RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 IGHV3-66A0A0C4DH42 116 aa8.31□□□□□ -1.08
SCARNA20-201ENST00000516768 RBMY1BA6NDE4 496 aaKnown RBP8.31□□□□□ -1.08
SCARNA20-201ENST00000516768 RBMY1EA6NEQ0 496 aaKnown RBP8.31□□□□□ -1.08
SCARNA20-201ENST00000516768 OR4C46A6NHA9 309 aa8.31□□□□□ -1.08
SCARNA20-201ENST00000516768 K7EPK0 472 aa8.31□□□□□ -1.08
SCARNA20-201ENST00000516768 FABP1P07148 127 aa8.31□□□□□ -1.08
SCARNA20-201ENST00000516768 HNRNPCP07910 306 aaKnown RBP eCLIP8.31□□□□□ -1.08
SCARNA20-201ENST00000516768 RBMY1DP0C7P1 496 aaKnown RBP8.31□□□□□ -1.08
SCARNA20-201ENST00000516768 CMC4P56277 68 aaPredicted RBP8.31□□□□□ -1.08
SCARNA20-201ENST00000516768 USF2Q15853 346 aaPredicted RBP8.31□□□□□ -1.08
SCARNA20-201ENST00000516768 HAGHQ16775 308 aa8.31□□□□□ -1.08
SCARNA20-201ENST00000516768 TMEM144Q7Z5S9 345 aa8.31□□□□□ -1.08
SCARNA20-201ENST00000516768 NARS2Q96I59 477 aaKnown RBP8.31□□□□□ -1.08
SCARNA20-201ENST00000516768 WFDC10AQ9H1F0 79 aa8.31□□□□□ -1.08
SCARNA20-201ENST00000516768 C11orf1Q9H5F2 150 aa8.31□□□□□ -1.08
SCARNA20-201ENST00000516768 FNDC10F2Z333 226 aa8.3□□□□□ -1.08
SCARNA20-201ENST00000516768 BUB3O43684 328 aa8.3□□□□□ -1.08
SCARNA20-201ENST00000516768 METTL15P1P0C7V9 234 aa8.3□□□□□ -1.08
SCARNA20-201ENST00000516768 P2RY1P47900 373 aa8.3□□□□□ -1.08
SCARNA20-201ENST00000516768 RPL11P62913 178 aaKnown RBP8.3□□□□□ -1.08
SCARNA20-201ENST00000516768 DLK1P80370 383 aa8.3□□□□□ -1.08
SCARNA20-201ENST00000516768 OR8G2PQ6IF36 304 aa8.3□□□□□ -1.08
SCARNA20-201ENST00000516768 C16orf54Q6UWD8 224 aa8.3□□□□□ -1.08
SCARNA20-201ENST00000516768 GBGT1Q8N5D6 347 aa8.3□□□□□ -1.08
SCARNA20-201ENST00000516768 RNF125Q96EQ8 232 aa8.3□□□□□ -1.08
SCARNA20-201ENST00000516768 GRAMD2BQ96HH9 432 aa8.3□□□□□ -1.08
SCARNA20-201ENST00000516768 CITED4Q96RK1 184 aa8.3□□□□□ -1.08
SCARNA20-201ENST00000516768 TM2D3Q9BRN9 247 aa8.3□□□□□ -1.08
SCARNA20-201ENST00000516768 MS4A6AQ9H2W1 248 aa8.3□□□□□ -1.08
SCARNA20-201ENST00000516768 SRD5A3Q9H8P0 318 aa8.3□□□□□ -1.08
SCARNA20-201ENST00000516768 NPVFQ9HCQ7 196 aa8.3□□□□□ -1.08
SCARNA20-201ENST00000516768 RABAC1Q9UI14 185 aa8.3□□□□□ -1.08
SCARNA20-201ENST00000516768 LSM5Q9Y4Y9 91 aaKnown RBP8.3□□□□□ -1.08
SCARNA20-201ENST00000516768 U3KQK5 164 aa8.3□□□□□ -1.08
SCARNA20-201ENST00000516768 IGKV3-7A0A075B6H7 116 aa8.29□□□□□ -1.08
SCARNA20-201ENST00000516768 TRAV2A0A0B4J234 112 aa8.29□□□□□ -1.08
SCARNA20-201ENST00000516768 L7N2F9 121 aa8.29□□□□□ -1.08
SCARNA20-201ENST00000516768 DNASE2O00115 360 aaPredicted RBP8.29□□□□□ -1.08
SCARNA20-201ENST00000516768 DEDDO75618 318 aa8.29□□□□□ -1.08
SCARNA20-201ENST00000516768 CCNKO75909 580 aa8.29□□□□□ -1.08
SCARNA20-201ENST00000516768 CFDP00746 253 aaPredicted RBP8.29□□□□□ -1.08
SCARNA20-201ENST00000516768 TFPI2P48307 235 aa8.29□□□□□ -1.08
SCARNA20-201ENST00000516768 AP2S1P53680 142 aaPredicted RBP8.29□□□□□ -1.08
SCARNA20-201ENST00000516768 VAMP2P63027 116 aa8.29□□□□□ -1.08
SCARNA20-201ENST00000516768 CYCSP99999 105 aaKnown RBP8.29□□□□□ -1.08
SCARNA20-201ENST00000516768 ARL16Q0P5N6 197 aa8.29□□□□□ -1.08
SCARNA20-201ENST00000516768 RAB32Q13637 225 aa8.29□□□□□ -1.08
SCARNA20-201ENST00000516768 ODF3L2Q3SX64 289 aa8.29□□□□□ -1.08
SCARNA20-201ENST00000516768 TMEM182Q6ZP80 229 aaPredicted RBP8.29□□□□□ -1.08
SCARNA20-201ENST00000516768 ACOT7LQ6ZUV0 252 aa8.29□□□□□ -1.08
SCARNA20-201ENST00000516768 GLMPQ8WWB7 406 aa8.29□□□□□ -1.08
SCARNA20-201ENST00000516768 GGACTQ9BVM4 153 aa8.29□□□□□ -1.08
SCARNA20-201ENST00000516768 ZMAT4Q9H898 229 aa8.29□□□□□ -1.08
SCARNA20-201ENST00000516768 UBQLN2Q9UHD9 624 aa8.29□□□□□ -1.08
SCARNA20-201ENST00000516768 PFDN2Q9UHV9 154 aa8.29□□□□□ -1.08
SCARNA20-201ENST00000516768 SIX6O95475 246 aa8.28□□□□□ -1.08
SCARNA20-201ENST00000516768 PVALBP20472 110 aaPredicted RBP8.28□□□□□ -1.08
SCARNA20-201ENST00000516768 EIF2B2P49770 351 aaKnown RBP8.28□□□□□ -1.08
SCARNA20-201ENST00000516768 OR2F1Q13607 317 aa8.28□□□□□ -1.08
SCARNA20-201ENST00000516768 WFDC3Q8IUB2 231 aa8.28□□□□□ -1.08
SCARNA20-201ENST00000516768 STPG3Q8N7X2 389 aa8.28□□□□□ -1.08
SCARNA20-201ENST00000516768 PBDC1Q9BVG4 233 aa8.28□□□□□ -1.08
SCARNA20-201ENST00000516768 NMES1Q9C002 83 aa8.28□□□□□ -1.08
SCARNA20-201ENST00000516768 HELTA6NFD8 242 aa8.27□□□□□ -1.09
SCARNA20-201ENST00000516768 FAM24AA6NFZ4 105 aa8.27□□□□□ -1.09
SCARNA20-201ENST00000516768 K7EQG2 157 aa8.27□□□□□ -1.09
SCARNA20-201ENST00000516768 GOSR2O14653 212 aa8.27□□□□□ -1.09
SCARNA20-201ENST00000516768 PTTG1O95997 202 aa8.27□□□□□ -1.09
SCARNA20-201ENST00000516768 RLN2P04090 185 aa8.27□□□□□ -1.09
SCARNA20-201ENST00000516768 GATA2P23769 480 aaPredicted RBP8.27□□□□□ -1.09
SCARNA20-201ENST00000516768 BCAP31P51572 246 aa8.27□□□□□ -1.09
SCARNA20-201ENST00000516768 CAV2P51636 162 aa8.27□□□□□ -1.09
SCARNA20-201ENST00000516768 H2BFSP57053 126 aa8.27□□□□□ -1.09
SCARNA20-201ENST00000516768 RRAS2P62070 204 aaPredicted RBP8.27□□□□□ -1.09
SCARNA20-201ENST00000516768 AKR1C1Q04828 323 aa8.27□□□□□ -1.09
SCARNA20-201ENST00000516768 C1orf194Q5T5A4 169 aa8.27□□□□□ -1.09
SCARNA20-201ENST00000516768 DCANP1Q8TF63 244 aa8.27□□□□□ -1.09
SCARNA20-201ENST00000516768 LYRM2Q9NU23 88 aaPredicted RBP8.27□□□□□ -1.09
SCARNA20-201ENST00000516768 LOC102724200A0A096LPH7 203 aaPredicted RBP8.26□□□□□ -1.09
SCARNA20-201ENST00000516768 SMCO3A2RU48 225 aa8.26□□□□□ -1.09
SCARNA20-201ENST00000516768 CST7O76096 145 aa8.26□□□□□ -1.09
SCARNA20-201ENST00000516768 S100A11P31949 105 aa8.26□□□□□ -1.09
SCARNA20-201ENST00000516768 NUP62P37198 522 aaPredicted RBP8.26□□□□□ -1.09
SCARNA20-201ENST00000516768 S100A10P60903 97 aa8.26□□□□□ -1.09
SCARNA20-201ENST00000516768 LYZP61626 148 aa8.26□□□□□ -1.09
SCARNA20-201ENST00000516768 SELENOTP62341 195 aa8.26□□□□□ -1.09
SCARNA20-201ENST00000516768 TEPPQ6URK8 271 aa8.26□□□□□ -1.09
SCARNA20-201ENST00000516768 CYP2G1PQ6ZSU1 146 aa8.26□□□□□ -1.09
SCARNA20-201ENST00000516768 APRG1Q8IVJ8 170 aa8.26□□□□□ -1.09
SCARNA20-201ENST00000516768 TMEM252Q8N6L7 170 aa8.26□□□□□ -1.09
SCARNA20-201ENST00000516768 BPIFCQ8NFQ6 507 aa8.26□□□□□ -1.09
SCARNA20-201ENST00000516768 STXBP6Q8NFX7 210 aa8.26□□□□□ -1.09
SCARNA20-201ENST00000516768 RCHY1Q96PM5 261 aa8.26□□□□□ -1.09
SCARNA20-201ENST00000516768 SPATA25Q9BR10 227 aa8.26□□□□□ -1.09
SCARNA20-201ENST00000516768 MGAT4CQ9UBM8 478 aa8.26□□□□□ -1.09
SCARNA20-201ENST00000516768 SLC45A2Q9UMX9 530 aa8.26□□□□□ -1.09
SCARNA20-201ENST00000516768 SSNA1O43805 119 aa8.25□□□□□ -1.09
SCARNA20-201ENST00000516768 ORM2P19652 201 aa8.25□□□□□ -1.09
SCARNA20-201ENST00000516768 SULT1A1P50225 295 aa8.25□□□□□ -1.09
SCARNA20-201ENST00000516768 PLP1P60201 277 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms