RNA–Protein interactions for RNA: ENST00000515145.1

TNFRSF25-220, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 4

Gene TNFRSF25, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-220ENST00000515145 FBXL17Q9UF56 701 aa11.92□□□□□ -0.5
TNFRSF25-220ENST00000515145 U3KQ87 197 aa11.92□□□□□ -0.5
TNFRSF25-220ENST00000515145 SPP1P10451 314 aa11.91□□□□□ -0.5
TNFRSF25-220ENST00000515145 SRPXP78539 464 aa11.91□□□□□ -0.5
TNFRSF25-220ENST00000515145 TMEM41BQ5BJD5 291 aa11.91□□□□□ -0.5
TNFRSF25-220ENST00000515145 LGI3Q8N145 548 aa11.91□□□□□ -0.5
TNFRSF25-220ENST00000515145 WDR12Q9GZL7 423 aaKnown RBP11.91□□□□□ -0.5
TNFRSF25-220ENST00000515145 RD3LP0DJH9 198 aa11.9□□□□□ -0.5
TNFRSF25-220ENST00000515145 ANXA3P12429 323 aa11.9□□□□□ -0.5
TNFRSF25-220ENST00000515145 AP2S1P53680 142 aaPredicted RBP11.9□□□□□ -0.5
TNFRSF25-220ENST00000515145 BAK1Q16611 211 aa11.9□□□□□ -0.5
TNFRSF25-220ENST00000515145 PSMG4Q5JS54 123 aa11.9□□□□□ -0.5
TNFRSF25-220ENST00000515145 ACTL10Q5JWF8 245 aa11.9□□□□□ -0.5
TNFRSF25-220ENST00000515145 FRAS1Q86XX4 4008 aa11.9□□□□□ -0.5
TNFRSF25-220ENST00000515145 IGHV4-28A0A0C4DH34 117 aa11.89□□□□□ -0.51
TNFRSF25-220ENST00000515145 FAM90A26D6RGX4 464 aa11.89□□□□□ -0.51
TNFRSF25-220ENST00000515145 BUB3O43684 328 aa11.89□□□□□ -0.51
TNFRSF25-220ENST00000515145 PSG1P11464 419 aa11.89□□□□□ -0.51
TNFRSF25-220ENST00000515145 FAUP35544 74 aaKnown RBP11.89□□□□□ -0.51
TNFRSF25-220ENST00000515145 IFITM3Q01628 133 aa11.89□□□□□ -0.51
TNFRSF25-220ENST00000515145 ZNF846Q147U1 533 aa11.89□□□□□ -0.51
TNFRSF25-220ENST00000515145 LGALS9CQ6DKI2 356 aa11.89□□□□□ -0.51
TNFRSF25-220ENST00000515145 OR1S1Q8NH92 325 aa11.89□□□□□ -0.51
TNFRSF25-220ENST00000515145 CCDC32Q9BV29 185 aa11.89□□□□□ -0.51
TNFRSF25-220ENST00000515145 NRN1Q9NPD7 142 aa11.89□□□□□ -0.51
TNFRSF25-220ENST00000515145 DUXBA0A1W2PPF3 345 aa11.88□□□□□ -0.51
TNFRSF25-220ENST00000515145 ZNF705EA8MWA4 302 aaPredicted RBP11.88□□□□□ -0.51
TNFRSF25-220ENST00000515145 IFNA4P05014 189 aa11.88□□□□□ -0.51
TNFRSF25-220ENST00000515145 RBMY1A1P0DJD3 496 aaKnown RBP11.88□□□□□ -0.51
TNFRSF25-220ENST00000515145 RBMY1CP0DJD4 496 aa11.88□□□□□ -0.51
TNFRSF25-220ENST00000515145 IL7P13232 177 aa11.88□□□□□ -0.51
TNFRSF25-220ENST00000515145 RBMY1FQ15415 496 aaKnown RBP11.88□□□□□ -0.51
TNFRSF25-220ENST00000515145 SIGLEC15Q6ZMC9 328 aa11.88□□□□□ -0.51
TNFRSF25-220ENST00000515145 TMED4Q7Z7H5 227 aa11.88□□□□□ -0.51
TNFRSF25-220ENST00000515145 RPP25LQ8N5L8 163 aaKnown RBP11.88□□□□□ -0.51
TNFRSF25-220ENST00000515145 OR51G1Q8NGK1 321 aa11.88□□□□□ -0.51
TNFRSF25-220ENST00000515145 RNF125Q96EQ8 232 aa11.88□□□□□ -0.51
TNFRSF25-220ENST00000515145 RAB40CQ96S21 281 aa11.88□□□□□ -0.51
TNFRSF25-220ENST00000515145 X6R8D5 127 aa11.88□□□□□ -0.51
TNFRSF25-220ENST00000515145 IGKV1D-37A0A075B6S9 117 aa11.87□□□□□ -0.51
TNFRSF25-220ENST00000515145 PITX3O75364 302 aa11.87□□□□□ -0.51
TNFRSF25-220ENST00000515145 DEDDO75618 318 aa11.87□□□□□ -0.51
TNFRSF25-220ENST00000515145 MIFP14174 115 aa11.87□□□□□ -0.51
TNFRSF25-220ENST00000515145 ATP5IP56385 69 aaPredicted RBP11.87□□□□□ -0.51
TNFRSF25-220ENST00000515145 AP3S2P59780 193 aa11.87□□□□□ -0.51
TNFRSF25-220ENST00000515145 GAMTQ14353 236 aa11.87□□□□□ -0.51
TNFRSF25-220ENST00000515145 PYDC2Q56P42 97 aa11.87□□□□□ -0.51
TNFRSF25-220ENST00000515145 TMEM128Q5BJH2 165 aa11.87□□□□□ -0.51
TNFRSF25-220ENST00000515145 TOMM5Q8N4H5 51 aa11.87□□□□□ -0.51
TNFRSF25-220ENST00000515145 CSNK1G2-AS1Q8NCQ2 148 aa11.87□□□□□ -0.51
TNFRSF25-220ENST00000515145 SLC35E1Q96K37 410 aa11.87□□□□□ -0.51
TNFRSF25-220ENST00000515145 HRH4Q9H3N8 390 aa11.87□□□□□ -0.51
TNFRSF25-220ENST00000515145 SEPSECSQ9HD40 501 aaKnown RBP11.87□□□□□ -0.51
TNFRSF25-220ENST00000515145 CLEC5AQ9NY25 188 aa11.87□□□□□ -0.51
TNFRSF25-220ENST00000515145 PIGBOS1A0A0B4J2F0 54 aa11.86□□□□□ -0.51
TNFRSF25-220ENST00000515145 GPX4P36969 197 aaPredicted RBP11.86□□□□□ -0.51
TNFRSF25-220ENST00000515145 NUP62P37198 522 aaPredicted RBP11.86□□□□□ -0.51
TNFRSF25-220ENST00000515145 SNRPD3P62318 126 aaKnown RBP11.86□□□□□ -0.51
TNFRSF25-220ENST00000515145 OR8G2PQ6IF36 304 aa11.86□□□□□ -0.51
TNFRSF25-220ENST00000515145 LRTM2Q8N967 370 aa11.86□□□□□ -0.51
TNFRSF25-220ENST00000515145 PBDC1Q9BVG4 233 aa11.86□□□□□ -0.51
TNFRSF25-220ENST00000515145 ZFP92A6NM28 416 aa11.85□□□□□ -0.51
TNFRSF25-220ENST00000515145 IAPPP10997 89 aa11.85□□□□□ -0.51
TNFRSF25-220ENST00000515145 VAMP1P23763 118 aa11.85□□□□□ -0.51
TNFRSF25-220ENST00000515145 ZNF90Q03938 601 aa11.85□□□□□ -0.51
TNFRSF25-220ENST00000515145 C2CD4CQ8TF44 421 aa11.85□□□□□ -0.51
TNFRSF25-220ENST00000515145 TBC1D24Q9ULP9 559 aa11.85□□□□□ -0.51
TNFRSF25-220ENST00000515145 ELOA3CA0A087WX78 387 aaPredicted RBP11.84□□□□□ -0.51
TNFRSF25-220ENST00000515145 H3BMM0 161 aa11.84□□□□□ -0.51
TNFRSF25-220ENST00000515145 UPK1BO75841 260 aa11.84□□□□□ -0.51
TNFRSF25-220ENST00000515145 SLC25A6P12236 298 aa11.84□□□□□ -0.51
TNFRSF25-220ENST00000515145 BTCP35070 178 aa11.84□□□□□ -0.51
TNFRSF25-220ENST00000515145 DEDD2Q8WXF8 326 aa11.84□□□□□ -0.51
TNFRSF25-220ENST00000515145 SLC25A21Q9BQT8 299 aaPredicted RBP11.84□□□□□ -0.51
TNFRSF25-220ENST00000515145 C11orf94C9JXX5 98 aa11.83□□□□□ -0.52
TNFRSF25-220ENST00000515145 PLA2G10O15496 165 aa11.83□□□□□ -0.52
TNFRSF25-220ENST00000515145 SFT2D2O95562 160 aa11.83□□□□□ -0.52
TNFRSF25-220ENST00000515145 HLA-DRB4P13762 266 aa11.83□□□□□ -0.52
TNFRSF25-220ENST00000515145 HLA-DMBP28068 263 aa11.83□□□□□ -0.52
TNFRSF25-220ENST00000515145 TCTAP57738 103 aa11.83□□□□□ -0.52
TNFRSF25-220ENST00000515145 LYZP61626 148 aa11.83□□□□□ -0.52
TNFRSF25-220ENST00000515145 PPP1R1AQ13522 171 aa11.83□□□□□ -0.52
TNFRSF25-220ENST00000515145 TRGV9Q99603 122 aa11.83□□□□□ -0.52
TNFRSF25-220ENST00000515145 HLA-DRB4X5D2U9 266 aa11.83□□□□□ -0.52
TNFRSF25-220ENST00000515145 IGKV1OR2-108A0A075B7D4 117 aa11.82□□□□□ -0.52
TNFRSF25-220ENST00000515145 FABP1P07148 127 aa11.82□□□□□ -0.52
TNFRSF25-220ENST00000515145 NKX2-1P43699 371 aaPredicted RBP11.82□□□□□ -0.52
TNFRSF25-220ENST00000515145 RAB11AP62491 216 aa11.82□□□□□ -0.52
TNFRSF25-220ENST00000515145 OR2F1Q13607 317 aa11.82□□□□□ -0.52
TNFRSF25-220ENST00000515145 Q6ZTC4 211 aa11.82□□□□□ -0.52
TNFRSF25-220ENST00000515145 THAP8Q8NA92 274 aa11.82□□□□□ -0.52
TNFRSF25-220ENST00000515145 C1QTNF4Q9BXJ3 329 aa11.82□□□□□ -0.52
TNFRSF25-220ENST00000515145 PFDN2Q9UHV9 154 aa11.82□□□□□ -0.52
TNFRSF25-220ENST00000515145 APLNQ9ULZ1 77 aa11.82□□□□□ -0.52
TNFRSF25-220ENST00000515145 TMED3Q9Y3Q3 217 aa11.82□□□□□ -0.52
TNFRSF25-220ENST00000515145 HERC2O95714 4834 aa11.82□□□□□ -0.52
TNFRSF25-220ENST00000515145 IGLL5B9A064 214 aa11.81□□□□□ -0.52
TNFRSF25-220ENST00000515145 PRSS46E5RG02 174 aa11.81□□□□□ -0.52
TNFRSF25-220ENST00000515145 SOCS3O14543 225 aa11.81□□□□□ -0.52
TNFRSF25-220ENST00000515145 DEFB1P60022 68 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms