RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 ZFP92A6NM28 416 aa9.82□□□□□ -0.84
VEGFA-219ENST00000518824 IFNA21P01568 189 aa9.82□□□□□ -0.84
VEGFA-219ENST00000518824 HNRNPCP07910 306 aaKnown RBP eCLIP9.82□□□□□ -0.84
VEGFA-219ENST00000518824 GATA2P23769 480 aaPredicted RBP9.82□□□□□ -0.84
VEGFA-219ENST00000518824 ATP5IP56385 69 aaPredicted RBP9.82□□□□□ -0.84
VEGFA-219ENST00000518824 DEFB131AP59861 70 aa9.82□□□□□ -0.84
VEGFA-219ENST00000518824 RAB11AP62491 216 aa9.82□□□□□ -0.84
VEGFA-219ENST00000518824 ASAH1Q13510 395 aa9.82□□□□□ -0.84
VEGFA-219ENST00000518824 LEMD1Q68G75 181 aa9.82□□□□□ -0.84
VEGFA-219ENST00000518824 STXBP6Q8NFX7 210 aa9.82□□□□□ -0.84
VEGFA-219ENST00000518824 MUC7Q8TAX7 377 aa9.82□□□□□ -0.84
VEGFA-219ENST00000518824 CIB3Q96Q77 187 aaPredicted RBP9.82□□□□□ -0.84
VEGFA-219ENST00000518824 PSENENQ9NZ42 101 aa9.82□□□□□ -0.84
VEGFA-219ENST00000518824 GSKIPQ9P0R6 139 aa9.82□□□□□ -0.84
VEGFA-219ENST00000518824 RABAC1Q9UI14 185 aa9.82□□□□□ -0.84
VEGFA-219ENST00000518824 FAM240BA0A1B0GVZ2 78 aa9.81□□□□□ -0.84
VEGFA-219ENST00000518824 K7EQG2 157 aa9.81□□□□□ -0.84
VEGFA-219ENST00000518824 DNASE2O00115 360 aaPredicted RBP9.81□□□□□ -0.84
VEGFA-219ENST00000518824 UPK1BO75841 260 aa9.81□□□□□ -0.84
VEGFA-219ENST00000518824 MBPP02686 304 aaPredicted RBP9.81□□□□□ -0.84
VEGFA-219ENST00000518824 ZNF846Q147U1 533 aa9.81□□□□□ -0.84
VEGFA-219ENST00000518824 ZFAND6Q6FIF0 208 aa9.81□□□□□ -0.84
VEGFA-219ENST00000518824 ACOT7LQ6ZUV0 252 aa9.81□□□□□ -0.84
VEGFA-219ENST00000518824 THAP8Q8NA92 274 aa9.81□□□□□ -0.84
VEGFA-219ENST00000518824 ZNF431Q8TF32 576 aaPredicted RBP9.81□□□□□ -0.84
VEGFA-219ENST00000518824 DCANP1Q8TF63 244 aa9.81□□□□□ -0.84
VEGFA-219ENST00000518824 RNF125Q96EQ8 232 aa9.81□□□□□ -0.84
VEGFA-219ENST00000518824 PBDC1Q9BVG4 233 aa9.81□□□□□ -0.84
VEGFA-219ENST00000518824 STRAPQ9Y3F4 350 aaKnown RBP9.81□□□□□ -0.84
VEGFA-219ENST00000518824 A0A1W2PS18 150 aa9.8□□□□□ -0.84
VEGFA-219ENST00000518824 BUB3O43684 328 aa9.8□□□□□ -0.84
VEGFA-219ENST00000518824 SCGB2A1O75556 95 aa9.8□□□□□ -0.84
VEGFA-219ENST00000518824 BMI1P35226 326 aa9.8□□□□□ -0.84
VEGFA-219ENST00000518824 LYZP61626 148 aa9.8□□□□□ -0.84
VEGFA-219ENST00000518824 ARL16Q0P5N6 197 aa9.8□□□□□ -0.84
VEGFA-219ENST00000518824 DEFB135Q30KP9 77 aa9.8□□□□□ -0.84
VEGFA-219ENST00000518824 OR8G2PQ6IF36 304 aa9.8□□□□□ -0.84
VEGFA-219ENST00000518824 SMIM8Q96KF7 97 aa9.8□□□□□ -0.84
VEGFA-219ENST00000518824 TRGV9Q99603 122 aa9.8□□□□□ -0.84
VEGFA-219ENST00000518824 TMEM231Q9H6L2 316 aa9.8□□□□□ -0.84
VEGFA-219ENST00000518824 KNCNA6PVL3 124 aa9.79□□□□□ -0.84
VEGFA-219ENST00000518824 FAM25EA8MYX2 175 aa9.79□□□□□ -0.84
VEGFA-219ENST00000518824 METTL15P1P0C7V9 234 aa9.79□□□□□ -0.84
VEGFA-219ENST00000518824 ZNF688P0C7X2 276 aa9.79□□□□□ -0.84
VEGFA-219ENST00000518824 RRAS2P62070 204 aaPredicted RBP9.79□□□□□ -0.84
VEGFA-219ENST00000518824 PAFAH1B2P68402 229 aa9.79□□□□□ -0.84
VEGFA-219ENST00000518824 EWSR1Q01844 656 aaKnown RBP eCLIP9.79□□□□□ -0.843e-7■■■□□ 16.8
VEGFA-219ENST00000518824 CASC10Q5T4H9 136 aa9.79□□□□□ -0.84
VEGFA-219ENST00000518824 TMEM14EPQ6UXP3 125 aa9.79□□□□□ -0.84
VEGFA-219ENST00000518824 C12orf45Q8N5I9 185 aaPredicted RBP9.79□□□□□ -0.84
VEGFA-219ENST00000518824 WDR12Q9GZL7 423 aaKnown RBP9.79□□□□□ -0.84
VEGFA-219ENST00000518824 C11orf1Q9H5F2 150 aa9.79□□□□□ -0.84
VEGFA-219ENST00000518824 CSMD3Q7Z407 3707 aa9.79□□□□□ -0.84
VEGFA-219ENST00000518824 TRAV2A0A0B4J234 112 aa9.78□□□□□ -0.84
VEGFA-219ENST00000518824 C7orf66A4D0T2 115 aa9.78□□□□□ -0.84
VEGFA-219ENST00000518824 C3orf84H3BNL1 204 aa9.78□□□□□ -0.84
VEGFA-219ENST00000518824 EIF2B2P49770 351 aaKnown RBP9.78□□□□□ -0.84
VEGFA-219ENST00000518824 RPP30P78346 268 aaKnown RBP9.78□□□□□ -0.84
VEGFA-219ENST00000518824 MZT2BQ6NZ67 158 aa9.78□□□□□ -0.84
VEGFA-219ENST00000518824 NRARPQ7Z6K4 114 aa9.78□□□□□ -0.84
VEGFA-219ENST00000518824 C5orf51A6NDU8 294 aa9.77□□□□□ -0.85
VEGFA-219ENST00000518824 K7EPK0 472 aa9.77□□□□□ -0.85
VEGFA-219ENST00000518824 CD5P06127 495 aa9.77□□□□□ -0.85
VEGFA-219ENST00000518824 DEFB1P60022 68 aa9.77□□□□□ -0.85
VEGFA-219ENST00000518824 AKR1C1Q04828 323 aa9.77□□□□□ -0.85
VEGFA-219ENST00000518824 GRAMD2BQ96HH9 432 aa9.77□□□□□ -0.85
VEGFA-219ENST00000518824 NARS2Q96I59 477 aaKnown RBP9.77□□□□□ -0.85
VEGFA-219ENST00000518824 LSM5Q9Y4Y9 91 aaKnown RBP9.77□□□□□ -0.85
VEGFA-219ENST00000518824 KIR2DL5BA0A0G2JN68 375 aa9.76□□□□□ -0.85
VEGFA-219ENST00000518824 KIR2DL5BA0A0G2JPC4 375 aa9.76□□□□□ -0.85
VEGFA-219ENST00000518824 SMCO3A2RU48 225 aa9.76□□□□□ -0.85
VEGFA-219ENST00000518824 SNRPGP15A8MWD9 76 aa9.76□□□□□ -0.85
VEGFA-219ENST00000518824 SPRY2O43597 315 aa9.76□□□□□ -0.85
VEGFA-219ENST00000518824 SIX6O95475 246 aa9.76□□□□□ -0.85
VEGFA-219ENST00000518824 IL5P05113 134 aa9.76□□□□□ -0.85
VEGFA-219ENST00000518824 GIG44P09565 113 aaPredicted RBP9.76□□□□□ -0.85
VEGFA-219ENST00000518824 LYL1P12980 280 aa9.76□□□□□ -0.85
VEGFA-219ENST00000518824 APOC4P55056 127 aa9.76□□□□□ -0.85
VEGFA-219ENST00000518824 IL15RAQ13261 267 aa9.76□□□□□ -0.85
VEGFA-219ENST00000518824 SIGLEC15Q6ZMC9 328 aa9.76□□□□□ -0.85
VEGFA-219ENST00000518824 TMEM144Q7Z5S9 345 aa9.76□□□□□ -0.85
VEGFA-219ENST00000518824 KIR2DL5AQ8N109 375 aa9.76□□□□□ -0.85
VEGFA-219ENST00000518824 KIR2DL5BQ8NHK3 375 aa9.76□□□□□ -0.85
VEGFA-219ENST00000518824 ENKURQ8TC29 256 aa9.76□□□□□ -0.85
VEGFA-219ENST00000518824 C2orf50Q96LR7 162 aa9.76□□□□□ -0.85
VEGFA-219ENST00000518824 C17orf77Q96MU5 243 aa9.76□□□□□ -0.85
VEGFA-219ENST00000518824 RAB40CQ96S21 281 aa9.76□□□□□ -0.85
VEGFA-219ENST00000518824 BATF3Q9NR55 127 aa9.76□□□□□ -0.85
VEGFA-219ENST00000518824 KMT2CQ8NEZ4 4911 aaKnown RBP9.76□□□□□ -0.85
VEGFA-219ENST00000518824 HELTA6NFD8 242 aa9.75□□□□□ -0.85
VEGFA-219ENST00000518824 FAM24AA6NFZ4 105 aa9.75□□□□□ -0.85
VEGFA-219ENST00000518824 TSC22D2O75157 780 aa9.75□□□□□ -0.85
VEGFA-219ENST00000518824 CMC4P56277 68 aaPredicted RBP9.75□□□□□ -0.85
VEGFA-219ENST00000518824 PSMG4Q5JS54 123 aa9.75□□□□□ -0.85
VEGFA-219ENST00000518824 CYP2G1PQ6ZSU1 146 aa9.75□□□□□ -0.85
VEGFA-219ENST00000518824 Q6ZWC4 215 aa9.75□□□□□ -0.85
VEGFA-219ENST00000518824 RNF183Q96D59 192 aa9.75□□□□□ -0.85
VEGFA-219ENST00000518824 CSTL1Q9H114 145 aa9.75□□□□□ -0.85
VEGFA-219ENST00000518824 DOK5Q9P104 306 aa9.75□□□□□ -0.85
VEGFA-219ENST00000518824 STARD9Q9P2P6 4700 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms