RNA–Protein interactions for RNA: ENST00000519485.1

CSMD3-209, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 3

Gene CSMD3, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-209ENST00000519485 CLCF1Q9UBD9 225 aa2.81□□□□□ -1.96
CSMD3-209ENST00000519485 TP53TG3Q9ULZ0 132 aa2.81□□□□□ -1.96
CSMD3-209ENST00000519485 RFNGQ9Y644 331 aa2.81□□□□□ -1.96
CSMD3-209ENST00000519485 KMT2EQ8IZD2 1858 aa2.81□□□□□ -1.96
CSMD3-209ENST00000519485 MPDZO75970 2070 aa2.81□□□□□ -1.96
CSMD3-209ENST00000519485 IGKV1-27A0A075B6S5 117 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.8□□□□□ -1.96
CSMD3-209ENST00000519485 MUC21A0A0G2JKD1 596 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 A0A0G2JLM5 398 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 MUC21A0A140T8X8 626 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 A0A1W2PQF6 199 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 ODAMA1E959 279 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 OR2T8A6NH00 312 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 C2orf70A6NJV1 201 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 OR11H12B2RN74 326 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 TMEM262E9PQX1 116 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 C5orf67F2Z3F1 127 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 K7EQM0 130 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 MRPL33O75394 65 aaKnown RBP2.8□□□□□ -1.96
CSMD3-209ENST00000519485 NGFP01138 241 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 IGKV1-39P01597 117 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 IGLV3-19P01714 112 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 IGKV1D-39P04432 117 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 P0C879 139 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 C8orf88P0DMB2 117 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 ZNF32P17041 273 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 GDF1P27539 372 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 S100A7P31151 101 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 MFAP2P55001 183 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 CKS1BP61024 79 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 DEFB103AP81534 67 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 PSG4Q00888 419 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 TFF3Q07654 80 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 RIGQ13278 110 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 PSG5Q15238 335 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 OR1C1Q15619 314 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 TNXAQ16473 311 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 TAL2Q16559 108 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 RSPO1Q2MKA7 263 aaPredicted RBP2.8□□□□□ -1.96
CSMD3-209ENST00000519485 MUC21Q5SSG8 566 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 SPATA46Q5T0L3 261 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 PRAMEF5Q5TYX0 476 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 PRAMEF6Q5VXH4 476 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 CFAP161Q6P656 301 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 LHFPL4Q7Z7J7 247 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 TRPT1Q86TN4 253 aaKnown RBP2.8□□□□□ -1.96
CSMD3-209ENST00000519485 C5orf17Q8NAS9 161 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 OR11H1Q8NG94 326 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 OR1B1Q8NGR6 318 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 OR11H2Q8NH07 326 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 OR4A5Q8NH83 315 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 OR1L1Q8NH94 360 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 PIFOQ8TCI5 191 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 H1FXQ92522 213 aaKnown RBP2.8□□□□□ -1.96
CSMD3-209ENST00000519485 FMC1Q96HJ9 113 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 POM121L2Q96KW2 1035 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 FER1L6-AS2Q96M78 137 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 S1PR3Q99500 378 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 DERL1Q9BUN8 251 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 MRPL16Q9NX20 251 aaKnown RBP2.8□□□□□ -1.96
CSMD3-209ENST00000519485 ZNF492Q9P255 531 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 HIGD1BQ9P298 99 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 PRNDQ9UKY0 176 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 CYSLTR1Q9Y271 337 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 SPCS1Q9Y6A9 102 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 CACNA1CQ13936 2221 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 THADAQ6YHU6 1953 aa2.8□□□□□ -1.96
CSMD3-209ENST00000519485 LTBP2Q14767 1821 aa2.79□□□□□ -1.96
CSMD3-209ENST00000519485 TRAV38-1A0A0B4J264 116 aa2.79□□□□□ -1.96
CSMD3-209ENST00000519485 IGHV5-51A0A0C4DH38 117 aa2.79□□□□□ -1.96
CSMD3-209ENST00000519485 IGKV1-6A0A0C4DH72 117 aa2.79□□□□□ -1.96
CSMD3-209ENST00000519485 A0A0G2JRQ6 117 aa2.79□□□□□ -1.96
CSMD3-209ENST00000519485 A0A1W2PPI3 338 aa2.79□□□□□ -1.96
CSMD3-209ENST00000519485 A0A1W2PPM0 123 aa2.79□□□□□ -1.96
CSMD3-209ENST00000519485 hADV38S2A0JD32 116 aa2.79□□□□□ -1.96
CSMD3-209ENST00000519485 FBLL1A6NHQ2 334 aaKnown RBP2.79□□□□□ -1.96
CSMD3-209ENST00000519485 C2CD4DB7Z1M9 353 aa2.79□□□□□ -1.96
CSMD3-209ENST00000519485 C21orf140B9A014 251 aa2.79□□□□□ -1.96
CSMD3-209ENST00000519485 LMO7DNF2Z398 122 aa2.79□□□□□ -1.96
CSMD3-209ENST00000519485 K7EN84 100 aa2.79□□□□□ -1.96
CSMD3-209ENST00000519485 EFNA2O43921 213 aa2.79□□□□□ -1.96
CSMD3-209ENST00000519485 SNRNP200O75643 2136 aaKnown RBP2.79□□□□□ -1.96
CSMD3-209ENST00000519485 P01737 135 aa2.79□□□□□ -1.96
CSMD3-209ENST00000519485 P04436 131 aa2.79□□□□□ -1.96
CSMD3-209ENST00000519485 PATE4P0C8F1 98 aa2.79□□□□□ -1.96
CSMD3-209ENST00000519485 SPTBP11277 2137 aa2.79□□□□□ -1.96
CSMD3-209ENST00000519485 HLA-DRB4P13762 266 aa2.79□□□□□ -1.96
CSMD3-209ENST00000519485 LIFP15018 202 aa2.79□□□□□ -1.96
CSMD3-209ENST00000519485 MC5RP33032 325 aa2.79□□□□□ -1.96
CSMD3-209ENST00000519485 G6PCP35575 357 aa2.79□□□□□ -1.96
CSMD3-209ENST00000519485 ARL3P36405 182 aa2.79□□□□□ -1.96
CSMD3-209ENST00000519485 LGALS7P47929 136 aa2.79□□□□□ -1.96
CSMD3-209ENST00000519485 SSR4P51571 173 aa2.79□□□□□ -1.96
CSMD3-209ENST00000519485 ERHP84090 104 aaKnown RBP2.79□□□□□ -1.96
CSMD3-209ENST00000519485 AESQ08117 197 aa2.79□□□□□ -1.96
CSMD3-209ENST00000519485 CEACAM16Q2WEN9 425 aa2.79□□□□□ -1.96
CSMD3-209ENST00000519485 LGALS9BQ3B8N2 356 aa2.79□□□□□ -1.96
CSMD3-209ENST00000519485 LINC01545Q5VT33 79 aa2.79□□□□□ -1.96
CSMD3-209ENST00000519485 LYSMD4Q5XG99 296 aa2.79□□□□□ -1.96
CSMD3-209ENST00000519485 LGALS9CQ6DKI2 356 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms