RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 NPBWR1P48145 328 aa7.13□□□□□ -1.27
CPNE4-213ENST00000515418 KIAA0141Q14154 515 aaPredicted RBP7.13□□□□□ -1.27
CPNE4-213ENST00000515418 GUCA2BQ16661 112 aa7.13□□□□□ -1.27
CPNE4-213ENST00000515418 ZNF506Q5JVG8 444 aa7.13□□□□□ -1.27
CPNE4-213ENST00000515418 C10orf113Q5VZT2 155 aa7.13□□□□□ -1.27
CPNE4-213ENST00000515418 LEMD1Q68G75 181 aa7.13□□□□□ -1.27
CPNE4-213ENST00000515418 C16orf82Q7Z2V1 217 aa7.13□□□□□ -1.27
CPNE4-213ENST00000515418 OR5R1Q8NH85 324 aa7.13□□□□□ -1.27
CPNE4-213ENST00000515418 ZNF503Q96F45 646 aa7.13□□□□□ -1.27
CPNE4-213ENST00000515418 CHRDL1Q9BU40 450 aa7.13□□□□□ -1.27
CPNE4-213ENST00000515418 KLK15Q9H2R5 256 aa7.13□□□□□ -1.27
CPNE4-213ENST00000515418 PRDM13Q9H4Q3 707 aa7.13□□□□□ -1.27
CPNE4-213ENST00000515418 VPREB3Q9UKI3 123 aa7.13□□□□□ -1.27
CPNE4-213ENST00000515418 BAHCC1Q9P281 2608 aa7.13□□□□□ -1.27
CPNE4-213ENST00000515418 IGHV3OR16-8A0A075B7F1 116 aa7.13□□□□□ -1.27
CPNE4-213ENST00000515418 HSPB1P04792 205 aaKnown RBP7.13□□□□□ -1.27
CPNE4-213ENST00000515418 OR10J4P0C629 311 aa7.13□□□□□ -1.27
CPNE4-213ENST00000515418 BCL2P10415 239 aa7.13□□□□□ -1.27
CPNE4-213ENST00000515418 PPIFP30405 207 aaKnown RBP7.13□□□□□ -1.27
CPNE4-213ENST00000515418 LYZP61626 148 aa7.13□□□□□ -1.27
CPNE4-213ENST00000515418 ATRAIDQ6UW56 229 aa7.13□□□□□ -1.27
CPNE4-213ENST00000515418 C10orf99Q6UWK7 81 aa7.13□□□□□ -1.27
CPNE4-213ENST00000515418 LINC00305Q7Z4B0 112 aa7.13□□□□□ -1.27
CPNE4-213ENST00000515418 NECAP1Q8NC96 275 aa7.13□□□□□ -1.27
CPNE4-213ENST00000515418 TMEM68Q96MH6 324 aa7.13□□□□□ -1.27
CPNE4-213ENST00000515418 SLC35B3Q9H1N7 401 aa7.13□□□□□ -1.27
CPNE4-213ENST00000515418 HYPMO75409 117 aa7.12□□□□□ -1.27
CPNE4-213ENST00000515418 CXorf1O96002 111 aa7.12□□□□□ -1.27
CPNE4-213ENST00000515418 TRGV3P03979 118 aa7.12□□□□□ -1.27
CPNE4-213ENST00000515418 SRP19P09132 144 aaKnown RBP7.12□□□□□ -1.27
CPNE4-213ENST00000515418 HIST1H1BP16401 226 aaKnown RBP7.12□□□□□ -1.27
CPNE4-213ENST00000515418 GCHFRP30047 84 aa7.12□□□□□ -1.27
CPNE4-213ENST00000515418 GPR183P32249 361 aa7.12□□□□□ -1.27
CPNE4-213ENST00000515418 ADMP35318 185 aa7.12□□□□□ -1.27
CPNE4-213ENST00000515418 CRIP2P52943 208 aaPredicted RBP7.12□□□□□ -1.27
CPNE4-213ENST00000515418 CD81P60033 236 aa7.12□□□□□ -1.27
CPNE4-213ENST00000515418 KHDC3LQ587J8 217 aa7.12□□□□□ -1.27
CPNE4-213ENST00000515418 C10orf91Q5T1B1 145 aa7.12□□□□□ -1.27
CPNE4-213ENST00000515418 CLEC19AQ6UXS0 136 aa7.12□□□□□ -1.27
CPNE4-213ENST00000515418 RBMS3Q6XE24 437 aaKnown RBP7.12□□□□□ -1.27
CPNE4-213ENST00000515418 Q71RC1 249 aaPredicted RBP7.12□□□□□ -1.27
CPNE4-213ENST00000515418 CYB561D1Q8N8Q1 229 aa7.12□□□□□ -1.27
CPNE4-213ENST00000515418 OR51G1Q8NGK1 321 aa7.12□□□□□ -1.27
CPNE4-213ENST00000515418 ZNF502Q8TBZ5 544 aa7.12□□□□□ -1.27
CPNE4-213ENST00000515418 FAM167A-AS1Q96KT0 104 aa7.12□□□□□ -1.27
CPNE4-213ENST00000515418 SLC25A2Q9BXI2 301 aa7.12□□□□□ -1.27
CPNE4-213ENST00000515418 VAX2Q9UIW0 290 aa7.12□□□□□ -1.27
CPNE4-213ENST00000515418 AP4M1O00189 453 aa7.11□□□□□ -1.27
CPNE4-213ENST00000515418 OR7C2O60412 319 aa7.11□□□□□ -1.27
CPNE4-213ENST00000515418 PYYP10082 97 aa7.11□□□□□ -1.27
CPNE4-213ENST00000515418 PSMB3P49720 205 aa7.11□□□□□ -1.27
CPNE4-213ENST00000515418 ATP5G2Q06055 141 aa7.11□□□□□ -1.27
CPNE4-213ENST00000515418 CST9LP1Q5W188 147 aa7.11□□□□□ -1.27
CPNE4-213ENST00000515418 ZNF491Q8N8L2 437 aa7.11□□□□□ -1.27
CPNE4-213ENST00000515418 OR1L4Q8NGR5 311 aa7.11□□□□□ -1.27
CPNE4-213ENST00000515418 VN1R17PQ8TDU5 208 aa7.11□□□□□ -1.27
CPNE4-213ENST00000515418 CCDC140Q96MF4 163 aa7.11□□□□□ -1.27
CPNE4-213ENST00000515418 C19orf24Q9BVV8 132 aa7.11□□□□□ -1.27
CPNE4-213ENST00000515418 SEC11CQ9BY50 192 aa7.11□□□□□ -1.27
CPNE4-213ENST00000515418 TECRQ9NZ01 308 aaKnown RBP7.11□□□□□ -1.27
CPNE4-213ENST00000515418 ELOA3CA0A087WX78 387 aaPredicted RBP7.11□□□□□ -1.27
CPNE4-213ENST00000515418 LY6G6DO95868 133 aa7.11□□□□□ -1.27
CPNE4-213ENST00000515418 IL4P05112 153 aa7.11□□□□□ -1.27
CPNE4-213ENST00000515418 C8orf88P0DMB2 117 aa7.11□□□□□ -1.27
CPNE4-213ENST00000515418 PF4V1P10720 104 aa7.11□□□□□ -1.27
CPNE4-213ENST00000515418 ATP5G3P48201 142 aa7.11□□□□□ -1.27
CPNE4-213ENST00000515418 TPPP2P59282 170 aa7.11□□□□□ -1.27
CPNE4-213ENST00000515418 MEF2BQ02080 365 aaPredicted RBP7.11□□□□□ -1.27
CPNE4-213ENST00000515418 PMS2P11Q13670 270 aa7.11□□□□□ -1.27
CPNE4-213ENST00000515418 KLK9Q2XQG4 91 aa7.11□□□□□ -1.27
CPNE4-213ENST00000515418 OR5AU1Q8NGC0 362 aa7.11□□□□□ -1.27
CPNE4-213ENST00000515418 OR4F5Q8NH21 305 aa7.11□□□□□ -1.27
CPNE4-213ENST00000515418 OR4F4Q96R69 305 aa7.11□□□□□ -1.27
CPNE4-213ENST00000515418 PFDN5Q99471 154 aa7.11□□□□□ -1.27
CPNE4-213ENST00000515418 KLK9Q9UKQ9 250 aa7.11□□□□□ -1.27
CPNE4-213ENST00000515418 YTHDF2Q9Y5A9 579 aaKnown RBP7.11□□□□□ -1.27
CPNE4-213ENST00000515418 NSD1Q96L73 2696 aaPredicted RBP7.1□□□□□ -1.27
CPNE4-213ENST00000515418 TRAV30A0A087WSZ9 112 aa7.1□□□□□ -1.27
CPNE4-213ENST00000515418 PPP5D1E7EU14 171 aa7.1□□□□□ -1.27
CPNE4-213ENST00000515418 TSPAN9O75954 239 aa7.1□□□□□ -1.27
CPNE4-213ENST00000515418 TOMM40O96008 361 aa7.1□□□□□ -1.27
CPNE4-213ENST00000515418 IFNA1P01562 189 aa7.1□□□□□ -1.27
CPNE4-213ENST00000515418 IGHV3-11P01762 117 aa7.1□□□□□ -1.27
CPNE4-213ENST00000515418 YPEL3P61236 119 aaPredicted RBP7.1□□□□□ -1.27
CPNE4-213ENST00000515418 USF2Q15853 346 aaPredicted RBP7.1□□□□□ -1.27
CPNE4-213ENST00000515418 SOHLH1Q5JUK2 328 aa7.1□□□□□ -1.27
CPNE4-213ENST00000515418 ZNF414Q96IQ9 312 aa7.1□□□□□ -1.27
CPNE4-213ENST00000515418 ZNF702PQ9H963 129 aa7.1□□□□□ -1.27
CPNE4-213ENST00000515418 GNB4Q9HAV0 340 aa7.1□□□□□ -1.27
CPNE4-213ENST00000515418 MRPL27Q9P0M9 148 aaKnown RBP7.1□□□□□ -1.27
CPNE4-213ENST00000515418 HIGD1AQ9Y241 93 aa7.1□□□□□ -1.27
CPNE4-213ENST00000515418 PUS1Q9Y606 427 aaKnown RBP eCLIP7.1□□□□□ -1.27
CPNE4-213ENST00000515418 WI2-2373I1.2A0A1W2PRP0 233 aa7.09□□□□□ -1.27
CPNE4-213ENST00000515418 C11orf94C9JXX5 98 aa7.09□□□□□ -1.27
CPNE4-213ENST00000515418 H3BTX0 84 aa7.09□□□□□ -1.27
CPNE4-213ENST00000515418 NUPL2O15504 423 aaKnown RBP7.09□□□□□ -1.27
CPNE4-213ENST00000515418 IGLV1-40P01703 118 aa7.09□□□□□ -1.27
CPNE4-213ENST00000515418 TRBV12-3P01733 135 aa7.09□□□□□ -1.27
CPNE4-213ENST00000515418 NPPCP23582 126 aa7.09□□□□□ -1.27
CPNE4-213ENST00000515418 FCGR2BP31994 310 aaPredicted RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms