RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 RD3LP0DJH9 198 aa12.04□□□□□ -0.48
CTNNA1-236ENST00000522792 PPIFP30405 207 aaKnown RBP12.04□□□□□ -0.48
CTNNA1-236ENST00000522792 ZNF506Q5JVG8 444 aa12.04□□□□□ -0.48
CTNNA1-236ENST00000522792 VN1R17PQ8TDU5 208 aa12.04□□□□□ -0.48
CTNNA1-236ENST00000522792 PFDN5Q99471 154 aa12.04□□□□□ -0.48
CTNNA1-236ENST00000522792 F8W036 122 aa12.03□□□□□ -0.48
CTNNA1-236ENST00000522792 IFNA1P01562 189 aa12.03□□□□□ -0.48
CTNNA1-236ENST00000522792 HNF1AP20823 631 aa12.03□□□□□ -0.48
CTNNA1-236ENST00000522792 GPR183P32249 361 aa12.03□□□□□ -0.48
CTNNA1-236ENST00000522792 ZNF502Q8TBZ5 544 aa12.03□□□□□ -0.48
CTNNA1-236ENST00000522792 C19orf24Q9BVV8 132 aa12.03□□□□□ -0.48
CTNNA1-236ENST00000522792 MYO9AB2RTY4 2548 aa12.03□□□□□ -0.48
CTNNA1-236ENST00000522792 TRAV30A0A087WSZ9 112 aa12.03□□□□□ -0.48
CTNNA1-236ENST00000522792 CEBPGP53567 150 aa12.03□□□□□ -0.48
CTNNA1-236ENST00000522792 TPPP2P59282 170 aa12.03□□□□□ -0.48
CTNNA1-236ENST00000522792 UBE2G2P60604 165 aa12.03□□□□□ -0.48
CTNNA1-236ENST00000522792 RBMS3Q6XE24 437 aaKnown RBP12.03□□□□□ -0.48
CTNNA1-236ENST00000522792 LINC00305Q7Z4B0 112 aa12.03□□□□□ -0.48
CTNNA1-236ENST00000522792 TECRQ9NZ01 308 aaKnown RBP12.03□□□□□ -0.48
CTNNA1-236ENST00000522792 ACANP16112 2415 aa12.02□□□□□ -0.49
CTNNA1-236ENST00000522792 HYPMO75409 117 aa12.02□□□□□ -0.49
CTNNA1-236ENST00000522792 SCO1O75880 301 aa12.02□□□□□ -0.49
CTNNA1-236ENST00000522792 TOMM40O96008 361 aa12.02□□□□□ -0.49
CTNNA1-236ENST00000522792 APOC3P02656 99 aa12.02□□□□□ -0.49
CTNNA1-236ENST00000522792 FABP1P07148 127 aa12.02□□□□□ -0.49
CTNNA1-236ENST00000522792 PF4V1P10720 104 aa12.02□□□□□ -0.49
CTNNA1-236ENST00000522792 GCHFRP30047 84 aa12.02□□□□□ -0.49
CTNNA1-236ENST00000522792 ATP5G2Q06055 141 aa12.02□□□□□ -0.49
CTNNA1-236ENST00000522792 KHDC3LQ587J8 217 aa12.02□□□□□ -0.49
CTNNA1-236ENST00000522792 CLEC19AQ6UXS0 136 aa12.02□□□□□ -0.49
CTNNA1-236ENST00000522792 LCNL1Q6ZST4 164 aa12.02□□□□□ -0.49
CTNNA1-236ENST00000522792 EEF1AKMT3Q96AZ1 226 aa12.02□□□□□ -0.49
CTNNA1-236ENST00000522792 CCDC140Q96MF4 163 aa12.02□□□□□ -0.49
CTNNA1-236ENST00000522792 CHRDL1Q9BU40 450 aa12.02□□□□□ -0.49
CTNNA1-236ENST00000522792 MRPL32Q9BYC8 188 aaKnown RBP12.02□□□□□ -0.49
CTNNA1-236ENST00000522792 PRSS22Q9GZN4 317 aa12.02□□□□□ -0.49
CTNNA1-236ENST00000522792 NPFFR1Q9GZQ6 430 aa12.02□□□□□ -0.49
CTNNA1-236ENST00000522792 OR7C2O60412 319 aa12.01□□□□□ -0.49
CTNNA1-236ENST00000522792 PAGE4O60829 102 aa12.01□□□□□ -0.49
CTNNA1-236ENST00000522792 LY6G6DO95868 133 aa12.01□□□□□ -0.49
CTNNA1-236ENST00000522792 CTSGP08311 255 aa12.01□□□□□ -0.49
CTNNA1-236ENST00000522792 C8orf88P0DMB2 117 aa12.01□□□□□ -0.49
CTNNA1-236ENST00000522792 PSMB3P49720 205 aa12.01□□□□□ -0.49
CTNNA1-236ENST00000522792 ZNF329Q86UD4 541 aa12.01□□□□□ -0.49
CTNNA1-236ENST00000522792 OR51G1Q8NGK1 321 aa12.01□□□□□ -0.49
CTNNA1-236ENST00000522792 RNF2Q99496 336 aa12.01□□□□□ -0.49
CTNNA1-236ENST00000522792 TXN2Q99757 166 aa12.01□□□□□ -0.49
CTNNA1-236ENST00000522792 SLC25A2Q9BXI2 301 aa12.01□□□□□ -0.49
CTNNA1-236ENST00000522792 KLK15Q9H2R5 256 aa12.01□□□□□ -0.49
CTNNA1-236ENST00000522792 ZNF702PQ9H963 129 aa12.01□□□□□ -0.49
CTNNA1-236ENST00000522792 VAX2Q9UIW0 290 aa12.01□□□□□ -0.49
CTNNA1-236ENST00000522792 ELOA3CA0A087WX78 387 aaPredicted RBP12.01□□□□□ -0.49
CTNNA1-236ENST00000522792 IGHV3-35A0A0C4DH35 117 aa12.01□□□□□ -0.49
CTNNA1-236ENST00000522792 FAM223BA6NKX1 122 aa12.01□□□□□ -0.49
CTNNA1-236ENST00000522792 IL4P05112 153 aa12.01□□□□□ -0.49
CTNNA1-236ENST00000522792 CLEC3BP05452 202 aa12.01□□□□□ -0.49
CTNNA1-236ENST00000522792 SRP19P09132 144 aaKnown RBP12.01□□□□□ -0.49
CTNNA1-236ENST00000522792 TAS2R45P59539 299 aa12.01□□□□□ -0.49
CTNNA1-236ENST00000522792 PLP1P60201 277 aa12.01□□□□□ -0.49
CTNNA1-236ENST00000522792 CFHR3Q02985 330 aa12.01□□□□□ -0.49
CTNNA1-236ENST00000522792 KIAA0141Q14154 515 aaPredicted RBP12.01□□□□□ -0.49
CTNNA1-236ENST00000522792 FAM223AQ8IWN6 122 aa12.01□□□□□ -0.49
CTNNA1-236ENST00000522792 OR5AU1Q8NGC0 362 aa12.01□□□□□ -0.49
CTNNA1-236ENST00000522792 ZNF503Q96F45 646 aa12.01□□□□□ -0.49
CTNNA1-236ENST00000522792 SLC35B3Q9H1N7 401 aa12.01□□□□□ -0.49
CTNNA1-236ENST00000522792 MANBALQ9NQG1 85 aa12.01□□□□□ -0.49
CTNNA1-236ENST00000522792 DNAJC9-AS1A6NH13 148 aa12□□□□□ -0.49
CTNNA1-236ENST00000522792 NUPL2O15504 423 aaKnown RBP12□□□□□ -0.49
CTNNA1-236ENST00000522792 HSPB1P04792 205 aaKnown RBP12□□□□□ -0.49
CTNNA1-236ENST00000522792 OR10J4P0C629 311 aa12□□□□□ -0.49
CTNNA1-236ENST00000522792 FCGR2BP31994 310 aaPredicted RBP12□□□□□ -0.49
CTNNA1-236ENST00000522792 ADMP35318 185 aa12□□□□□ -0.49
CTNNA1-236ENST00000522792 YPEL3P61236 119 aaPredicted RBP12□□□□□ -0.49
CTNNA1-236ENST00000522792 FAM167A-AS1Q96KT0 104 aa12□□□□□ -0.49
CTNNA1-236ENST00000522792 GNB4Q9HAV0 340 aa12□□□□□ -0.49
CTNNA1-236ENST00000522792 HIGD1AQ9Y241 93 aa12□□□□□ -0.49
CTNNA1-236ENST00000522792 ANK3Q12955 4377 aaKnown RBP12□□□□□ -0.49
CTNNA1-236ENST00000522792 SONP18583 2426 aaKnown RBP12□□□□□ -0.49
CTNNA1-236ENST00000522792 OTOGQ6ZRI0 2925 aa12□□□□□ -0.49
CTNNA1-236ENST00000522792 PMS2P11Q13670 270 aa11.99□□□□□ -0.49
CTNNA1-236ENST00000522792 LEMD1Q68G75 181 aa11.99□□□□□ -0.49
CTNNA1-236ENST00000522792 C10orf99Q6UWK7 81 aa11.99□□□□□ -0.49
CTNNA1-236ENST00000522792 ZNF491Q8N8L2 437 aa11.99□□□□□ -0.49
CTNNA1-236ENST00000522792 CYB561D1Q8N8Q1 229 aa11.99□□□□□ -0.49
CTNNA1-236ENST00000522792 Q8WTZ3 238 aa11.99□□□□□ -0.49
CTNNA1-236ENST00000522792 RNF125Q96EQ8 232 aa11.99□□□□□ -0.49
CTNNA1-236ENST00000522792 SEC11CQ9BY50 192 aa11.99□□□□□ -0.49
CTNNA1-236ENST00000522792 TRBV7-1A0A0A6YYK4 115 aa11.99□□□□□ -0.49
CTNNA1-236ENST00000522792 H3BUA1 57 aa11.99□□□□□ -0.49
CTNNA1-236ENST00000522792 SCGB2A1O75556 95 aa11.99□□□□□ -0.49
CTNNA1-236ENST00000522792 IGLV1-40P01703 118 aa11.99□□□□□ -0.49
CTNNA1-236ENST00000522792 PYYP10082 97 aa11.99□□□□□ -0.49
CTNNA1-236ENST00000522792 NOTCH2Q04721 2471 aa11.99□□□□□ -0.49
CTNNA1-236ENST00000522792 GUCA2BQ16661 112 aa11.99□□□□□ -0.49
CTNNA1-236ENST00000522792 CST9LP1Q5W188 147 aa11.99□□□□□ -0.49
CTNNA1-236ENST00000522792 TMEM86BQ8N661 226 aa11.99□□□□□ -0.49
CTNNA1-236ENST00000522792 SMDT1Q9H4I9 107 aa11.99□□□□□ -0.49
CTNNA1-236ENST00000522792 WI2-2373I1.2A0A1W2PRP0 233 aa11.98□□□□□ -0.49
CTNNA1-236ENST00000522792 IGHV3-11P01762 117 aa11.98□□□□□ -0.49
CTNNA1-236ENST00000522792 SNRPCP09234 159 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms