RNA–Protein interactions for RNA: ENST00000522998.1

PCM1-217, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-217ENST00000522998 AESQ08117 197 aa0.32□□□□□ -2.36
PCM1-217ENST00000522998 ESRGQ1W209 222 aa0.32□□□□□ -2.36
PCM1-217ENST00000522998 MPV17LQ2QL34 196 aa0.32□□□□□ -2.36
PCM1-217ENST00000522998 BRMS1LQ5PSV4 323 aa0.32□□□□□ -2.36
PCM1-217ENST00000522998 Q6Q795 121 aa0.32□□□□□ -2.36
PCM1-217ENST00000522998 OR8D4Q8NGM9 314 aa0.32□□□□□ -2.36
PCM1-217ENST00000522998 TMEM70Q9BUB7 260 aa0.32□□□□□ -2.36
PCM1-217ENST00000522998 V9GYY5 206 aaPredicted RBP0.32□□□□□ -2.36
PCM1-217ENST00000522998 DOCK4Q8N1I0 1966 aa0.32□□□□□ -2.36
PCM1-217ENST00000522998 KNTC1P50748 2209 aa0.32□□□□□ -2.36
PCM1-217ENST00000522998 PIK3C2GO75747 1445 aa0.31□□□□□ -2.36
PCM1-217ENST00000522998 APCP25054 2843 aa0.31□□□□□ -2.36
PCM1-217ENST00000522998 COL1A1P02452 1464 aaPredicted RBP0.31□□□□□ -2.36
PCM1-217ENST00000522998 MUC4Q99102 2169 aa0.31□□□□□ -2.36
PCM1-217ENST00000522998 TRAV3A0A0B4J244 114 aa0.31□□□□□ -2.36
PCM1-217ENST00000522998 J3QRK9 145 aa0.31□□□□□ -2.36
PCM1-217ENST00000522998 LYPLA2O95372 231 aa0.31□□□□□ -2.36
PCM1-217ENST00000522998 C8GP07360 202 aa0.31□□□□□ -2.36
PCM1-217ENST00000522998 ZNF25P17030 456 aaPredicted RBP0.31□□□□□ -2.36
PCM1-217ENST00000522998 RNASE4P34096 147 aaKnown RBP0.31□□□□□ -2.36
PCM1-217ENST00000522998 TMEM97Q5BJF2 176 aa0.31□□□□□ -2.36
PCM1-217ENST00000522998 TEX261Q6UWH6 196 aa0.31□□□□□ -2.36
PCM1-217ENST00000522998 OR52L1Q8NGH7 329 aa0.31□□□□□ -2.36
PCM1-217ENST00000522998 PATE1Q8WXA2 126 aa0.31□□□□□ -2.36
PCM1-217ENST00000522998 HIST1H2BLQ99880 126 aa0.31□□□□□ -2.36
PCM1-217ENST00000522998 TRIM4Q9C037 500 aa0.31□□□□□ -2.36
PCM1-217ENST00000522998 RNASE7Q9H1E1 156 aaKnown RBP0.31□□□□□ -2.36
PCM1-217ENST00000522998 OR51V1Q9H2C8 321 aa0.31□□□□□ -2.36
PCM1-217ENST00000522998 C14orf132Q9NPU4 83 aa0.31□□□□□ -2.36
PCM1-217ENST00000522998 CDC42SE1Q9NRR8 79 aa0.31□□□□□ -2.36
PCM1-217ENST00000522998 UQCC1Q9NVA1 299 aa0.31□□□□□ -2.36
PCM1-217ENST00000522998 C14orf105Q9NVL8 296 aa0.31□□□□□ -2.36
PCM1-217ENST00000522998 TVP23BQ9NYZ1 205 aa0.31□□□□□ -2.36
PCM1-217ENST00000522998 UBAP1Q9NZ09 502 aa0.31□□□□□ -2.36
PCM1-217ENST00000522998 IDI2-AS1Q9NZ38 188 aa0.31□□□□□ -2.36
PCM1-217ENST00000522998 PRELID3BQ9Y3B1 194 aa0.31□□□□□ -2.36
PCM1-217ENST00000522998 CHCHD2Q9Y6H1 151 aaPredicted RBP0.31□□□□□ -2.36
PCM1-217ENST00000522998 U3KQ87 197 aa0.31□□□□□ -2.36
PCM1-217ENST00000522998 RTL1A6NKG5 1358 aa0.31□□□□□ -2.36
PCM1-217ENST00000522998 PTPRFP10586 1907 aa0.3□□□□□ -2.36
PCM1-217ENST00000522998 ZFYVE9O95405 1425 aa0.3□□□□□ -2.36
PCM1-217ENST00000522998 CCL25O15444 150 aa0.3□□□□□ -2.36
PCM1-217ENST00000522998 CCL16O15467 120 aa0.3□□□□□ -2.36
PCM1-217ENST00000522998 PDE6DO43924 150 aa0.3□□□□□ -2.36
PCM1-217ENST00000522998 DHFRP00374 187 aa0.3□□□□□ -2.36
PCM1-217ENST00000522998 RPS17P08708 135 aaKnown RBP0.3□□□□□ -2.36
PCM1-217ENST00000522998 ANP32AP39687 249 aaKnown RBP0.3□□□□□ -2.36
PCM1-217ENST00000522998 CCL7P80098 99 aa0.3□□□□□ -2.36
PCM1-217ENST00000522998 SRSF6Q13247 344 aaKnown RBP0.3□□□□□ -2.36
PCM1-217ENST00000522998 SBSPONQ8IVN8 264 aa0.3□□□□□ -2.36
PCM1-217ENST00000522998 LINC00301Q8NCQ3 95 aa0.3□□□□□ -2.36
PCM1-217ENST00000522998 OR51A2Q8NGJ7 313 aa0.3□□□□□ -2.36
PCM1-217ENST00000522998 SLC25A40Q8TBP6 338 aa0.3□□□□□ -2.36
PCM1-217ENST00000522998 PRAP1Q96NZ9 151 aa0.3□□□□□ -2.36
PCM1-217ENST00000522998 PARVBQ9HBI1 364 aa0.3□□□□□ -2.36
PCM1-217ENST00000522998 BCL2L10Q9HD36 194 aa0.3□□□□□ -2.36
PCM1-217ENST00000522998 ASH1LQ9NR48 2969 aaKnown RBP0.3□□□□□ -2.36
PCM1-217ENST00000522998 GLTPQ9NZD2 209 aa0.3□□□□□ -2.36
PCM1-217ENST00000522998 UTP11Q9Y3A2 253 aaKnown RBP0.3□□□□□ -2.36
PCM1-217ENST00000522998 MYO3BQ8WXR4 1341 aa0.3□□□□□ -2.36
PCM1-217ENST00000522998 RIMBP3CA6NJZ7 1639 aa0.3□□□□□ -2.36
PCM1-217ENST00000522998 RIMBP3BA6NNM3 1639 aa0.3□□□□□ -2.36
PCM1-217ENST00000522998 RIMBP3Q9UFD9 1639 aa0.3□□□□□ -2.36
PCM1-217ENST00000522998 E9PCH4 1651 aa0.3□□□□□ -2.36
PCM1-217ENST00000522998 FANCMQ8IYD8 2048 aa0.3□□□□□ -2.36
PCM1-217ENST00000522998 CCDC160A6NGH7 325 aa0.29□□□□□ -2.36
PCM1-217ENST00000522998 SMIM17P0DL12 118 aa0.29□□□□□ -2.36
PCM1-217ENST00000522998 SRIP30626 198 aa0.29□□□□□ -2.36
PCM1-217ENST00000522998 Q8IYB0 196 aa0.29□□□□□ -2.36
PCM1-217ENST00000522998 CLECL1Q8IZS7 167 aa0.29□□□□□ -2.36
PCM1-217ENST00000522998 OR2T10Q8NGZ9 312 aa0.29□□□□□ -2.36
PCM1-217ENST00000522998 BORCS5Q969J3 196 aa0.29□□□□□ -2.36
PCM1-217ENST00000522998 SLAMF6Q96DU3 332 aa0.29□□□□□ -2.36
PCM1-217ENST00000522998 FBXO5Q9UKT4 447 aa0.29□□□□□ -2.36
PCM1-217ENST00000522998 SLC22A13Q9Y226 551 aa0.29□□□□□ -2.36
PCM1-217ENST00000522998 NAV3Q8IVL0 2385 aa0.29□□□□□ -2.36
PCM1-217ENST00000522998 CCDC144AA2RUR9 1427 aa0.29□□□□□ -2.36
PCM1-217ENST00000522998 TRBV6-4A0A1B0GX49 114 aa0.28□□□□□ -2.36
PCM1-217ENST00000522998 CYB5BO43169 146 aa0.28□□□□□ -2.36
PCM1-217ENST00000522998 CDKN2CP42773 168 aa0.28□□□□□ -2.36
PCM1-217ENST00000522998 DYNLT1P63172 113 aa0.28□□□□□ -2.36
PCM1-217ENST00000522998 PSG9Q00887 426 aa0.28□□□□□ -2.36
PCM1-217ENST00000522998 ITGB3BPQ13352 177 aaPredicted RBP0.28□□□□□ -2.36
PCM1-217ENST00000522998 OR11H6Q8NGC7 330 aa0.28□□□□□ -2.36
PCM1-217ENST00000522998 FAM172AQ8WUF8 416 aa0.28□□□□□ -2.36
PCM1-217ENST00000522998 GPER1Q99527 375 aa0.28□□□□□ -2.36
PCM1-217ENST00000522998 PRADC1Q9BSG0 188 aa0.28□□□□□ -2.36
PCM1-217ENST00000522998 C6orf62Q9GZU0 229 aaPredicted RBP0.28□□□□□ -2.36
PCM1-217ENST00000522998 TMEM126AQ9H061 195 aa0.28□□□□□ -2.36
PCM1-217ENST00000522998 TLNRD1Q9H1K6 362 aa0.28□□□□□ -2.36
PCM1-217ENST00000522998 UCK1Q9HA47 277 aa0.28□□□□□ -2.36
PCM1-217ENST00000522998 SIP14410 1827 aa0.28□□□□□ -2.36
PCM1-217ENST00000522998 NAV2Q8IVL1 2488 aa0.28□□□□□ -2.36
PCM1-217ENST00000522998 FMN1Q68DA7 1419 aa0.28□□□□□ -2.37
PCM1-217ENST00000522998 UBR2Q8IWV8 1755 aa0.27□□□□□ -2.37
PCM1-217ENST00000522998 TRAV4A0A0B4J268 109 aa0.27□□□□□ -2.37
PCM1-217ENST00000522998 IGHV1-58A0A0C4DH39 117 aa0.27□□□□□ -2.37
PCM1-217ENST00000522998 A0A1W2PPM0 123 aa0.27□□□□□ -2.37
PCM1-217ENST00000522998 TCRBV4S1A1TA0A5B7 111 aa0.27□□□□□ -2.37
PCM1-217ENST00000522998 C1orf196B1AJZ1 125 aa0.27□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms