RNA–Protein interactions for RNA: ENST00000515682.5

SH3TC1-225, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 4,293 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-225ENST00000515682 UBTD1Q9HAC8 227 aa11.14□□□□□ -0.63
SH3TC1-225ENST00000515682 ERVK11-1P61568 191 aa11.14□□□□□ -0.63
SH3TC1-225ENST00000515682 C5orf17Q8NAS9 161 aa11.14□□□□□ -0.63
SH3TC1-225ENST00000515682 CST9LQ9H4G1 147 aa11.14□□□□□ -0.63
SH3TC1-225ENST00000515682 THYN1Q9P016 225 aa11.14□□□□□ -0.63
SH3TC1-225ENST00000515682 ZNRD1Q9P1U0 126 aa11.14□□□□□ -0.63
SH3TC1-225ENST00000515682 RNF114Q9Y508 228 aa11.14□□□□□ -0.63
SH3TC1-225ENST00000515682 KRTAP27-1Q3LI81 207 aa11.13□□□□□ -0.63
SH3TC1-225ENST00000515682 GPR82Q96P67 336 aa11.13□□□□□ -0.63
SH3TC1-225ENST00000515682 HIF1ANQ9NWT6 349 aa11.13□□□□□ -0.63
SH3TC1-225ENST00000515682 PTPRQQ9UMZ3 2332 aa11.13□□□□□ -0.63
SH3TC1-225ENST00000515682 CEP295Q9C0D2 2601 aa11.13□□□□□ -0.63
SH3TC1-225ENST00000515682 J3QW42 95 aa11.13□□□□□ -0.63
SH3TC1-225ENST00000515682 TIMM23BQ5SRD1 257 aa11.13□□□□□ -0.63
SH3TC1-225ENST00000515682 ST20Q9HBF5 79 aa11.13□□□□□ -0.63
SH3TC1-225ENST00000515682 MRPL27Q9P0M9 148 aaKnown RBP11.13□□□□□ -0.63
SH3TC1-225ENST00000515682 MED13Q9UHV7 2174 aa11.13□□□□□ -0.63
SH3TC1-225ENST00000515682 CPAMD8Q8IZJ3 1885 aa11.13□□□□□ -0.63
SH3TC1-225ENST00000515682 CD69Q07108 199 aa11.13□□□□□ -0.63
SH3TC1-225ENST00000515682 LY6DQ14210 128 aa11.13□□□□□ -0.63
SH3TC1-225ENST00000515682 OR10AG1Q8NH19 301 aa11.13□□□□□ -0.63
SH3TC1-225ENST00000515682 J3QR89 54 aa11.12□□□□□ -0.63
SH3TC1-225ENST00000515682 UPK2O00526 184 aa11.12□□□□□ -0.63
SH3TC1-225ENST00000515682 TP73-AS1Q9UF72 201 aa11.12□□□□□ -0.63
SH3TC1-225ENST00000515682 SYS1-DBNDD2H3BUS1 97 aa11.12□□□□□ -0.63
SH3TC1-225ENST00000515682 ITGB1BP1O14713 200 aa11.12□□□□□ -0.63
SH3TC1-225ENST00000515682 SCGB2A1O75556 95 aa11.12□□□□□ -0.63
SH3TC1-225ENST00000515682 VWC2Q2TAL6 325 aa11.12□□□□□ -0.63
SH3TC1-225ENST00000515682 Q6ZR03 302 aa11.12□□□□□ -0.63
SH3TC1-225ENST00000515682 LINC01560Q8TB33 94 aa11.12□□□□□ -0.63
SH3TC1-225ENST00000515682 SMIM12Q96EX1 92 aa11.12□□□□□ -0.63
SH3TC1-225ENST00000515682 GAGE12BA1L429 117 aa11.12□□□□□ -0.63
SH3TC1-225ENST00000515682 OCIAD2Q56VL3 154 aa11.12□□□□□ -0.63
SH3TC1-225ENST00000515682 RNFT1Q5M7Z0 435 aa11.12□□□□□ -0.63
SH3TC1-225ENST00000515682 EBLN2Q6P2I7 272 aa11.12□□□□□ -0.63
SH3TC1-225ENST00000515682 MRPL20Q9BYC9 149 aaKnown RBP11.12□□□□□ -0.63
SH3TC1-225ENST00000515682 ONECUT1Q9UBC0 465 aa11.12□□□□□ -0.63
SH3TC1-225ENST00000515682 KBTBD11-OT1A0A1B0GTJ5 212 aa11.12□□□□□ -0.63
SH3TC1-225ENST00000515682 COX7A1P24310 79 aa11.12□□□□□ -0.63
SH3TC1-225ENST00000515682 PRCDQ00LT1 54 aa11.12□□□□□ -0.63
SH3TC1-225ENST00000515682 C18orf15Q96N68 181 aa11.12□□□□□ -0.63
SH3TC1-225ENST00000515682 EPDR1Q9UM22 224 aa11.12□□□□□ -0.63
SH3TC1-225ENST00000515682 IGHV2-26A0A0B4J1V2 119 aa11.11□□□□□ -0.63
SH3TC1-225ENST00000515682 IGKV1-16P04430 117 aa11.11□□□□□ -0.63
SH3TC1-225ENST00000515682 C11orf52Q96A22 123 aa11.11□□□□□ -0.63
SH3TC1-225ENST00000515682 HIGD1AQ9Y241 93 aa11.11□□□□□ -0.63
SH3TC1-225ENST00000515682 TRAV8-1A0A0A6YYK1 113 aa11.11□□□□□ -0.63
SH3TC1-225ENST00000515682 FXYD7P58549 80 aa11.11□□□□□ -0.63
SH3TC1-225ENST00000515682 RBPMS2Q6ZRY4 209 aaKnown RBP11.11□□□□□ -0.63
SH3TC1-225ENST00000515682 AAMDCQ9H7C9 122 aa11.11□□□□□ -0.63
SH3TC1-225ENST00000515682 ASCL2Q99929 193 aa11.11□□□□□ -0.63
SH3TC1-225ENST00000515682 RASL11BQ9BPW5 248 aa11.11□□□□□ -0.63
SH3TC1-225ENST00000515682 OR2J3O76001 311 aa11.1□□□□□ -0.63
SH3TC1-225ENST00000515682 FABP2P12104 132 aa11.1□□□□□ -0.63
SH3TC1-225ENST00000515682 TMUB1Q9BVT8 246 aa11.1□□□□□ -0.63
SH3TC1-225ENST00000515682 FAM90A9PA6NNJ1 464 aa11.1□□□□□ -0.63
SH3TC1-225ENST00000515682 ZC2HC1AQ96GY0 325 aa11.1□□□□□ -0.63
SH3TC1-225ENST00000515682 FOXA2Q9Y261 457 aaPredicted RBP11.1□□□□□ -0.63
SH3TC1-225ENST00000515682 ZNF134P52741 427 aa11.1□□□□□ -0.63
SH3TC1-225ENST00000515682 PRB3Q04118 309 aaPredicted RBP11.1□□□□□ -0.63
SH3TC1-225ENST00000515682 MSRB2Q9Y3D2 182 aa11.1□□□□□ -0.63
SH3TC1-225ENST00000515682 CHD9Q3L8U1 2897 aa11.1□□□□□ -0.63
SH3TC1-225ENST00000515682 IGKV1D-17A0A075B6S4 117 aa11.09□□□□□ -0.63
SH3TC1-225ENST00000515682 A1L4Q6 167 aa11.09□□□□□ -0.63
SH3TC1-225ENST00000515682 SS18L1O75177 396 aaPredicted RBP11.09□□□□□ -0.63
SH3TC1-225ENST00000515682 PAX1P15863 534 aa11.09□□□□□ -0.63
SH3TC1-225ENST00000515682 PPIAL4EA0A075B759 164 aa11.09□□□□□ -0.63
SH3TC1-225ENST00000515682 PPIAL4FP0DN26 164 aa11.09□□□□□ -0.63
SH3TC1-225ENST00000515682 CCL3L1P16619 93 aa11.09□□□□□ -0.63
SH3TC1-225ENST00000515682 RPL27AP46776 148 aaKnown RBP11.09□□□□□ -0.63
SH3TC1-225ENST00000515682 PSG9Q00887 426 aa11.09□□□□□ -0.63
SH3TC1-225ENST00000515682 HIST1H1AQ02539 215 aaPredicted RBP11.09□□□□□ -0.63
SH3TC1-225ENST00000515682 A0A1B0GUT8 65 aa11.09□□□□□ -0.63
SH3TC1-225ENST00000515682 GLRXP35754 106 aa11.09□□□□□ -0.63
SH3TC1-225ENST00000515682 BRWD1-AS2P59051 145 aa11.09□□□□□ -0.63
SH3TC1-225ENST00000515682 Q9H3A6 140 aa11.09□□□□□ -0.63
SH3TC1-225ENST00000515682 C1orf162Q8NEQ5 155 aaPredicted RBP11.09□□□□□ -0.63
SH3TC1-225ENST00000515682 SPCS1Q9Y6A9 102 aa11.09□□□□□ -0.63
SH3TC1-225ENST00000515682 NDUFB8O95169 186 aa11.08□□□□□ -0.64
SH3TC1-225ENST00000515682 TMEM97Q5BJF2 176 aa11.08□□□□□ -0.64
SH3TC1-225ENST00000515682 Q6ZS92 163 aa11.08□□□□□ -0.64
SH3TC1-225ENST00000515682 LINC00173Q6ZV60 143 aa11.08□□□□□ -0.64
SH3TC1-225ENST00000515682 KIR3DL3Q8N743 410 aa11.08□□□□□ -0.64
SH3TC1-225ENST00000515682 KMT2EQ8IZD2 1858 aa11.08□□□□□ -0.64
SH3TC1-225ENST00000515682 ZNF207O43670 478 aaKnown RBP11.08□□□□□ -0.64
SH3TC1-225ENST00000515682 CKS2P33552 79 aa11.08□□□□□ -0.64
SH3TC1-225ENST00000515682 CIARTQ8N365 385 aaPredicted RBP11.08□□□□□ -0.64
SH3TC1-225ENST00000515682 ZNF714Q96N38 554 aa11.08□□□□□ -0.64
SH3TC1-225ENST00000515682 VCANP13611 3396 aa11.08□□□□□ -0.64
SH3TC1-225ENST00000515682 IGLC7A0M8Q6 106 aa11.08□□□□□ -0.64
SH3TC1-225ENST00000515682 ORM1P02763 201 aa11.08□□□□□ -0.64
SH3TC1-225ENST00000515682 CACNG8Q8WXS5 425 aa11.08□□□□□ -0.64
SH3TC1-225ENST00000515682 SMIM27A0A1W2PRY6 76 aa11.07□□□□□ -0.64
SH3TC1-225ENST00000515682 CD40P25942 277 aa11.07□□□□□ -0.64
SH3TC1-225ENST00000515682 LINC00310P59036 64 aa11.07□□□□□ -0.64
SH3TC1-225ENST00000515682 SP5Q6BEB4 398 aaPredicted RBP11.07□□□□□ -0.64
SH3TC1-225ENST00000515682 OR4C13Q8NGP0 309 aa11.07□□□□□ -0.64
SH3TC1-225ENST00000515682 LSM4Q9Y4Z0 139 aaKnown RBP11.07□□□□□ -0.64
SH3TC1-225ENST00000515682 S4R3C0 116 aa11.07□□□□□ -0.64
SH3TC1-225ENST00000515682 SRRM5B3KS81 715 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms