RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 IGKV1OR2-108A0A075B7D4 117 aa8.46□□□□□ -1.06
VCAN-212ENST00000515397 A6NHS1 94 aa8.46□□□□□ -1.06
VCAN-212ENST00000515397 K7EQG2 157 aa8.46□□□□□ -1.06
VCAN-212ENST00000515397 CCNKO75909 580 aa8.46□□□□□ -1.06
VCAN-212ENST00000515397 SCGB1D2O95969 90 aa8.46□□□□□ -1.06
VCAN-212ENST00000515397 GATA2P23769 480 aaPredicted RBP8.46□□□□□ -1.06
VCAN-212ENST00000515397 APOC4P55056 127 aa8.46□□□□□ -1.06
VCAN-212ENST00000515397 LYZP61626 148 aa8.46□□□□□ -1.06
VCAN-212ENST00000515397 ID3Q02535 119 aa8.46□□□□□ -1.06
VCAN-212ENST00000515397 C16orf54Q6UWD8 224 aa8.46□□□□□ -1.06
VCAN-212ENST00000515397 OR4D5Q8NGN0 318 aa8.46□□□□□ -1.06
VCAN-212ENST00000515397 GLMPQ8WWB7 406 aa8.46□□□□□ -1.06
VCAN-212ENST00000515397 NARS2Q96I59 477 aaKnown RBP8.46□□□□□ -1.06
VCAN-212ENST00000515397 C7orf50Q9BRJ6 194 aaKnown RBP8.46□□□□□ -1.06
VCAN-212ENST00000515397 CSTL1Q9H114 145 aa8.46□□□□□ -1.06
VCAN-212ENST00000515397 C20orf85Q9H1P6 137 aa8.46□□□□□ -1.06
VCAN-212ENST00000515397 A0A0J9YWU9 116 aa8.45□□□□□ -1.06
VCAN-212ENST00000515397 FAM90A26D6RGX4 464 aa8.45□□□□□ -1.06
VCAN-212ENST00000515397 SSSCA1O60232 199 aa8.45□□□□□ -1.06
VCAN-212ENST00000515397 IFNA21P01568 189 aa8.45□□□□□ -1.06
VCAN-212ENST00000515397 TCRBP04435 133 aa8.45□□□□□ -1.06
VCAN-212ENST00000515397 DEFB1P60022 68 aa8.45□□□□□ -1.06
VCAN-212ENST00000515397 IAH1Q2TAA2 248 aaPredicted RBP8.45□□□□□ -1.06
VCAN-212ENST00000515397 OR8G2PQ6IF36 304 aa8.45□□□□□ -1.06
VCAN-212ENST00000515397 TMEM182Q6ZP80 229 aaPredicted RBP8.45□□□□□ -1.06
VCAN-212ENST00000515397 RNF125Q96EQ8 232 aa8.45□□□□□ -1.06
VCAN-212ENST00000515397 GRAMD2BQ96HH9 432 aa8.45□□□□□ -1.06
VCAN-212ENST00000515397 PSENENQ9NZ42 101 aa8.45□□□□□ -1.06
VCAN-212ENST00000515397 STRAPQ9Y3F4 350 aaKnown RBP8.45□□□□□ -1.06
VCAN-212ENST00000515397 DYNC2H1Q8NCM8 4307 aaKnown RBP8.44□□□□□ -1.06
VCAN-212ENST00000515397 PIGBOS1A0A0B4J2F0 54 aa8.44□□□□□ -1.06
VCAN-212ENST00000515397 SMCO3A2RU48 225 aa8.44□□□□□ -1.06
VCAN-212ENST00000515397 FAM25EA8MYX2 175 aa8.44□□□□□ -1.06
VCAN-212ENST00000515397 PRSS46E5RG02 174 aa8.44□□□□□ -1.06
VCAN-212ENST00000515397 BUB3O43684 328 aa8.44□□□□□ -1.06
VCAN-212ENST00000515397 CD5P06127 495 aa8.44□□□□□ -1.06
VCAN-212ENST00000515397 NKX2-1P43699 371 aaPredicted RBP8.44□□□□□ -1.06
VCAN-212ENST00000515397 PAX9P55771 341 aa8.44□□□□□ -1.06
VCAN-212ENST00000515397 CMC4P56277 68 aaPredicted RBP8.44□□□□□ -1.06
VCAN-212ENST00000515397 ATP5IP56385 69 aaPredicted RBP8.44□□□□□ -1.06
VCAN-212ENST00000515397 RRAS2P62070 204 aaPredicted RBP8.44□□□□□ -1.06
VCAN-212ENST00000515397 PSMG4Q5JS54 123 aa8.44□□□□□ -1.06
VCAN-212ENST00000515397 Q6ZWC4 215 aa8.44□□□□□ -1.06
VCAN-212ENST00000515397 ZBTB8BQ8NAP8 495 aaPredicted RBP8.44□□□□□ -1.06
VCAN-212ENST00000515397 DCANP1Q8TF63 244 aa8.44□□□□□ -1.06
VCAN-212ENST00000515397 MITD1Q8WV92 249 aa8.44□□□□□ -1.06
VCAN-212ENST00000515397 RNF183Q96D59 192 aa8.44□□□□□ -1.06
VCAN-212ENST00000515397 CIB3Q96Q77 187 aaPredicted RBP8.44□□□□□ -1.06
VCAN-212ENST00000515397 NUDT15Q9NV35 164 aa8.44□□□□□ -1.06
VCAN-212ENST00000515397 TBC1D24Q9ULP9 559 aa8.44□□□□□ -1.06
VCAN-212ENST00000515397 KIR2DL5BA0A0G2JN68 375 aa8.43□□□□□ -1.06
VCAN-212ENST00000515397 KIR2DL5BA0A0G2JPC4 375 aa8.43□□□□□ -1.06
VCAN-212ENST00000515397 SNRPGP15A8MWD9 76 aa8.43□□□□□ -1.06
VCAN-212ENST00000515397 UBE2CO00762 179 aa8.43□□□□□ -1.06
VCAN-212ENST00000515397 DEFB4AO15263 64 aa8.43□□□□□ -1.06
VCAN-212ENST00000515397 CA1P00915 261 aaPredicted RBP8.43□□□□□ -1.06
VCAN-212ENST00000515397 METTL15P1P0C7V9 234 aa8.43□□□□□ -1.06
VCAN-212ENST00000515397 EIF2B2P49770 351 aaKnown RBP8.43□□□□□ -1.06
VCAN-212ENST00000515397 RPP30P78346 268 aaKnown RBP8.43□□□□□ -1.06
VCAN-212ENST00000515397 PMS2P11Q13670 270 aa8.43□□□□□ -1.06
VCAN-212ENST00000515397 ACTL10Q5JWF8 245 aa8.43□□□□□ -1.06
VCAN-212ENST00000515397 ACOT7LQ6ZUV0 252 aa8.43□□□□□ -1.06
VCAN-212ENST00000515397 KIR2DL5AQ8N109 375 aa8.43□□□□□ -1.06
VCAN-212ENST00000515397 KIR2DL5BQ8NHK3 375 aa8.43□□□□□ -1.06
VCAN-212ENST00000515397 PPP1R14BQ96C90 147 aa8.43□□□□□ -1.06
VCAN-212ENST00000515397 TRGV9Q99603 122 aa8.43□□□□□ -1.06
VCAN-212ENST00000515397 TRAV2A0A0B4J234 112 aa8.42□□□□□ -1.06
VCAN-212ENST00000515397 HELTA6NFD8 242 aa8.42□□□□□ -1.06
VCAN-212ENST00000515397 MBPP02686 304 aaPredicted RBP8.42□□□□□ -1.06
VCAN-212ENST00000515397 H2AFB2P0C5Z0 115 aa8.42□□□□□ -1.06
VCAN-212ENST00000515397 ORM2P19652 201 aa8.42□□□□□ -1.06
VCAN-212ENST00000515397 IFITM3Q01628 133 aa8.42□□□□□ -1.06
VCAN-212ENST00000515397 AKR1C1Q04828 323 aa8.42□□□□□ -1.06
VCAN-212ENST00000515397 SIGLEC15Q6ZMC9 328 aa8.42□□□□□ -1.06
VCAN-212ENST00000515397 STHQ8IWL8 128 aa8.42□□□□□ -1.06
VCAN-212ENST00000515397 THAP8Q8NA92 274 aa8.42□□□□□ -1.06
VCAN-212ENST00000515397 RAB40CQ96S21 281 aa8.42□□□□□ -1.06
VCAN-212ENST00000515397 CCDC32Q9BV29 185 aa8.42□□□□□ -1.06
VCAN-212ENST00000515397 WDR12Q9GZL7 423 aaKnown RBP8.42□□□□□ -1.06
VCAN-212ENST00000515397 CLEC5AQ9NY25 188 aa8.42□□□□□ -1.06
VCAN-212ENST00000515397 DOK5Q9P104 306 aa8.42□□□□□ -1.06
VCAN-212ENST00000515397 RCL1Q9Y2P8 373 aaKnown RBP8.42□□□□□ -1.06
VCAN-212ENST00000515397 FAM240BA0A1B0GVZ2 78 aa8.41□□□□□ -1.06
VCAN-212ENST00000515397 C5orf51A6NDU8 294 aa8.41□□□□□ -1.06
VCAN-212ENST00000515397 PMS2P5A8MQ11 134 aa8.41□□□□□ -1.06
VCAN-212ENST00000515397 GIG44P09565 113 aaPredicted RBP8.41□□□□□ -1.06
VCAN-212ENST00000515397 ARL16Q0P5N6 197 aa8.41□□□□□ -1.06
VCAN-212ENST00000515397 IL17DQ8TAD2 202 aa8.41□□□□□ -1.06
VCAN-212ENST00000515397 ZNF431Q8TF32 576 aaPredicted RBP8.41□□□□□ -1.06
VCAN-212ENST00000515397 SMIM8Q96KF7 97 aa8.41□□□□□ -1.06
VCAN-212ENST00000515397 LINC00052Q96N35 136 aa8.41□□□□□ -1.06
VCAN-212ENST00000515397 RARRES2Q99969 163 aa8.41□□□□□ -1.06
VCAN-212ENST00000515397 TP53TG1Q9Y2A0 90 aa8.41□□□□□ -1.06
VCAN-212ENST00000515397 LSM5Q9Y4Y9 91 aaKnown RBP8.41□□□□□ -1.06
VCAN-212ENST00000515397 LYSTQ99698 3801 aa8.4□□□□□ -1.06
VCAN-212ENST00000515397 C7orf66A4D0T2 115 aa8.4□□□□□ -1.06
VCAN-212ENST00000515397 IGKV3-20P01619 116 aa8.4□□□□□ -1.06
VCAN-212ENST00000515397 PRB4P10163 310 aaPredicted RBP8.4□□□□□ -1.06
VCAN-212ENST00000515397 AP2S1P53680 142 aaPredicted RBP8.4□□□□□ -1.06
VCAN-212ENST00000515397 OR8I2Q8N0Y5 310 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms