RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 RAB4BP61018 213 aa1.12□□□□□ -2.23
HMGCS1-207ENST00000514610 RHOGP84095 191 aa1.12□□□□□ -2.23
HMGCS1-207ENST00000514610 TSNQ15631 228 aaKnown RBP1.12□□□□□ -2.23
HMGCS1-207ENST00000514610 DEFB113Q30KQ7 82 aa1.12□□□□□ -2.23
HMGCS1-207ENST00000514610 FAM172AQ8WUF8 416 aa1.12□□□□□ -2.23
HMGCS1-207ENST00000514610 NMNAT1Q9HAN9 279 aaPredicted RBP1.12□□□□□ -2.23
HMGCS1-207ENST00000514610 EPDR1Q9UM22 224 aa1.12□□□□□ -2.23
HMGCS1-207ENST00000514610 ARL2BPQ9Y2Y0 163 aa1.12□□□□□ -2.23
HMGCS1-207ENST00000514610 UTP11Q9Y3A2 253 aaKnown RBP1.12□□□□□ -2.23
HMGCS1-207ENST00000514610 NUP98P52948 1817 aa1.12□□□□□ -2.23
HMGCS1-207ENST00000514610 EML5Q05BV3 1969 aa1.12□□□□□ -2.23
HMGCS1-207ENST00000514610 CHD3Q12873 2000 aaKnown RBP1.11□□□□□ -2.23
HMGCS1-207ENST00000514610 TMEM210A6NLX4 147 aa1.11□□□□□ -2.23
HMGCS1-207ENST00000514610 LYZL6O75951 148 aa1.11□□□□□ -2.23
HMGCS1-207ENST00000514610 LINC00301Q8NCQ3 95 aa1.11□□□□□ -2.23
HMGCS1-207ENST00000514610 CHMP6Q96FZ7 201 aa1.11□□□□□ -2.23
HMGCS1-207ENST00000514610 KLK9Q9UKQ9 250 aa1.11□□□□□ -2.23
HMGCS1-207ENST00000514610 MYH3P11055 1940 aa1.11□□□□□ -2.23
HMGCS1-207ENST00000514610 ALPK3Q96L96 1907 aa1.11□□□□□ -2.23
HMGCS1-207ENST00000514610 LOC110117498A0A087WWA1 95 aa1.1□□□□□ -2.23
HMGCS1-207ENST00000514610 A0A087WX48 190 aa1.1□□□□□ -2.23
HMGCS1-207ENST00000514610 TRBV6-8A0A0A6YYG3 113 aa1.1□□□□□ -2.23
HMGCS1-207ENST00000514610 TRAV4A0A0B4J268 109 aa1.1□□□□□ -2.23
HMGCS1-207ENST00000514610 J3QRK9 145 aa1.1□□□□□ -2.23
HMGCS1-207ENST00000514610 HMGB3O15347 200 aaKnown RBP1.1□□□□□ -2.23
HMGCS1-207ENST00000514610 HYPMO75409 117 aa1.1□□□□□ -2.23
HMGCS1-207ENST00000514610 PROSCO94903 275 aa1.1□□□□□ -2.23
HMGCS1-207ENST00000514610 CST2P09228 141 aa1.1□□□□□ -2.23
HMGCS1-207ENST00000514610 HSD11B1P28845 292 aa1.1□□□□□ -2.23
HMGCS1-207ENST00000514610 PIGPP57054 158 aa1.1□□□□□ -2.23
HMGCS1-207ENST00000514610 LYRM7Q5U5X0 104 aa1.1□□□□□ -2.23
HMGCS1-207ENST00000514610 OR2T10Q8NGZ9 312 aa1.1□□□□□ -2.23
HMGCS1-207ENST00000514610 OR10J5Q8NHC4 309 aa1.1□□□□□ -2.23
HMGCS1-207ENST00000514610 GNPDA2Q8TDQ7 276 aa1.1□□□□□ -2.23
HMGCS1-207ENST00000514610 SFT2D1Q8WV19 159 aa1.1□□□□□ -2.23
HMGCS1-207ENST00000514610 SLAMF6Q96DU3 332 aa1.1□□□□□ -2.23
HMGCS1-207ENST00000514610 OBSCN-AS1Q96MR7 158 aa1.1□□□□□ -2.23
HMGCS1-207ENST00000514610 NHP2Q9NX24 153 aaKnown RBP1.1□□□□□ -2.23
HMGCS1-207ENST00000514610 N4BP2Q86UW6 1770 aaPredicted RBP1.1□□□□□ -2.23
HMGCS1-207ENST00000514610 SNRNP200O75643 2136 aaKnown RBP1.1□□□□□ -2.23
HMGCS1-207ENST00000514610 MYLKQ15746 1914 aa1.09□□□□□ -2.23
HMGCS1-207ENST00000514610 TRBV6-7A0A0A0MS04 114 aa1.09□□□□□ -2.23
HMGCS1-207ENST00000514610 TRAV12-1A0A0B4J245 112 aa1.09□□□□□ -2.23
HMGCS1-207ENST00000514610 C7orf71A4D174 169 aa1.09□□□□□ -2.23
HMGCS1-207ENST00000514610 CYBAP13498 195 aa1.09□□□□□ -2.23
HMGCS1-207ENST00000514610 ATP5G3P48201 142 aa1.09□□□□□ -2.23
HMGCS1-207ENST00000514610 TAF1AQ15573 450 aaPredicted RBP1.09□□□□□ -2.23
HMGCS1-207ENST00000514610 ESRGQ1W209 222 aa1.09□□□□□ -2.23
HMGCS1-207ENST00000514610 PHB2Q99623 299 aa1.09□□□□□ -2.23
HMGCS1-207ENST00000514610 C9orf16Q9BUW7 83 aa1.09□□□□□ -2.23
HMGCS1-207ENST00000514610 TMEM133Q9H2Q1 129 aa1.09□□□□□ -2.23
HMGCS1-207ENST00000514610 BCL2L10Q9HD36 194 aa1.09□□□□□ -2.23
HMGCS1-207ENST00000514610 OPTCQ9UBM4 332 aa1.09□□□□□ -2.23
HMGCS1-207ENST00000514610 HS3ST2Q9Y278 367 aa1.09□□□□□ -2.23
HMGCS1-207ENST00000514610 FMN1Q68DA7 1419 aa1.08□□□□□ -2.24
HMGCS1-207ENST00000514610 MIA2Q96PC5 1412 aa1.08□□□□□ -2.24
HMGCS1-207ENST00000514610 ATP5HO75947 161 aa1.08□□□□□ -2.24
HMGCS1-207ENST00000514610 GADD45GO95257 159 aa1.08□□□□□ -2.24
HMGCS1-207ENST00000514610 RNASE4P34096 147 aaKnown RBP1.08□□□□□ -2.24
HMGCS1-207ENST00000514610 ANP32AP39687 249 aaKnown RBP1.08□□□□□ -2.24
HMGCS1-207ENST00000514610 CNBPP62633 177 aaKnown RBP1.08□□□□□ -2.24
HMGCS1-207ENST00000514610 DYNLT1P63172 113 aa1.08□□□□□ -2.24
HMGCS1-207ENST00000514610 EIF5AP63241 154 aaKnown RBP1.08□□□□□ -2.24
HMGCS1-207ENST00000514610 MRPS15P82914 257 aaKnown RBP1.08□□□□□ -2.24
HMGCS1-207ENST00000514610 DEFB115Q30KQ5 88 aa1.08□□□□□ -2.24
HMGCS1-207ENST00000514610 AKIRIN2Q53H80 203 aa1.08□□□□□ -2.24
HMGCS1-207ENST00000514610 SOSTDC1Q6X4U4 206 aa1.08□□□□□ -2.24
HMGCS1-207ENST00000514610 GOLT1AQ6ZVE7 132 aa1.08□□□□□ -2.24
HMGCS1-207ENST00000514610 CLECL1Q8IZS7 167 aa1.08□□□□□ -2.24
HMGCS1-207ENST00000514610 SLC30A7Q8NEW0 376 aa1.08□□□□□ -2.24
HMGCS1-207ENST00000514610 OR10X1Q8NGY0 326 aa1.08□□□□□ -2.24
HMGCS1-207ENST00000514610 STAG3L4Q8TBR4 150 aa1.08□□□□□ -2.24
HMGCS1-207ENST00000514610 PRADC1Q9BSG0 188 aa1.08□□□□□ -2.24
HMGCS1-207ENST00000514610 C6orf62Q9GZU0 229 aaPredicted RBP1.08□□□□□ -2.24
HMGCS1-207ENST00000514610 RNF122Q9H9V4 155 aa1.08□□□□□ -2.24
HMGCS1-207ENST00000514610 E9PCH4 1651 aa1.07□□□□□ -2.24
HMGCS1-207ENST00000514610 PEAK1Q9H792 1746 aa1.07□□□□□ -2.24
HMGCS1-207ENST00000514610 KIAA1549Q9HCM3 1950 aa1.07□□□□□ -2.24
HMGCS1-207ENST00000514610 CCDC160A6NGH7 325 aa1.07□□□□□ -2.24
HMGCS1-207ENST00000514610 SRP14P37108 136 aaKnown RBP1.07□□□□□ -2.24
HMGCS1-207ENST00000514610 KRR1Q13601 381 aaKnown RBP1.07□□□□□ -2.24
HMGCS1-207ENST00000514610 C3orf56Q8N813 242 aa1.07□□□□□ -2.24
HMGCS1-207ENST00000514610 OR11H6Q8NGC7 330 aa1.07□□□□□ -2.24
HMGCS1-207ENST00000514610 ZFP30Q9Y2G7 519 aa1.07□□□□□ -2.24
HMGCS1-207ENST00000514610 ADGRL3Q9HAR2 1447 aa1.06□□□□□ -2.24
HMGCS1-207ENST00000514610 UNC13CQ8NB66 2214 aa1.06□□□□□ -2.24
HMGCS1-207ENST00000514610 CST8O60676 142 aa1.06□□□□□ -2.24
HMGCS1-207ENST00000514610 TIMM17BO60830 172 aa1.06□□□□□ -2.24
HMGCS1-207ENST00000514610 CAPZBP47756 277 aa1.06□□□□□ -2.24
HMGCS1-207ENST00000514610 TMED2Q15363 201 aa1.06□□□□□ -2.24
HMGCS1-207ENST00000514610 C1orf137Q5JT78 98 aa1.06□□□□□ -2.24
HMGCS1-207ENST00000514610 ZNF418Q8TF45 676 aaPredicted RBP1.06□□□□□ -2.24
HMGCS1-207ENST00000514610 PARVBQ9HBI1 364 aa1.06□□□□□ -2.24
HMGCS1-207ENST00000514610 ACER3Q9NUN7 267 aa1.06□□□□□ -2.24
HMGCS1-207ENST00000514610 ARMC1Q9NVT9 282 aa1.06□□□□□ -2.24
HMGCS1-207ENST00000514610 RASL12Q9NYN1 266 aa1.06□□□□□ -2.24
HMGCS1-207ENST00000514610 PTPRFP10586 1907 aa1.05□□□□□ -2.24
HMGCS1-207ENST00000514610 MYO18AQ92614 2054 aaKnown RBP1.05□□□□□ -2.24
HMGCS1-207ENST00000514610 TRBV19A0A075B6N1 114 aa1.05□□□□□ -2.24
HMGCS1-207ENST00000514610 MRPS25P82663 173 aaKnown RBP1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms