST00000526653 ORC6Q9Y5N6 252 aa3.56□□□□□ -1.84
SF3B2-205ENST00000526653 A0A096LPF7 62 aa3.55□□□□□ -1.84
SF3B2-205ENST00000526653 PLAC8L1A1L4L8 177 aa3.55□□□□□ -1.84
SF3B2-205ENST00000526653 LRCOL1A6NCL2 159 aa3.55□□□□□ -1.84
SF3B2-205ENST00000526653 PSCAO43653 123 aa3.55□□□□□ -1.84
SF3B2-205ENST00000526653 IGLV2-8P01709 118 aa3.55□□□□□ -1.84
SF3B2-205ENST00000526653 C1QBP02746 253 aa3.55□□□□□ -1.84
SF3B2-205ENST00000526653 CTXN2P0C2S0 81 aa3.55□□□□□ -1.84
SF3B2-205ENST00000526653 PTHLHP12272 177 aa3.55□□□□□ -1.84
SF3B2-205ENST00000526653 CALB2P22676 271 aa3.55□□□□□ -1.84
SF3B2-205ENST00000526653 UCP1P25874 307 aa3.55□□□□□ -1.84
SF3B2-205ENST00000526653 MAPK3P27361 379 aaPredicted RBP3.55□□□□□ -1.84
SF3B2-205ENST00000526653 G6PCP35575 357 aa3.55□□□□□ -1.84
SF3B2-205ENST00000526653 LPAR6P43657 344 aa3.55□□□□□ -1.84
SF3B2-205ENST00000526653 RORCP51449 518 aa3.55□□□□□ -1.84
SF3B2-205ENST00000526653 HNRNPA3P51991 378 aaKnown RBP3.55□□□□□ -1.84
SF3B2-205ENST00000526653 ERVK-16P61578 105 aa3.55□□□□□ -1.84
SF3B2-205ENST00000526653 RAB11BQ15907 218 aa3.55□□□□□ -1.84
SF3B2-205ENST00000526653 ZNF79Q15937 498 aa3.55□□□□□ -1.84
SF3B2-205ENST00000526653 POU2AF1Q16633 256 aa3.55□□□□□ -1.84
SF3B2-205ENST00000526653 TIGITQ495A1 244 aa3.55□□□□□ -1.84
SF3B2-205ENST00000526653 KCTD21Q4G0X4 260 aa3.55□□□□□ -1.84
SF3B2-205ENST00000526653 LINC01620Q4KN68 170 aa3.55□□□□□ -1.84
SF3B2-205ENST00000526653 EBLN2Q6P2I7 272 aa3.55□□□□□ -1.84
SF3B2-205ENST00000526653 FOXI2Q6ZQN5 318 aa3.55□□□□□ -1.84
SF3B2-205ENST00000526653 TMED4Q7Z7H5 227 aa3.55□□□□□ -1.84
SF3B2-205ENST00000526653 ZNF485Q8NCK3 441 aa3.55□□□□□ -1.84
SF3B2-205ENST00000526653 OR13F1Q8NGS4 319 aa3.55□□□□□ -1.84
SF3B2-205ENST00000526653 OR10R2Q8NGX6 335 aa3.55□□□□□ -1.84
SF3B2-205ENST00000526653 COQ8AQ8NI60 647 aa3.55□□□□□ -1.84
SF3B2-205ENST00000526653 FAM3DQ96BQ1 224 aa3.55□□□□□ -1.84
SF3B2-205ENST00000526653 IGF2BP2-AS1Q96M15 143 aa3.55□□□□□ -1.84
SF3B2-205ENST00000526653 WDR12Q9GZL7 423 aaKnown RBP3.55□□□□□ -1.84
SF3B2-205ENST00000526653 PLEKHA2Q9HB19 425 aa3.55□□□□□ -1.84
SF3B2-205ENST00000526653 DNAJC4Q9NNZ3 241 aa3.55□□□□□ -1.84
SF3B2-205ENST00000526653 MRPL36Q9P0J6 103 aaKnown RBP3.55□□□□□ -1.84
SF3B2-205ENST00000526653 KLK11Q9UBX7 282 aa3.55□□□□□ -1.84
SF3B2-205ENST00000526653 TIMM8BQ9Y5J9 83 aaPredicted RBP3.55□□□□□ -1.84
SF3B2-205ENST00000526653 TRAV12-2A0A075B6T6 113 aa3.54□□□□□ -1.84
SF3B2-205ENST00000526653 M0R2Z0 102 aa3.54□□□□□ -1.84
SF3B2-205ENST00000526653 GYG2O15488 501 aa3.54□□□□□ -1.84
SF3B2-205ENST00000526653 RS1O15537 224 aa3.54□□□□□ -1.84
SF3B2-205ENST00000526653 RBFOX2O43251 390 aaKnown RBP eCLIP3.54□□□□□ -1.84
SF3B2-205ENST00000526653 GAGE7O76087 117 aa3.54□□□□□ -1.84
SF3B2-205ENST00000526653 GAGE12FP0CL80 117 aa3.54□□□□□ -1.84
SF3B2-205ENST00000526653 GAGE12GP0CL81 117 aa3.54□□□□□ -1.84
SF3B2-205ENST00000526653 GAGE12IP0CL82 117 aa3.54□□□□□ -1.84
SF3B2-205ENST00000526653 HIST1H1DP16402 221 aaKnown RBP3.54□□□□□ -1.84
SF3B2-205ENST00000526653 ELK1P19419 428 aa3.54□□□□□ -1.84
SF3B2-205ENST00000526653 GADD45AP24522 165 aa3.54□□□□□ -1.84
SF3B2-205ENST00000526653 TSPOP30536 169 aa3.54□□□□□ -1.84
SF3B2-205ENST00000526653 FCGR2CP31995 323 aa3.54□□□□□ -1.84
SF3B2-205ENST00000526653 SNCAP37840 140 aa3.54□□□□□ -1.84
SF3B2-205ENST00000526653 ID1P41134 155 aa3.54□□□□□ -1.84
SF3B2-205ENST00000526653 ERHP84090 104 aaKnown RBP3.54□□□□□ -1.84
SF3B2-205ENST00000526653 DHODHQ02127 395 aa3.54□□□□□ -1.84
SF3B2-205ENST00000526653 SPINK13Q1W4C9 94 aa3.54□□□□□ -1.84
SF3B2-205ENST00000526653 CDNFQ49AH0 187 aa3.54□□□□□ -1.84
SF3B2-205ENST00000526653 HSD17B12Q53GQ0 312 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms