RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 CREBL2O60519 120 aaPredicted RBP2.11□□□□□ -2.07
CSDE1-211ENST00000525970 ATG12O94817 140 aa2.11□□□□□ -2.07
CSDE1-211ENST00000525970 DEFA4P12838 97 aa2.11□□□□□ -2.07
CSDE1-211ENST00000525970 CASP1P29466 404 aa2.11□□□□□ -2.07
CSDE1-211ENST00000525970 ERP29P30040 261 aaKnown RBP2.11□□□□□ -2.07
CSDE1-211ENST00000525970 CRYBA4P53673 196 aa2.11□□□□□ -2.07
CSDE1-211ENST00000525970 EMP1P54849 157 aa2.11□□□□□ -2.07
CSDE1-211ENST00000525970 TPRXLQ17RH7 258 aa2.11□□□□□ -2.07
CSDE1-211ENST00000525970 ZNF791Q3KP31 576 aaPredicted RBP2.11□□□□□ -2.07
CSDE1-211ENST00000525970 SPANXN3Q5MJ09 141 aa2.11□□□□□ -2.07
CSDE1-211ENST00000525970 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.11□□□□□ -2.07
CSDE1-211ENST00000525970 BORCS5Q969J3 196 aa2.11□□□□□ -2.07
CSDE1-211ENST00000525970 GINS3Q9BRX5 216 aa2.11□□□□□ -2.07
CSDE1-211ENST00000525970 CHST6Q9GZX3 395 aa2.11□□□□□ -2.07
CSDE1-211ENST00000525970 FAIMQ9NVQ4 179 aa2.11□□□□□ -2.07
CSDE1-211ENST00000525970 NDUFB11Q9NX14 153 aa2.11□□□□□ -2.07
CSDE1-211ENST00000525970 TVP23BQ9NYZ1 205 aa2.11□□□□□ -2.07
CSDE1-211ENST00000525970 RPL26L1Q9UNX3 145 aaKnown RBP2.11□□□□□ -2.07
CSDE1-211ENST00000525970 ECM29Q5VYK3 1845 aa2.11□□□□□ -2.07
CSDE1-211ENST00000525970 FAM208AQ9UK61 1670 aaKnown RBP2.11□□□□□ -2.07
CSDE1-211ENST00000525970 TULP4Q9NRJ4 1543 aa2.11□□□□□ -2.07
CSDE1-211ENST00000525970 RTL9Q8NET4 1388 aa2.1□□□□□ -2.07
CSDE1-211ENST00000525970 N4BP2Q86UW6 1770 aaPredicted RBP2.1□□□□□ -2.07
CSDE1-211ENST00000525970 ZCCHC11Q5TAX3 1644 aaKnown RBP2.1□□□□□ -2.07
CSDE1-211ENST00000525970 ZNF609O15014 1411 aa2.1□□□□□ -2.07
CSDE1-211ENST00000525970 MROH2AA6NES4 1674 aa2.1□□□□□ -2.07
CSDE1-211ENST00000525970 TRBV19A0A075B6N1 114 aa2.1□□□□□ -2.07
CSDE1-211ENST00000525970 C19orf84I3L1E1 186 aa2.1□□□□□ -2.07
CSDE1-211ENST00000525970 KPNA4O00629 521 aaPredicted RBP2.1□□□□□ -2.07
CSDE1-211ENST00000525970 SMIM17P0DL12 118 aa2.1□□□□□ -2.07
CSDE1-211ENST00000525970 SERPINB1P30740 379 aa2.1□□□□□ -2.07
CSDE1-211ENST00000525970 ATP5G3P48201 142 aa2.1□□□□□ -2.07
CSDE1-211ENST00000525970 GNG3P63215 75 aa2.1□□□□□ -2.07
CSDE1-211ENST00000525970 SUPT4H1P63272 117 aaKnown RBP2.1□□□□□ -2.07
CSDE1-211ENST00000525970 HES1Q14469 280 aa2.1□□□□□ -2.07
CSDE1-211ENST00000525970 ZNF181Q2M3W8 571 aa2.1□□□□□ -2.07
CSDE1-211ENST00000525970 ARPINQ7Z6K5 226 aa2.1□□□□□ -2.07
CSDE1-211ENST00000525970 CTAGE3PQ8IX95 158 aa2.1□□□□□ -2.07
CSDE1-211ENST00000525970 OR52R1Q8NGF1 315 aa2.1□□□□□ -2.07
CSDE1-211ENST00000525970 PFN4Q8NHR9 129 aa2.1□□□□□ -2.07
CSDE1-211ENST00000525970 SAR1AQ9NR31 198 aa2.1□□□□□ -2.07
CSDE1-211ENST00000525970 SMPXQ9UHP9 88 aa2.1□□□□□ -2.07
CSDE1-211ENST00000525970 PRNDQ9UKY0 176 aa2.1□□□□□ -2.07
CSDE1-211ENST00000525970 TIMM9Q9Y5J7 89 aa2.1□□□□□ -2.07
CSDE1-211ENST00000525970 MYH7BA7E2Y1 1941 aa2.1□□□□□ -2.07
CSDE1-211ENST00000525970 DENND4CQ5VZ89 1909 aa2.1□□□□□ -2.07
CSDE1-211ENST00000525970 DLG5Q8TDM6 1919 aa2.1□□□□□ -2.07
CSDE1-211ENST00000525970 XRN1Q8IZH2 1706 aaKnown RBP2.1□□□□□ -2.07
CSDE1-211ENST00000525970 NEXMIFQ5QGS0 1516 aa2.1□□□□□ -2.07
CSDE1-211ENST00000525970 STRCQ7RTU9 1775 aa2.1□□□□□ -2.07
CSDE1-211ENST00000525970 CEP170BQ9Y4F5 1589 aaPredicted RBP2.1□□□□□ -2.07
CSDE1-211ENST00000525970 CPDO75976 1380 aa2.1□□□□□ -2.07
CSDE1-211ENST00000525970 MPDZO75970 2070 aa2.1□□□□□ -2.07
CSDE1-211ENST00000525970 KIAA2026Q5HYC2 2103 aa2.09□□□□□ -2.07
CSDE1-211ENST00000525970 EDC4Q6P2E9 1401 aaKnown RBP2.09□□□□□ -2.07
CSDE1-211ENST00000525970 ANKARQ7Z5J8 1434 aa2.09□□□□□ -2.07
CSDE1-211ENST00000525970 MYH7P12883 1935 aa2.09□□□□□ -2.07
CSDE1-211ENST00000525970 ARHGEF28Q8N1W1 1705 aaKnown RBP2.09□□□□□ -2.07
CSDE1-211ENST00000525970 CRYBG1Q9Y4K1 1723 aa2.09□□□□□ -2.07
CSDE1-211ENST00000525970 PPLO60437 1756 aa2.09□□□□□ -2.07
CSDE1-211ENST00000525970 CASZ1Q86V15 1759 aa2.09□□□□□ -2.07
CSDE1-211ENST00000525970 ATP7AQ04656 1500 aa2.09□□□□□ -2.07
CSDE1-211ENST00000525970 A0A0G2JQZ4 141 aa2.09□□□□□ -2.07
CSDE1-211ENST00000525970 CLPSP04118 112 aa2.09□□□□□ -2.07
CSDE1-211ENST00000525970 IGKV4-1P06312 121 aa2.09□□□□□ -2.07
CSDE1-211ENST00000525970 CBR1P16152 277 aa2.09□□□□□ -2.07
CSDE1-211ENST00000525970 RPS4Y1P22090 263 aaKnown RBP2.09□□□□□ -2.07
CSDE1-211ENST00000525970 SRIP30626 198 aa2.09□□□□□ -2.07
CSDE1-211ENST00000525970 DEFA3P59666 94 aa2.09□□□□□ -2.07
CSDE1-211ENST00000525970 RPL26P61254 145 aaKnown RBP2.09□□□□□ -2.07
CSDE1-211ENST00000525970 RELAQ04206 551 aa2.09□□□□□ -2.07
CSDE1-211ENST00000525970 FAM27BQ5VT28 67 aa2.09□□□□□ -2.07
CSDE1-211ENST00000525970 LCA10Q71F78 164 aa2.09□□□□□ -2.07
CSDE1-211ENST00000525970 AKAP14Q86UN6 197 aa2.09□□□□□ -2.07
CSDE1-211ENST00000525970 CLVS1Q8IUQ0 354 aaPredicted RBP2.09□□□□□ -2.07
CSDE1-211ENST00000525970 SMIM20Q8N5G0 67 aa2.09□□□□□ -2.07
CSDE1-211ENST00000525970 MRPS24Q96EL2 167 aaKnown RBP2.09□□□□□ -2.07
CSDE1-211ENST00000525970 CGREF1Q99674 301 aa2.09□□□□□ -2.07
CSDE1-211ENST00000525970 TRABDQ9H4I3 376 aa2.09□□□□□ -2.07
CSDE1-211ENST00000525970 UFC1Q9Y3C8 167 aa2.09□□□□□ -2.07
CSDE1-211ENST00000525970 AP4S1Q9Y587 144 aa2.09□□□□□ -2.07
CSDE1-211ENST00000525970 ABCA8O94911 1581 aa2.09□□□□□ -2.08
CSDE1-211ENST00000525970 NRKQ7Z2Y5 1582 aa2.09□□□□□ -2.08
CSDE1-211ENST00000525970 MYH13Q9UKX3 1938 aa2.09□□□□□ -2.08
CSDE1-211ENST00000525970 CCDC88CQ9P219 2028 aa2.08□□□□□ -2.08
CSDE1-211ENST00000525970 MAP2P11137 1827 aaKnown RBP2.08□□□□□ -2.08
CSDE1-211ENST00000525970 LAMA4Q16363 1823 aa2.08□□□□□ -2.08
CSDE1-211ENST00000525970 ADGRB1O14514 1584 aa2.08□□□□□ -2.08
CSDE1-211ENST00000525970 DIP2AQ14689 1571 aa2.08□□□□□ -2.08
CSDE1-211ENST00000525970 TMSB15BA0A087X1C1 80 aa2.08□□□□□ -2.08
CSDE1-211ENST00000525970 TRBV10-2A0A0K0K1G8 114 aa2.08□□□□□ -2.08
CSDE1-211ENST00000525970 FUOMA2VDF0 154 aa2.08□□□□□ -2.08
CSDE1-211ENST00000525970 OR51F1A6NGY5 319 aa2.08□□□□□ -2.08
CSDE1-211ENST00000525970 LY6LH3BQJ8 138 aa2.08□□□□□ -2.08
CSDE1-211ENST00000525970 SLC22A1O15245 554 aa2.08□□□□□ -2.08
CSDE1-211ENST00000525970 HMGB3O15347 200 aaKnown RBP2.08□□□□□ -2.08
CSDE1-211ENST00000525970 EDF1O60869 148 aaKnown RBP2.08□□□□□ -2.08
CSDE1-211ENST00000525970 CIAO1O76071 339 aa2.08□□□□□ -2.08
CSDE1-211ENST00000525970 PPBPP02775 128 aa2.08□□□□□ -2.08
CSDE1-211ENST00000525970 IGKV1-16P04430 117 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms