RNA–Protein interactions for RNA: ENST00000524563.1

NUP98-213, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-213ENST00000524563 RAB5AP20339 215 aa5.05□□□□□ -1.6
NUP98-213ENST00000524563 CHRNA7P36544 502 aa5.05□□□□□ -1.6
NUP98-213ENST00000524563 SPCS3P61009 180 aa5.05□□□□□ -1.6
NUP98-213ENST00000524563 GNB1P62873 340 aa5.05□□□□□ -1.6
NUP98-213ENST00000524563 RUNX1Q01196 453 aa5.05□□□□□ -1.6
NUP98-213ENST00000524563 TNXAQ16473 311 aa5.05□□□□□ -1.6
NUP98-213ENST00000524563 PRSS8Q16651 343 aa5.05□□□□□ -1.6
NUP98-213ENST00000524563 VMA21Q3ZAQ7 101 aa5.05□□□□□ -1.6
NUP98-213ENST00000524563 SPINK9Q5DT21 86 aa5.05□□□□□ -1.6
NUP98-213ENST00000524563 C10orf55Q5SWW7 151 aa5.05□□□□□ -1.6
NUP98-213ENST00000524563 CASC10Q5T4H9 136 aa5.05□□□□□ -1.6
NUP98-213ENST00000524563 ASPHD1Q5U4P2 390 aa5.05□□□□□ -1.6
NUP98-213ENST00000524563 OR4A47Q6IF82 309 aa5.05□□□□□ -1.6
NUP98-213ENST00000524563 TMEM14EPQ6UXP3 125 aa5.05□□□□□ -1.6
NUP98-213ENST00000524563 ZNF562Q6V9R5 426 aa5.05□□□□□ -1.6
NUP98-213ENST00000524563 ZNF429Q86V71 674 aa5.05□□□□□ -1.6
NUP98-213ENST00000524563 TEX45Q8NA69 505 aa5.05□□□□□ -1.6
NUP98-213ENST00000524563 MYOZ3Q8TDC0 251 aa5.05□□□□□ -1.6
NUP98-213ENST00000524563 OR4C12Q96R67 309 aa5.05□□□□□ -1.6
NUP98-213ENST00000524563 C12orf57Q99622 126 aa5.05□□□□□ -1.6
NUP98-213ENST00000524563 PSMG3Q9BT73 122 aaPredicted RBP5.05□□□□□ -1.6
NUP98-213ENST00000524563 TMEM147Q9BVK8 224 aa5.05□□□□□ -1.6
NUP98-213ENST00000524563 QTRT1Q9BXR0 403 aaKnown RBP5.05□□□□□ -1.6
NUP98-213ENST00000524563 EIF5A2Q9GZV4 153 aaKnown RBP5.05□□□□□ -1.6
NUP98-213ENST00000524563 KLK15Q9H2R5 256 aa5.05□□□□□ -1.6
NUP98-213ENST00000524563 ZNF430Q9H8G1 570 aaPredicted RBP5.05□□□□□ -1.6
NUP98-213ENST00000524563 LSM4Q9Y4Z0 139 aaKnown RBP5.05□□□□□ -1.6
NUP98-213ENST00000524563 A0A1B0GV50 99 aa5.04□□□□□ -1.6
NUP98-213ENST00000524563 SMCO3A2RU48 225 aa5.04□□□□□ -1.6
NUP98-213ENST00000524563 CXorf65A6NEN9 183 aa5.04□□□□□ -1.6
NUP98-213ENST00000524563 RBFOX3A6NFN3 312 aa5.04□□□□□ -1.6
NUP98-213ENST00000524563 C15orf61A6NNL5 157 aa5.04□□□□□ -1.6
NUP98-213ENST00000524563 LINC01619G3V211 115 aa5.04□□□□□ -1.6
NUP98-213ENST00000524563 EIF3GO75821 320 aaKnown RBP eCLIP5.04□□□□□ -1.6
NUP98-213ENST00000524563 CNIH1O95406 144 aa5.04□□□□□ -1.6
NUP98-213ENST00000524563 APELAP0DMC3 54 aa5.04□□□□□ -1.6
NUP98-213ENST00000524563 GP9P14770 177 aa5.04□□□□□ -1.6
NUP98-213ENST00000524563 MYOD1P15172 320 aa5.04□□□□□ -1.6
NUP98-213ENST00000524563 RPL35P42766 123 aaKnown RBP5.04□□□□□ -1.6
NUP98-213ENST00000524563 SLURP1P55000 103 aa5.04□□□□□ -1.6
NUP98-213ENST00000524563 RAB11AP62491 216 aa5.04□□□□□ -1.6
NUP98-213ENST00000524563 FHL3Q13643 280 aa5.04□□□□□ -1.6
NUP98-213ENST00000524563 KIAA0141Q14154 515 aaPredicted RBP5.04□□□□□ -1.6
NUP98-213ENST00000524563 ICAM4Q14773 271 aa5.04□□□□□ -1.6
NUP98-213ENST00000524563 FXYD3Q14802 87 aa5.04□□□□□ -1.6
NUP98-213ENST00000524563 POU2AF1Q16633 256 aa5.04□□□□□ -1.6
NUP98-213ENST00000524563 AKIRIN2Q53H80 203 aa5.04□□□□□ -1.6
NUP98-213ENST00000524563 KHDC3LQ587J8 217 aa5.04□□□□□ -1.6
NUP98-213ENST00000524563 UNQ5815/PRO19632Q6UWF5 114 aa5.04□□□□□ -1.6
NUP98-213ENST00000524563 MMD2Q8IY49 270 aa5.04□□□□□ -1.6
NUP98-213ENST00000524563 ZNF709Q8N972 641 aa5.04□□□□□ -1.6
NUP98-213ENST00000524563 OR52E5Q8NH55 327 aa5.04□□□□□ -1.6
NUP98-213ENST00000524563 TMEM167AQ8TBQ9 72 aa5.04□□□□□ -1.6
NUP98-213ENST00000524563 MBD3L1Q8WWY6 194 aa5.04□□□□□ -1.6
NUP98-213ENST00000524563 SRSF12Q8WXF0 261 aaKnown RBP5.04□□□□□ -1.6
NUP98-213ENST00000524563 RHOVQ96L33 236 aa5.04□□□□□ -1.6
NUP98-213ENST00000524563 TCEAL7Q9BRU2 100 aa5.04□□□□□ -1.6
NUP98-213ENST00000524563 ELOVL1Q9BW60 279 aa5.04□□□□□ -1.6
NUP98-213ENST00000524563 WDR61Q9GZS3 305 aaKnown RBP5.04□□□□□ -1.6
NUP98-213ENST00000524563 RPS10P5Q9NQ39 176 aa5.04□□□□□ -1.6
NUP98-213ENST00000524563 HEYLQ9NQ87 328 aaPredicted RBP5.04□□□□□ -1.6
NUP98-213ENST00000524563 ZNF355PQ9NSJ1 428 aa5.04□□□□□ -1.6
NUP98-213ENST00000524563 PRNDQ9UKY0 176 aa5.04□□□□□ -1.6
NUP98-213ENST00000524563 FOXA2Q9Y261 457 aaPredicted RBP5.04□□□□□ -1.6
NUP98-213ENST00000524563 TRAV3A0A0B4J244 114 aa5.03□□□□□ -1.6
NUP98-213ENST00000524563 LCE6AA0A183 80 aa5.03□□□□□ -1.6
NUP98-213ENST00000524563 LOC102723971A0A1B0GUV8 181 aa5.03□□□□□ -1.6
NUP98-213ENST00000524563 B4DEV8 164 aa5.03□□□□□ -1.6
NUP98-213ENST00000524563 E7EUB6 86 aa5.03□□□□□ -1.6
NUP98-213ENST00000524563 IGHV3-11P01762 117 aa5.03□□□□□ -1.6
NUP98-213ENST00000524563 IL6RP08887 468 aaPredicted RBP5.03□□□□□ -1.6
NUP98-213ENST00000524563 LGALS1P09382 135 aaKnown RBP5.03□□□□□ -1.6
NUP98-213ENST00000524563 FGF7P21781 194 aa5.03□□□□□ -1.6
NUP98-213ENST00000524563 RAB9AP51151 201 aa5.03□□□□□ -1.6
NUP98-213ENST00000524563 ELLP55199 621 aaPredicted RBP5.03□□□□□ -1.6
NUP98-213ENST00000524563 TPPP2P59282 170 aa5.03□□□□□ -1.6
NUP98-213ENST00000524563 CCL20P78556 96 aa5.03□□□□□ -1.6
NUP98-213ENST00000524563 SERF2P84101 59 aa5.03□□□□□ -1.6
NUP98-213ENST00000524563 ARL16Q0P5N6 197 aa5.03□□□□□ -1.6
NUP98-213ENST00000524563 SOHLH1Q5JUK2 328 aa5.03□□□□□ -1.6
NUP98-213ENST00000524563 C19orf35Q6ZS72 473 aa5.03□□□□□ -1.6
NUP98-213ENST00000524563 HAPLN4Q86UW8 402 aa5.03□□□□□ -1.6
NUP98-213ENST00000524563 SBSPONQ8IVN8 264 aa5.03□□□□□ -1.6
NUP98-213ENST00000524563 ZNF491Q8N8L2 437 aa5.03□□□□□ -1.6
NUP98-213ENST00000524563 VSTM2AQ8TAG5 236 aa5.03□□□□□ -1.6
NUP98-213ENST00000524563 UBE2E2Q96LR5 201 aa5.03□□□□□ -1.6
NUP98-213ENST00000524563 MS4A10Q96PG2 267 aa5.03□□□□□ -1.6
NUP98-213ENST00000524563 RSG1Q9BU20 258 aa5.03□□□□□ -1.6
NUP98-213ENST00000524563 HINT2Q9BX68 163 aa5.03□□□□□ -1.6
NUP98-213ENST00000524563 PLEKHA3Q9HB20 300 aa5.03□□□□□ -1.6
NUP98-213ENST00000524563 TMEM242Q9NWH2 141 aa5.03□□□□□ -1.6
NUP98-213ENST00000524563 GAR1Q9NY12 217 aaKnown RBP5.03□□□□□ -1.6
NUP98-213ENST00000524563 FKBP11Q9NYL4 201 aa5.03□□□□□ -1.6
NUP98-213ENST00000524563 BET1LQ9NYM9 111 aa5.03□□□□□ -1.6
NUP98-213ENST00000524563 TIMM9Q9Y5J7 89 aa5.03□□□□□ -1.6
NUP98-213ENST00000524563 OR51B2Q9Y5P1 312 aa5.03□□□□□ -1.6
NUP98-213ENST00000524563 RYR3Q15413 4870 aa5.02□□□□□ -1.61
NUP98-213ENST00000524563 IGHV4OR15-8A0A075B7B6 117 aa5.02□□□□□ -1.61
NUP98-213ENST00000524563 A0A087WW49 117 aa5.02□□□□□ -1.61
NUP98-213ENST00000524563 CGB1A6NKQ9 187 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms