RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 IGHV3-74A0A0B4J1X5 117 aa8.29□□□□□ -1.08
TRAPPC4-204ENST00000524797 CEBPZOSA8MTT3 80 aa8.29□□□□□ -1.08
TRAPPC4-204ENST00000524797 PRAF2O60831 178 aa8.29□□□□□ -1.08
TRAPPC4-204ENST00000524797 C2orf83Q53S99 150 aa8.29□□□□□ -1.08
TRAPPC4-204ENST00000524797 CLRN3Q8NCR9 226 aa8.29□□□□□ -1.08
TRAPPC4-204ENST00000524797 OR4X1Q8NH49 305 aa8.29□□□□□ -1.08
TRAPPC4-204ENST00000524797 SEC22CQ9BRL7 303 aa8.29□□□□□ -1.08
TRAPPC4-204ENST00000524797 VSIRQ9H7M9 311 aa8.29□□□□□ -1.08
TRAPPC4-204ENST00000524797 A0A1B0GU03 582 aa8.29□□□□□ -1.08
TRAPPC4-204ENST00000524797 L7N2F9 121 aa8.29□□□□□ -1.08
TRAPPC4-204ENST00000524797 NXPH3O95157 252 aa8.29□□□□□ -1.08
TRAPPC4-204ENST00000524797 APOHP02749 345 aaPredicted RBP8.29□□□□□ -1.08
TRAPPC4-204ENST00000524797 AP3S2P59780 193 aa8.29□□□□□ -1.08
TRAPPC4-204ENST00000524797 SLC24A4Q8NFF2 622 aa8.29□□□□□ -1.08
TRAPPC4-204ENST00000524797 ST8SIA2Q92186 375 aa8.29□□□□□ -1.08
TRAPPC4-204ENST00000524797 A0A0B4J2A0 478 aa8.28□□□□□ -1.08
TRAPPC4-204ENST00000524797 BMI1P35226 326 aa8.28□□□□□ -1.08
TRAPPC4-204ENST00000524797 TFPI2P48307 235 aa8.28□□□□□ -1.08
TRAPPC4-204ENST00000524797 CCR6P51684 374 aa8.28□□□□□ -1.08
TRAPPC4-204ENST00000524797 SMCO1Q147U7 214 aa8.28□□□□□ -1.08
TRAPPC4-204ENST00000524797 TIGITQ495A1 244 aa8.28□□□□□ -1.08
TRAPPC4-204ENST00000524797 NMSQ5H8A3 153 aa8.28□□□□□ -1.08
TRAPPC4-204ENST00000524797 TCF24Q7RTU0 167 aa8.28□□□□□ -1.08
TRAPPC4-204ENST00000524797 LYZL2Q7Z4W2 148 aa8.28□□□□□ -1.08
TRAPPC4-204ENST00000524797 LGI3Q8N145 548 aa8.28□□□□□ -1.08
TRAPPC4-204ENST00000524797 TMEM170AQ8WVE7 144 aa8.28□□□□□ -1.08
TRAPPC4-204ENST00000524797 C12orf57Q99622 126 aa8.28□□□□□ -1.08
TRAPPC4-204ENST00000524797 OVOL2Q9BRP0 275 aa8.28□□□□□ -1.08
TRAPPC4-204ENST00000524797 SAV1Q9H4B6 383 aaPredicted RBP8.28□□□□□ -1.08
TRAPPC4-204ENST00000524797 CACFD1Q9UGQ2 172 aa8.28□□□□□ -1.08
TRAPPC4-204ENST00000524797 SHPKQ9UHJ6 478 aa8.28□□□□□ -1.08
TRAPPC4-204ENST00000524797 SCGB2A1O75556 95 aa8.27□□□□□ -1.09
TRAPPC4-204ENST00000524797 NMBP08949 121 aa8.27□□□□□ -1.09
TRAPPC4-204ENST00000524797 APOC4P55056 127 aa8.27□□□□□ -1.09
TRAPPC4-204ENST00000524797 CMC4P56277 68 aaPredicted RBP8.27□□□□□ -1.09
TRAPPC4-204ENST00000524797 SRPXP78539 464 aa8.27□□□□□ -1.09
TRAPPC4-204ENST00000524797 EIF4E3Q8N5X7 224 aaKnown RBP8.27□□□□□ -1.09
TRAPPC4-204ENST00000524797 RNASEH2CQ8TDP1 164 aaKnown RBP8.27□□□□□ -1.09
TRAPPC4-204ENST00000524797 RBKSQ9H477 322 aa8.27□□□□□ -1.09
TRAPPC4-204ENST00000524797 IGKV3-7A0A075B6H7 116 aa8.27□□□□□ -1.09
TRAPPC4-204ENST00000524797 TRAV30A0A087WSZ9 112 aa8.27□□□□□ -1.09
TRAPPC4-204ENST00000524797 IGKV1-17P01599 117 aa8.27□□□□□ -1.09
TRAPPC4-204ENST00000524797 NPY1RP25929 384 aa8.27□□□□□ -1.09
TRAPPC4-204ENST00000524797 TNFRSF9Q07011 255 aa8.27□□□□□ -1.09
TRAPPC4-204ENST00000524797 PRSS54Q6PEW0 395 aa8.27□□□□□ -1.09
TRAPPC4-204ENST00000524797 TMED4Q7Z7H5 227 aa8.27□□□□□ -1.09
TRAPPC4-204ENST00000524797 GBGT1Q8N5D6 347 aa8.27□□□□□ -1.09
TRAPPC4-204ENST00000524797 OR1S2Q8NGQ3 325 aa8.27□□□□□ -1.09
TRAPPC4-204ENST00000524797 HSPB7Q9UBY9 170 aa8.27□□□□□ -1.09
TRAPPC4-204ENST00000524797 IGHV3-66A0A0C4DH42 116 aa8.26□□□□□ -1.09
TRAPPC4-204ENST00000524797 DUXBA0A1W2PPF3 345 aa8.26□□□□□ -1.09
TRAPPC4-204ENST00000524797 MPTX1A8MV57 137 aa8.26□□□□□ -1.09
TRAPPC4-204ENST00000524797 LINC00587B1AMM8 73 aa8.26□□□□□ -1.09
TRAPPC4-204ENST00000524797 G3V3Q6 166 aa8.26□□□□□ -1.09
TRAPPC4-204ENST00000524797 UBE2CO00762 179 aa8.26□□□□□ -1.09
TRAPPC4-204ENST00000524797 CD5P06127 495 aa8.26□□□□□ -1.09
TRAPPC4-204ENST00000524797 GIPP09681 153 aaPredicted RBP8.26□□□□□ -1.09
TRAPPC4-204ENST00000524797 SLC25A4P12235 298 aa8.26□□□□□ -1.09
TRAPPC4-204ENST00000524797 RPL35AP18077 110 aaKnown RBP8.26□□□□□ -1.09
TRAPPC4-204ENST00000524797 RND2P52198 227 aa8.26□□□□□ -1.09
TRAPPC4-204ENST00000524797 RAP2BP61225 183 aa8.26□□□□□ -1.09
TRAPPC4-204ENST00000524797 APRG1Q8IVJ8 170 aa8.26□□□□□ -1.09
TRAPPC4-204ENST00000524797 COQ8AQ8NI60 647 aa8.26□□□□□ -1.09
TRAPPC4-204ENST00000524797 C20orf85Q9H1P6 137 aa8.26□□□□□ -1.09
TRAPPC4-204ENST00000524797 TMEM231Q9H6L2 316 aa8.26□□□□□ -1.09
TRAPPC4-204ENST00000524797 MAP6D1Q9H9H5 199 aa8.26□□□□□ -1.09
TRAPPC4-204ENST00000524797 KIR2DL5BA0A0G2JN68 375 aa8.25□□□□□ -1.09
TRAPPC4-204ENST00000524797 KIR2DL5BA0A0G2JPC4 375 aa8.25□□□□□ -1.09
TRAPPC4-204ENST00000524797 NDUFS6O75380 124 aaKnown RBP8.25□□□□□ -1.09
TRAPPC4-204ENST00000524797 DFFBO76075 338 aa8.25□□□□□ -1.09
TRAPPC4-204ENST00000524797 IGLC1P0CG04 106 aa8.25□□□□□ -1.09
TRAPPC4-204ENST00000524797 NPPCP23582 126 aa8.25□□□□□ -1.09
TRAPPC4-204ENST00000524797 CRYBB3P26998 211 aa8.25□□□□□ -1.09
TRAPPC4-204ENST00000524797 PCP4P48539 62 aa8.25□□□□□ -1.09
TRAPPC4-204ENST00000524797 PAFAH1B2P68402 229 aa8.25□□□□□ -1.09
TRAPPC4-204ENST00000524797 TMEM128Q5BJH2 165 aa8.25□□□□□ -1.09
TRAPPC4-204ENST00000524797 Q6ZWC4 215 aa8.25□□□□□ -1.09
TRAPPC4-204ENST00000524797 KIR2DL5AQ8N109 375 aa8.25□□□□□ -1.09
TRAPPC4-204ENST00000524797 OR1S1Q8NH92 325 aa8.25□□□□□ -1.09
TRAPPC4-204ENST00000524797 KIR2DL5BQ8NHK3 375 aa8.25□□□□□ -1.09
TRAPPC4-204ENST00000524797 IL17DQ8TAD2 202 aa8.25□□□□□ -1.09
TRAPPC4-204ENST00000524797 METTL26Q96S19 204 aa8.25□□□□□ -1.09
TRAPPC4-204ENST00000524797 SLC25A21Q9BQT8 299 aaPredicted RBP8.25□□□□□ -1.09
TRAPPC4-204ENST00000524797 MS4A6AQ9H2W1 248 aa8.25□□□□□ -1.09
TRAPPC4-204ENST00000524797 TP53TG1Q9Y2A0 90 aa8.25□□□□□ -1.09
TRAPPC4-204ENST00000524797 RYR3Q15413 4870 aa8.25□□□□□ -1.09
TRAPPC4-204ENST00000524797 TRAV2A0A0B4J234 112 aa8.25□□□□□ -1.09
TRAPPC4-204ENST00000524797 PIGBOS1A0A0B4J2F0 54 aa8.25□□□□□ -1.09
TRAPPC4-204ENST00000524797 LCE6AA0A183 80 aa8.25□□□□□ -1.09
TRAPPC4-204ENST00000524797 RAB19A4D1S5 217 aa8.25□□□□□ -1.09
TRAPPC4-204ENST00000524797 NAP1L6A6NFF2 107 aa8.25□□□□□ -1.09
TRAPPC4-204ENST00000524797 DNASE2O00115 360 aaPredicted RBP8.25□□□□□ -1.09
TRAPPC4-204ENST00000524797 SPRY2O43597 315 aa8.25□□□□□ -1.09
TRAPPC4-204ENST00000524797 SFT2D2O95562 160 aa8.25□□□□□ -1.09
TRAPPC4-204ENST00000524797 IFNA10P01566 189 aa8.25□□□□□ -1.09
TRAPPC4-204ENST00000524797 APOC3P02656 99 aa8.25□□□□□ -1.09
TRAPPC4-204ENST00000524797 CXCL2P19875 107 aa8.25□□□□□ -1.09
TRAPPC4-204ENST00000524797 OR10J1P30954 320 aa8.25□□□□□ -1.09
TRAPPC4-204ENST00000524797 S100A11P31949 105 aa8.25□□□□□ -1.09
TRAPPC4-204ENST00000524797 YPEL3P61236 119 aaPredicted RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms