RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 TOMM40O96008 361 aa10.11□□□□□ -0.79
CPNE3-205ENST00000522240 IGHV3-23P01764 117 aa10.11□□□□□ -0.79
CPNE3-205ENST00000522240 MBP02144 154 aa10.11□□□□□ -0.79
CPNE3-205ENST00000522240 SULT1A2P50226 295 aa10.11□□□□□ -0.79
CPNE3-205ENST00000522240 PROK1P58294 105 aa10.11□□□□□ -0.79
CPNE3-205ENST00000522240 B2MP61769 119 aa10.11□□□□□ -0.79
CPNE3-205ENST00000522240 AKR1C8PQ5T2L2 129 aa10.11□□□□□ -0.79
CPNE3-205ENST00000522240 MIC13Q5XKP0 118 aa10.11□□□□□ -0.79
CPNE3-205ENST00000522240 TMEM182Q6ZP80 229 aaPredicted RBP10.11□□□□□ -0.79
CPNE3-205ENST00000522240 C8orf86Q6ZUL3 223 aa10.11□□□□□ -0.79
CPNE3-205ENST00000522240 BPIFCQ8NFQ6 507 aa10.11□□□□□ -0.79
CPNE3-205ENST00000522240 OR5AU1Q8NGC0 362 aa10.11□□□□□ -0.79
CPNE3-205ENST00000522240 RNF114Q9Y508 228 aa10.11□□□□□ -0.79
CPNE3-205ENST00000522240 CUBNO60494 3623 aa10.11□□□□□ -0.79
CPNE3-205ENST00000522240 OR2T8A6NH00 312 aa10.1□□□□□ -0.79
CPNE3-205ENST00000522240 LGALS1P09382 135 aaKnown RBP10.1□□□□□ -0.79
CPNE3-205ENST00000522240 LINC00869P0C866 280 aa10.1□□□□□ -0.79
CPNE3-205ENST00000522240 ZNF90Q03938 601 aa10.1□□□□□ -0.79
CPNE3-205ENST00000522240 ACOT6Q3I5F7 207 aaPredicted RBP10.1□□□□□ -0.79
CPNE3-205ENST00000522240 TIGITQ495A1 244 aa10.1□□□□□ -0.79
CPNE3-205ENST00000522240 FFAR4Q5NUL3 377 aa10.1□□□□□ -0.79
CPNE3-205ENST00000522240 PXDC1Q5TGL8 231 aa10.1□□□□□ -0.79
CPNE3-205ENST00000522240 CLEC19AQ6UXS0 136 aa10.1□□□□□ -0.79
CPNE3-205ENST00000522240 DPPA3Q6W0C5 159 aa10.1□□□□□ -0.79
CPNE3-205ENST00000522240 ZNF600Q6ZNG1 722 aa10.1□□□□□ -0.79
CPNE3-205ENST00000522240 LCNL1Q6ZST4 164 aa10.1□□□□□ -0.79
CPNE3-205ENST00000522240 LRRC20Q8TCA0 184 aa10.1□□□□□ -0.79
CPNE3-205ENST00000522240 SLC39A9Q9NUM3 307 aa10.1□□□□□ -0.79
CPNE3-205ENST00000522240 ANK2Q01484 3957 aa10.09□□□□□ -0.79
CPNE3-205ENST00000522240 OR2C1O95371 312 aa10.09□□□□□ -0.79
CPNE3-205ENST00000522240 CTSGP08311 255 aa10.09□□□□□ -0.79
CPNE3-205ENST00000522240 M6PRP20645 277 aa10.09□□□□□ -0.79
CPNE3-205ENST00000522240 ADMP35318 185 aa10.09□□□□□ -0.79
CPNE3-205ENST00000522240 CDX1P47902 265 aaPredicted RBP10.09□□□□□ -0.79
CPNE3-205ENST00000522240 ELLP55199 621 aaPredicted RBP10.09□□□□□ -0.79
CPNE3-205ENST00000522240 PLP1P60201 277 aa10.09□□□□□ -0.79
CPNE3-205ENST00000522240 RELQ04864 619 aaPredicted RBP10.09□□□□□ -0.79
CPNE3-205ENST00000522240 ZNF616Q08AN1 781 aa10.09□□□□□ -0.79
CPNE3-205ENST00000522240 TMEM41BQ5BJD5 291 aa10.09□□□□□ -0.79
CPNE3-205ENST00000522240 FAM74A1Q5RGS3 127 aa10.09□□□□□ -0.79
CPNE3-205ENST00000522240 RNF141Q8WVD5 230 aa10.09□□□□□ -0.79
CPNE3-205ENST00000522240 RFNGQ9Y644 331 aa10.09□□□□□ -0.79
CPNE3-205ENST00000522240 YIF1AO95070 293 aa10.08□□□□□ -0.8
CPNE3-205ENST00000522240 IGHV3-11P01762 117 aa10.08□□□□□ -0.8
CPNE3-205ENST00000522240 CLEC3BP05452 202 aa10.08□□□□□ -0.8
CPNE3-205ENST00000522240 RD3LP0DJH9 198 aa10.08□□□□□ -0.8
CPNE3-205ENST00000522240 PSG1P11464 419 aa10.08□□□□□ -0.8
CPNE3-205ENST00000522240 ARL3P36405 182 aa10.08□□□□□ -0.8
CPNE3-205ENST00000522240 SRSF2Q01130 221 aaKnown RBP10.08□□□□□ -0.8
CPNE3-205ENST00000522240 FOXL1Q12952 345 aa10.08□□□□□ -0.8
CPNE3-205ENST00000522240 TCTEX1D4Q5JR98 221 aa10.08□□□□□ -0.8
CPNE3-205ENST00000522240 Q6ZRG5 221 aa10.08□□□□□ -0.8
CPNE3-205ENST00000522240 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.08□□□□□ -0.8
CPNE3-205ENST00000522240 OR51G1Q8NGK1 321 aa10.08□□□□□ -0.8
CPNE3-205ENST00000522240 OR1L4Q8NGR5 311 aa10.08□□□□□ -0.8
CPNE3-205ENST00000522240 C4orf3Q8WVX3 66 aa10.08□□□□□ -0.8
CPNE3-205ENST00000522240 PFDN5Q99471 154 aa10.08□□□□□ -0.8
CPNE3-205ENST00000522240 CHRDL1Q9BU40 450 aa10.08□□□□□ -0.8
CPNE3-205ENST00000522240 C19orf24Q9BVV8 132 aa10.08□□□□□ -0.8
CPNE3-205ENST00000522240 GNB4Q9HAV0 340 aa10.08□□□□□ -0.8
CPNE3-205ENST00000522240 PEF1Q9UBV8 284 aaKnown RBP10.08□□□□□ -0.8
CPNE3-205ENST00000522240 BMPR1BO00238 502 aa10.07□□□□□ -0.8
CPNE3-205ENST00000522240 GATA2P23769 480 aaPredicted RBP10.07□□□□□ -0.8
CPNE3-205ENST00000522240 RAB2AP61019 212 aa10.07□□□□□ -0.8
CPNE3-205ENST00000522240 Q8WTZ3 238 aa10.07□□□□□ -0.8
CPNE3-205ENST00000522240 SAT2Q96F10 170 aaPredicted RBP10.07□□□□□ -0.8
CPNE3-205ENST00000522240 ZNF414Q96IQ9 312 aa10.07□□□□□ -0.8
CPNE3-205ENST00000522240 RNF2Q99496 336 aa10.07□□□□□ -0.8
CPNE3-205ENST00000522240 RPRMQ9NS64 109 aa10.07□□□□□ -0.8
CPNE3-205ENST00000522240 WI2-2373I1.2A0A1W2PRP0 233 aa10.06□□□□□ -0.8
CPNE3-205ENST00000522240 SEC14L6B5MCN3 397 aa10.06□□□□□ -0.8
CPNE3-205ENST00000522240 I3L521 148 aa10.06□□□□□ -0.8
CPNE3-205ENST00000522240 COX7A2P2O60397 106 aa10.06□□□□□ -0.8
CPNE3-205ENST00000522240 GGCTO75223 188 aaKnown RBP10.06□□□□□ -0.8
CPNE3-205ENST00000522240 TRBV12-3P01733 135 aa10.06□□□□□ -0.8
CPNE3-205ENST00000522240 OR5G3P0C626 314 aa10.06□□□□□ -0.8
CPNE3-205ENST00000522240 OR10G4Q8NGN3 311 aa10.06□□□□□ -0.8
CPNE3-205ENST00000522240 OR10G9Q8NGN4 311 aa10.06□□□□□ -0.8
CPNE3-205ENST00000522240 OR10G7Q8NGN6 311 aa10.06□□□□□ -0.8
CPNE3-205ENST00000522240 GATAD1Q8WUU5 269 aa10.06□□□□□ -0.8
CPNE3-205ENST00000522240 RNF125Q96EQ8 232 aa10.06□□□□□ -0.8
CPNE3-205ENST00000522240 MRPL32Q9BYC8 188 aaKnown RBP10.06□□□□□ -0.8
CPNE3-205ENST00000522240 VSIRQ9H7M9 311 aa10.06□□□□□ -0.8
CPNE3-205ENST00000522240 TSSC4Q9Y5U2 329 aaPredicted RBP10.06□□□□□ -0.8
CPNE3-205ENST00000522240 PUS1Q9Y606 427 aaKnown RBP eCLIP10.06□□□□□ -0.8
CPNE3-205ENST00000522240 CTXND1A0A1B0GTU2 59 aa10.05□□□□□ -0.8
CPNE3-205ENST00000522240 ANKRD34BA5PLL1 514 aa10.05□□□□□ -0.8
CPNE3-205ENST00000522240 ZNF705EA8MWA4 302 aaPredicted RBP10.05□□□□□ -0.8
CPNE3-205ENST00000522240 PPP5D1E7EU14 171 aa10.05□□□□□ -0.8
CPNE3-205ENST00000522240 NDUFA4O00483 81 aa10.05□□□□□ -0.8
CPNE3-205ENST00000522240 IL4P05112 153 aa10.05□□□□□ -0.8
CPNE3-205ENST00000522240 CD28P10747 220 aa10.05□□□□□ -0.8
CPNE3-205ENST00000522240 CDC34P49427 236 aaPredicted RBP10.05□□□□□ -0.8
CPNE3-205ENST00000522240 LYZP61626 148 aa10.05□□□□□ -0.8
CPNE3-205ENST00000522240 RHOBP62745 196 aa10.05□□□□□ -0.8
CPNE3-205ENST00000522240 BLOC1S1P78537 153 aa10.05□□□□□ -0.8
CPNE3-205ENST00000522240 KHDC1LQ5JSQ8 128 aa10.05□□□□□ -0.8
CPNE3-205ENST00000522240 CLLU1Q5K131 121 aa10.05□□□□□ -0.8
CPNE3-205ENST00000522240 S100A7AQ86SG5 101 aa10.05□□□□□ -0.8
CPNE3-205ENST00000522240 RPP25LQ8N5L8 163 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms