RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 NEU1Q99519 415 aa8.88□□□□□ -0.99
HDAC9-228ENST00000524023 ZNF835Q9Y2P0 537 aa8.88□□□□□ -0.99
HDAC9-228ENST00000524023 TACC2O95359 2948 aa8.87□□□□□ -0.99
HDAC9-228ENST00000524023 IGHV1-69-2A0A0G2JMI3 117 aa8.87□□□□□ -0.99
HDAC9-228ENST00000524023 DIRC3C9JPN6 131 aa8.87□□□□□ -0.99
HDAC9-228ENST00000524023 APC2O95996 2303 aa8.87□□□□□ -0.99
HDAC9-228ENST00000524023 SLC25A5P05141 298 aaKnown RBP8.87□□□□□ -0.99
HDAC9-228ENST00000524023 CRYGBP07316 175 aa8.87□□□□□ -0.99
HDAC9-228ENST00000524023 UBE2G1P62253 170 aa8.87□□□□□ -0.99
HDAC9-228ENST00000524023 TCF15Q12870 199 aa8.87□□□□□ -0.99
HDAC9-228ENST00000524023 TNXAQ16473 311 aa8.87□□□□□ -0.99
HDAC9-228ENST00000524023 PRR27Q6MZM9 219 aa8.87□□□□□ -0.99
HDAC9-228ENST00000524023 LHFPL4Q7Z7J7 247 aa8.87□□□□□ -0.99
HDAC9-228ENST00000524023 TMEM116Q8NCL8 245 aa8.87□□□□□ -0.99
HDAC9-228ENST00000524023 PRSS33Q8NF86 280 aa8.87□□□□□ -0.99
HDAC9-228ENST00000524023 TSKUQ8WUA8 353 aa8.87□□□□□ -0.99
HDAC9-228ENST00000524023 CHRDL1Q9BU40 450 aa8.87□□□□□ -0.99
HDAC9-228ENST00000524023 NGBQ9NPG2 151 aa8.87□□□□□ -0.99
HDAC9-228ENST00000524023 ZZEF1O43149 2961 aa8.87□□□□□ -0.99
HDAC9-228ENST00000524023 PGPA6NDG6 321 aa8.86□□□□□ -0.99
HDAC9-228ENST00000524023 IGLV1-47P01700 117 aa8.86□□□□□ -0.99
HDAC9-228ENST00000524023 APELAP0DMC3 54 aa8.86□□□□□ -0.99
HDAC9-228ENST00000524023 HIST1H1EP10412 219 aaKnown RBP8.86□□□□□ -0.99
HDAC9-228ENST00000524023 DLX1P56177 255 aa8.86□□□□□ -0.99
HDAC9-228ENST00000524023 GDF5OSQ5U4N7 250 aa8.86□□□□□ -0.99
HDAC9-228ENST00000524023 MRPL52Q86TS9 123 aaKnown RBP8.86□□□□□ -0.99
HDAC9-228ENST00000524023 NIT1Q86X76 327 aa8.86□□□□□ -0.99
HDAC9-228ENST00000524023 C18orf32Q8TCD1 76 aa8.86□□□□□ -0.99
HDAC9-228ENST00000524023 C22orf15Q8WYQ4 148 aa8.86□□□□□ -0.99
HDAC9-228ENST00000524023 TNFRSF14Q92956 283 aa8.86□□□□□ -0.99
HDAC9-228ENST00000524023 KLF12Q9Y4X4 402 aa8.86□□□□□ -0.99
HDAC9-228ENST00000524023 IGHV3-21A0A0B4J1V1 117 aa8.86□□□□□ -0.99
HDAC9-228ENST00000524023 IGHV2-26A0A0B4J1V2 119 aa8.86□□□□□ -0.99
HDAC9-228ENST00000524023 CORTO00230 105 aa8.86□□□□□ -0.99
HDAC9-228ENST00000524023 HYPMO75409 117 aa8.86□□□□□ -0.99
HDAC9-228ENST00000524023 NBEAP1P0C6P0 100 aa8.86□□□□□ -0.99
HDAC9-228ENST00000524023 SPACA3Q8IXA5 215 aa8.86□□□□□ -0.99
HDAC9-228ENST00000524023 OR4B1Q8NGF8 309 aa8.86□□□□□ -0.99
HDAC9-228ENST00000524023 SMIM12Q96EX1 92 aa8.86□□□□□ -0.99
HDAC9-228ENST00000524023 SGK494Q96LW2 274 aa8.86□□□□□ -0.99
HDAC9-228ENST00000524023 MRPL27Q9P0M9 148 aaKnown RBP8.86□□□□□ -0.99
HDAC9-228ENST00000524023 SIGLEC9Q9Y336 463 aa8.86□□□□□ -0.99
HDAC9-228ENST00000524023 HIGD1CA8MV81 97 aa8.85□□□□□ -0.99
HDAC9-228ENST00000524023 M0QZK8 103 aa8.85□□□□□ -0.99
HDAC9-228ENST00000524023 GP9P14770 177 aa8.85□□□□□ -0.99
HDAC9-228ENST00000524023 APOBEC3AP31941 199 aaPredicted RBP8.85□□□□□ -0.99
HDAC9-228ENST00000524023 PRRX1P54821 245 aa8.85□□□□□ -0.99
HDAC9-228ENST00000524023 CASP6P55212 293 aa8.85□□□□□ -0.99
HDAC9-228ENST00000524023 PAX2Q02962 417 aa8.85□□□□□ -0.99
HDAC9-228ENST00000524023 FAM19A2Q8N3H0 131 aa8.85□□□□□ -0.99
HDAC9-228ENST00000524023 GPR82Q96P67 336 aa8.85□□□□□ -0.99
HDAC9-228ENST00000524023 MLST8Q9BVC4 326 aa8.85□□□□□ -0.99
HDAC9-228ENST00000524023 RALYQ9UKM9 306 aaKnown RBP8.85□□□□□ -0.99
HDAC9-228ENST00000524023 IGHV1-3A0A0C4DH29 117 aa8.85□□□□□ -0.99
HDAC9-228ENST00000524023 VWC2LB2RUY7 222 aa8.85□□□□□ -0.99
HDAC9-228ENST00000524023 C3orf79P0CE67 100 aa8.85□□□□□ -0.99
HDAC9-228ENST00000524023 PLP1P60201 277 aa8.85□□□□□ -0.99
HDAC9-228ENST00000524023 PRB3Q04118 309 aaPredicted RBP8.85□□□□□ -0.99
HDAC9-228ENST00000524023 RPH3ALQ9UNE2 315 aa8.85□□□□□ -0.99
HDAC9-228ENST00000524023 INSIG2Q9Y5U4 225 aa8.85□□□□□ -0.99
HDAC9-228ENST00000524023 F11RQ9Y624 299 aaKnown RBP8.85□□□□□ -0.99
HDAC9-228ENST00000524023 ABCA1O95477 2261 aa8.84□□□□□ -0.99
HDAC9-228ENST00000524023 B9A039 149 aa8.84□□□□□ -0.99
HDAC9-228ENST00000524023 TEX22C9J3V5 150 aa8.84□□□□□ -0.99
HDAC9-228ENST00000524023 BUB1B-PAK6H3BSN5 160 aa8.84□□□□□ -0.99
HDAC9-228ENST00000524023 FAM87AP0C7U9 286 aa8.84□□□□□ -0.99
HDAC9-228ENST00000524023 CTRLP40313 264 aa8.84□□□□□ -0.99
HDAC9-228ENST00000524023 CA7P43166 264 aa8.84□□□□□ -0.99
HDAC9-228ENST00000524023 PRR30Q53SZ7 412 aaPredicted RBP8.84□□□□□ -0.99
HDAC9-228ENST00000524023 ATP5L2Q7Z4Y8 100 aa8.84□□□□□ -0.99
HDAC9-228ENST00000524023 PPP1R27Q86WC6 154 aa8.84□□□□□ -0.99
HDAC9-228ENST00000524023 C5orf17Q8NAS9 161 aa8.84□□□□□ -0.99
HDAC9-228ENST00000524023 C8orf46Q8TAG6 207 aa8.84□□□□□ -0.99
HDAC9-228ENST00000524023 A0A1B0GXF2 115 aa8.83□□□□□ -1
HDAC9-228ENST00000524023 LYNX1G3V0Z9 82 aa8.83□□□□□ -1
HDAC9-228ENST00000524023 OR2J3O76001 311 aa8.83□□□□□ -1
HDAC9-228ENST00000524023 TOMM40O96008 361 aa8.83□□□□□ -1
HDAC9-228ENST00000524023 LYNX1P0DP58 116 aa8.83□□□□□ -1
HDAC9-228ENST00000524023 NTF3P20783 257 aa8.83□□□□□ -1
HDAC9-228ENST00000524023 KLF5Q13887 457 aaPredicted RBP8.83□□□□□ -1
HDAC9-228ENST00000524023 LEMD1Q68G75 181 aa8.83□□□□□ -1
HDAC9-228ENST00000524023 LINC00322Q6ZN03 302 aaPredicted RBP8.83□□□□□ -1
HDAC9-228ENST00000524023 ALKBH7Q9BT30 221 aaPredicted RBP8.83□□□□□ -1
HDAC9-228ENST00000524023 SSBP4Q9BWG4 385 aaPredicted RBP8.83□□□□□ -1
HDAC9-228ENST00000524023 CLEC7AQ9BXN2 247 aa8.83□□□□□ -1
HDAC9-228ENST00000524023 GSX1Q9H4S2 264 aaPredicted RBP8.83□□□□□ -1
HDAC9-228ENST00000524023 LRBAP50851 2863 aa8.83□□□□□ -1
HDAC9-228ENST00000524023 SPTBN2O15020 2390 aa8.83□□□□□ -1
HDAC9-228ENST00000524023 H3BTX0 84 aa8.83□□□□□ -1
HDAC9-228ENST00000524023 LTAP01374 205 aa8.83□□□□□ -1
HDAC9-228ENST00000524023 GPR6P46095 362 aaPredicted RBP8.83□□□□□ -1
HDAC9-228ENST00000524023 CAMPP49913 170 aa8.83□□□□□ -1
HDAC9-228ENST00000524023 BORCS7Q96B45 105 aa8.83□□□□□ -1
HDAC9-228ENST00000524023 FMC1Q96HJ9 113 aa8.83□□□□□ -1
HDAC9-228ENST00000524023 PRSS22Q9GZN4 317 aa8.83□□□□□ -1
HDAC9-228ENST00000524023 Q9H3A6 140 aa8.83□□□□□ -1
HDAC9-228ENST00000524023 RPP21Q9H633 154 aaKnown RBP8.83□□□□□ -1
HDAC9-228ENST00000524023 DCHS2Q6V1P9 2916 aa8.82□□□□□ -1
HDAC9-228ENST00000524023 TCRAP04437 139 aa8.82□□□□□ -1
HDAC9-228ENST00000524023 CD3EP07766 207 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms