RNA–Protein interactions for RNA: ENST00000526054.5

VPS28-204, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 892 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-204ENST00000526054 CBLN1P23435 193 aa7.65□□□□□ -1.18
VPS28-204ENST00000526054 BMI1P35226 326 aa7.65□□□□□ -1.18
VPS28-204ENST00000526054 CAV2P51636 162 aa7.65□□□□□ -1.18
VPS28-204ENST00000526054 PAX9P55771 341 aa7.65□□□□□ -1.18
VPS28-204ENST00000526054 YPEL3P61236 119 aaPredicted RBP7.65□□□□□ -1.18
VPS28-204ENST00000526054 AKR1C1Q04828 323 aa7.65□□□□□ -1.18
VPS28-204ENST00000526054 IL15RAQ13261 267 aa7.65□□□□□ -1.18
VPS28-204ENST00000526054 GAMTQ14353 236 aa7.65□□□□□ -1.18
VPS28-204ENST00000526054 LRRC37A5PQ49AS3 106 aa7.65□□□□□ -1.18
VPS28-204ENST00000526054 TM4SF20Q53R12 229 aa7.65□□□□□ -1.18
VPS28-204ENST00000526054 OR8G2PQ6IF36 304 aa7.65□□□□□ -1.18
VPS28-204ENST00000526054 LCN12Q6JVE5 192 aa7.65□□□□□ -1.18
VPS28-204ENST00000526054 TOMM20LQ6UXN7 152 aa7.65□□□□□ -1.18
VPS28-204ENST00000526054 ACOT7LQ6ZUV0 252 aa7.65□□□□□ -1.18
VPS28-204ENST00000526054 GTSCR1Q86UQ5 136 aa7.65□□□□□ -1.18
VPS28-204ENST00000526054 Q8N1Y9 231 aa7.65□□□□□ -1.18
VPS28-204ENST00000526054 OR10P1Q8NGE3 313 aa7.65□□□□□ -1.18
VPS28-204ENST00000526054 THAP6Q8TBB0 222 aa7.65□□□□□ -1.18
VPS28-204ENST00000526054 WDR89Q96FK6 387 aaPredicted RBP7.65□□□□□ -1.18
VPS28-204ENST00000526054 SPATA25Q9BR10 227 aa7.65□□□□□ -1.18
VPS28-204ENST00000526054 C19orf73Q9NVV2 129 aa7.65□□□□□ -1.18
VPS28-204ENST00000526054 PUS1Q9Y606 427 aaKnown RBP eCLIP7.65□□□□□ -1.18
VPS28-204ENST00000526054 IGHV3OR16-8A0A075B7F1 116 aa7.64□□□□□ -1.19
VPS28-204ENST00000526054 SMCO3A2RU48 225 aa7.64□□□□□ -1.19
VPS28-204ENST00000526054 PRSS46E5RG02 174 aa7.64□□□□□ -1.19
VPS28-204ENST00000526054 BOLA2-SMG1P6H3BVE0 249 aa7.64□□□□□ -1.19
VPS28-204ENST00000526054 ZNF207O43670 478 aaKnown RBP7.64□□□□□ -1.19
VPS28-204ENST00000526054 DEDDO75618 318 aa7.64□□□□□ -1.19
VPS28-204ENST00000526054 MPC2O95563 127 aa7.64□□□□□ -1.19
VPS28-204ENST00000526054 TOMM40O96008 361 aa7.64□□□□□ -1.19
VPS28-204ENST00000526054 C8orf88P0DMB2 117 aa7.64□□□□□ -1.19
VPS28-204ENST00000526054 EIF2B2P49770 351 aaKnown RBP7.64□□□□□ -1.19
VPS28-204ENST00000526054 DLK1P80370 383 aa7.64□□□□□ -1.19
VPS28-204ENST00000526054 ADAMTSL5Q6ZMM2 481 aa7.64□□□□□ -1.19
VPS28-204ENST00000526054 STX12Q86Y82 276 aa7.64□□□□□ -1.19
VPS28-204ENST00000526054 Q8WTZ3 238 aa7.64□□□□□ -1.19
VPS28-204ENST00000526054 HYLS1Q96M11 299 aa7.64□□□□□ -1.19
VPS28-204ENST00000526054 ZFAND3Q9H8U3 227 aa7.64□□□□□ -1.19
VPS28-204ENST00000526054 EDA2RQ9HAV5 297 aa7.64□□□□□ -1.19
VPS28-204ENST00000526054 LYRM2Q9NU23 88 aaPredicted RBP7.64□□□□□ -1.19
VPS28-204ENST00000526054 FXYD6-FXYD2A0A087WZ82 144 aa7.63□□□□□ -1.19
VPS28-204ENST00000526054 TRAV14DV4A0A0A6YYC5 116 aa7.63□□□□□ -1.19
VPS28-204ENST00000526054 IGHV7-4-1A0A0J9YVY3 117 aa7.63□□□□□ -1.19
VPS28-204ENST00000526054 PMS2P5A8MQ11 134 aa7.63□□□□□ -1.19
VPS28-204ENST00000526054 E5RGE8 158 aa7.63□□□□□ -1.19
VPS28-204ENST00000526054 FNDC10F2Z333 226 aa7.63□□□□□ -1.19
VPS28-204ENST00000526054 G3V3Q6 166 aa7.63□□□□□ -1.19
VPS28-204ENST00000526054 RD3LP0DJH9 198 aa7.63□□□□□ -1.19
VPS28-204ENST00000526054 EDN2P20800 178 aa7.63□□□□□ -1.19
VPS28-204ENST00000526054 DEFB114Q30KQ6 69 aa7.63□□□□□ -1.19
VPS28-204ENST00000526054 CD300EQ496F6 205 aaPredicted RBP7.63□□□□□ -1.19
VPS28-204ENST00000526054 BTNL8Q6UX41 500 aa7.63□□□□□ -1.19
VPS28-204ENST00000526054 THAP8Q8NA92 274 aa7.63□□□□□ -1.19
VPS28-204ENST00000526054 NARS2Q96I59 477 aaKnown RBP7.63□□□□□ -1.19
VPS28-204ENST00000526054 ZNF414Q96IQ9 312 aa7.63□□□□□ -1.19
VPS28-204ENST00000526054 METTL26Q96S19 204 aa7.63□□□□□ -1.19
VPS28-204ENST00000526054 TRGV9Q99603 122 aa7.63□□□□□ -1.19
VPS28-204ENST00000526054 C11orf1Q9H5F2 150 aa7.63□□□□□ -1.19
VPS28-204ENST00000526054 TMEM231Q9H6L2 316 aa7.63□□□□□ -1.19
VPS28-204ENST00000526054 TRAV25A0A0B4J276 109 aa7.62□□□□□ -1.19
VPS28-204ENST00000526054 FAM24AA6NFZ4 105 aa7.62□□□□□ -1.19
VPS28-204ENST00000526054 IL4P05112 153 aa7.62□□□□□ -1.19
VPS28-204ENST00000526054 SULT1A1P50225 295 aa7.62□□□□□ -1.19
VPS28-204ENST00000526054 HBG1P69891 147 aa7.62□□□□□ -1.19
VPS28-204ENST00000526054 HBG2P69892 147 aa7.62□□□□□ -1.19
VPS28-204ENST00000526054 HAGHQ16775 308 aa7.62□□□□□ -1.19
VPS28-204ENST00000526054 Q5BKY6 102 aa7.62□□□□□ -1.19
VPS28-204ENST00000526054 LAMTOR1Q6IAA8 161 aa7.62□□□□□ -1.19
VPS28-204ENST00000526054 TMEM144Q7Z5S9 345 aa7.62□□□□□ -1.19
VPS28-204ENST00000526054 OR51G1Q8NGK1 321 aa7.62□□□□□ -1.19
VPS28-204ENST00000526054 GGACTQ9BVM4 153 aa7.62□□□□□ -1.19
VPS28-204ENST00000526054 SLC25A31Q9H0C2 315 aa7.62□□□□□ -1.19
VPS28-204ENST00000526054 TUBA4BQ9H853 241 aa7.62□□□□□ -1.19
VPS28-204ENST00000526054 MBD2Q9UBB5 411 aa7.62□□□□□ -1.19
VPS28-204ENST00000526054 MLXQ9UH92 298 aa7.62□□□□□ -1.19
VPS28-204ENST00000526054 SMPXQ9UHP9 88 aa7.62□□□□□ -1.19
VPS28-204ENST00000526054 IGKV1D-37A0A075B6S9 117 aa7.61□□□□□ -1.19
VPS28-204ENST00000526054 A0A1W2PS18 150 aa7.61□□□□□ -1.19
VPS28-204ENST00000526054 HMSDA8MTL9 139 aa7.61□□□□□ -1.19
VPS28-204ENST00000526054 CHEK1O14757 476 aa7.61□□□□□ -1.19
VPS28-204ENST00000526054 ARPC5O15511 151 aa7.61□□□□□ -1.19
VPS28-204ENST00000526054 CST7O76096 145 aa7.61□□□□□ -1.19
VPS28-204ENST00000526054 CFDP00746 253 aaPredicted RBP7.61□□□□□ -1.19
VPS28-204ENST00000526054 PSG1P11464 419 aa7.61□□□□□ -1.19
VPS28-204ENST00000526054 NPPCP23582 126 aa7.61□□□□□ -1.19
VPS28-204ENST00000526054 NUP62P37198 522 aaPredicted RBP7.61□□□□□ -1.19
VPS28-204ENST00000526054 P2RY1P47900 373 aa7.61□□□□□ -1.19
VPS28-204ENST00000526054 SLC38A11Q08AI6 406 aa7.61□□□□□ -1.19
VPS28-204ENST00000526054 GUCA2BQ16661 112 aa7.61□□□□□ -1.19
VPS28-204ENST00000526054 RBPMS2Q6ZRY4 209 aaKnown RBP7.61□□□□□ -1.19
VPS28-204ENST00000526054 ZNF546Q86UE3 836 aa7.61□□□□□ -1.19
VPS28-204ENST00000526054 TMEM61Q8N0U2 210 aa7.61□□□□□ -1.19
VPS28-204ENST00000526054 LILRB2Q8N423 598 aa7.61□□□□□ -1.19
VPS28-204ENST00000526054 TMEM252Q8N6L7 170 aa7.61□□□□□ -1.19
VPS28-204ENST00000526054 INO80EQ8NBZ0 244 aaPredicted RBP7.61□□□□□ -1.19
VPS28-204ENST00000526054 GRAMD2BQ96HH9 432 aa7.61□□□□□ -1.19
VPS28-204ENST00000526054 RHPN1-AS1Q9BWJ2 59 aa7.61□□□□□ -1.19
VPS28-204ENST00000526054 NPVFQ9HCQ7 196 aa7.61□□□□□ -1.19
VPS28-204ENST00000526054 OR5AC2Q9NZP5 309 aa7.61□□□□□ -1.19
VPS28-204ENST00000526054 PFDN2Q9UHV9 154 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms