RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 CBLN2Q8IUK8 224 aa6.58□□□□□ -1.36
RNF4-220ENST00000513578 IQCF2Q8IXL9 164 aa6.58□□□□□ -1.36
RNF4-220ENST00000513578 OR51G1Q8NGK1 321 aa6.58□□□□□ -1.36
RNF4-220ENST00000513578 UHRF2Q96PU4 802 aa6.58□□□□□ -1.36
RNF4-220ENST00000513578 SSX3Q99909 188 aa6.58□□□□□ -1.36
RNF4-220ENST00000513578 SMIM7Q9BQ49 75 aa6.58□□□□□ -1.36
RNF4-220ENST00000513578 HSPB9Q9BQS6 159 aa6.58□□□□□ -1.36
RNF4-220ENST00000513578 FAM103A1Q9BTL3 118 aaKnown RBP6.58□□□□□ -1.36
RNF4-220ENST00000513578 CTDSP1Q9GZU7 261 aa6.58□□□□□ -1.36
RNF4-220ENST00000513578 PARLQ9H300 379 aa6.58□□□□□ -1.36
RNF4-220ENST00000513578 MRPL27Q9P0M9 148 aaKnown RBP6.58□□□□□ -1.36
RNF4-220ENST00000513578 PITPNC1Q9UKF7 332 aa6.58□□□□□ -1.36
RNF4-220ENST00000513578 YTHDF2Q9Y5A9 579 aaKnown RBP6.58□□□□□ -1.36
RNF4-220ENST00000513578 LY96Q9Y6Y9 160 aa6.58□□□□□ -1.36
RNF4-220ENST00000513578 TRBV9A0A0B4J1U6 114 aa6.57□□□□□ -1.36
RNF4-220ENST00000513578 WI2-2373I1.2A0A1W2PRP0 233 aa6.57□□□□□ -1.36
RNF4-220ENST00000513578 COLCA2A8K830 154 aa6.57□□□□□ -1.36
RNF4-220ENST00000513578 SCGB2A1O75556 95 aa6.57□□□□□ -1.36
RNF4-220ENST00000513578 OR2C1O95371 312 aa6.57□□□□□ -1.36
RNF4-220ENST00000513578 AVPP01185 164 aa6.57□□□□□ -1.36
RNF4-220ENST00000513578 IGHV3-48P01763 117 aa6.57□□□□□ -1.36
RNF4-220ENST00000513578 AMY1AP04745 511 aa6.57□□□□□ -1.36
RNF4-220ENST00000513578 IGF1P05019 195 aa6.57□□□□□ -1.36
RNF4-220ENST00000513578 PSG1P11464 419 aa6.57□□□□□ -1.36
RNF4-220ENST00000513578 FOLR2P14207 255 aa6.57□□□□□ -1.36
RNF4-220ENST00000513578 COL8A1P27658 744 aa6.57□□□□□ -1.36
RNF4-220ENST00000513578 ATP5G3P48201 142 aa6.57□□□□□ -1.36
RNF4-220ENST00000513578 RNF212Q495C1 297 aa6.57□□□□□ -1.36
RNF4-220ENST00000513578 CST9LP1Q5W188 147 aa6.57□□□□□ -1.36
RNF4-220ENST00000513578 ZNF343Q6P1L6 599 aa6.57□□□□□ -1.36
RNF4-220ENST00000513578 TMEM88Q6PEY1 159 aa6.57□□□□□ -1.36
RNF4-220ENST00000513578 BRD3OSQ6XYD6 125 aa6.57□□□□□ -1.36
RNF4-220ENST00000513578 LINC00305Q7Z4B0 112 aa6.57□□□□□ -1.36
RNF4-220ENST00000513578 RPUSD4Q96CM3 377 aaKnown RBP6.57□□□□□ -1.36
RNF4-220ENST00000513578 YPEL4Q96NS1 127 aa6.57□□□□□ -1.36
RNF4-220ENST00000513578 OR51M1Q9H341 326 aa6.57□□□□□ -1.36
RNF4-220ENST00000513578 ZNF355PQ9NSJ1 428 aa6.57□□□□□ -1.36
RNF4-220ENST00000513578 GAR1Q9NY12 217 aaKnown RBP6.57□□□□□ -1.36
RNF4-220ENST00000513578 TMEM14CQ9P0S9 112 aa6.57□□□□□ -1.36
RNF4-220ENST00000513578 RNF24Q9Y225 148 aa6.57□□□□□ -1.36
RNF4-220ENST00000513578 C9JCJ5 164 aa6.56□□□□□ -1.36
RNF4-220ENST00000513578 F8W735 103 aaPredicted RBP6.56□□□□□ -1.36
RNF4-220ENST00000513578 H3BUA1 57 aa6.56□□□□□ -1.36
RNF4-220ENST00000513578 ATP6V0E1O15342 81 aa6.56□□□□□ -1.36
RNF4-220ENST00000513578 NUPL2O15504 423 aaKnown RBP6.56□□□□□ -1.36
RNF4-220ENST00000513578 OR7C2O60412 319 aa6.56□□□□□ -1.36
RNF4-220ENST00000513578 NDUFB8O95169 186 aa6.56□□□□□ -1.36
RNF4-220ENST00000513578 IGHG2P01859 326 aa6.56□□□□□ -1.36
RNF4-220ENST00000513578 MT-ND4LP03901 98 aa6.56□□□□□ -1.36
RNF4-220ENST00000513578 RD3LP0DJH9 198 aa6.56□□□□□ -1.36
RNF4-220ENST00000513578 IGHV4-31P0DP07 118 aa6.56□□□□□ -1.36
RNF4-220ENST00000513578 CD99P14209 185 aa6.56□□□□□ -1.36
RNF4-220ENST00000513578 CEBPGP53567 150 aa6.56□□□□□ -1.36
RNF4-220ENST00000513578 UBE2G2P60604 165 aa6.56□□□□□ -1.36
RNF4-220ENST00000513578 RPL23P62829 140 aaKnown RBP6.56□□□□□ -1.36
RNF4-220ENST00000513578 TIGITQ495A1 244 aa6.56□□□□□ -1.36
RNF4-220ENST00000513578 Q5PR19 223 aa6.56□□□□□ -1.36
RNF4-220ENST00000513578 MORN5Q5VZ52 161 aa6.56□□□□□ -1.36
RNF4-220ENST00000513578 UNQ5815/PRO19632Q6UWF5 114 aa6.56□□□□□ -1.36
RNF4-220ENST00000513578 KRTAP1-3Q8IUG1 177 aa6.56□□□□□ -1.36
RNF4-220ENST00000513578 ZNF491Q8N8L2 437 aa6.56□□□□□ -1.36
RNF4-220ENST00000513578 NECAP1Q8NC96 275 aa6.56□□□□□ -1.36
RNF4-220ENST00000513578 OR5AU1Q8NGC0 362 aa6.56□□□□□ -1.36
RNF4-220ENST00000513578 FXYD5Q96DB9 178 aa6.56□□□□□ -1.36
RNF4-220ENST00000513578 ANAPC16Q96DE5 110 aa6.56□□□□□ -1.36
RNF4-220ENST00000513578 PAXXQ9BUH6 204 aa6.56□□□□□ -1.36
RNF4-220ENST00000513578 C20orf24Q9BUV8 137 aa6.56□□□□□ -1.36
RNF4-220ENST00000513578 PRDM13Q9H4Q3 707 aa6.56□□□□□ -1.36
RNF4-220ENST00000513578 C21orf62Q9NYP8 219 aa6.56□□□□□ -1.36
RNF4-220ENST00000513578 HIGD1AQ9Y241 93 aa6.56□□□□□ -1.36
RNF4-220ENST00000513578 ABCA1O95477 2261 aa6.56□□□□□ -1.36
RNF4-220ENST00000513578 IGHV3OR16-10A0A075B7F0 116 aa6.55□□□□□ -1.36
RNF4-220ENST00000513578 IGHV3-21A0A0B4J1V1 117 aa6.55□□□□□ -1.36
RNF4-220ENST00000513578 TRAV5A0A0B4J249 113 aa6.55□□□□□ -1.36
RNF4-220ENST00000513578 GNG7O60262 68 aa6.55□□□□□ -1.36
RNF4-220ENST00000513578 NDUFB4O95168 129 aa6.55□□□□□ -1.36
RNF4-220ENST00000513578 ORM2P19652 201 aa6.55□□□□□ -1.36
RNF4-220ENST00000513578 S100A7P31151 101 aa6.55□□□□□ -1.36
RNF4-220ENST00000513578 MYCNOSP40205 109 aa6.55□□□□□ -1.36
RNF4-220ENST00000513578 UBE2L3P68036 154 aaKnown RBP6.55□□□□□ -1.36
RNF4-220ENST00000513578 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.55□□□□□ -1.36
RNF4-220ENST00000513578 OR5T1Q8NG75 326 aa6.55□□□□□ -1.36
RNF4-220ENST00000513578 OR1B1Q8NGR6 318 aa6.55□□□□□ -1.36
RNF4-220ENST00000513578 ZNF502Q8TBZ5 544 aa6.55□□□□□ -1.36
RNF4-220ENST00000513578 Q8WTZ3 238 aa6.55□□□□□ -1.36
RNF4-220ENST00000513578 HIST1H2BAQ96A08 127 aa6.55□□□□□ -1.36
RNF4-220ENST00000513578 SHANK2-AS3Q9BTD1 123 aa6.55□□□□□ -1.36
RNF4-220ENST00000513578 FBXL7Q9UJT9 491 aa6.55□□□□□ -1.36
RNF4-220ENST00000513578 TRBV7-1A0A0A6YYK4 115 aa6.54□□□□□ -1.36
RNF4-220ENST00000513578 TRAV41A0A0B4J266 112 aa6.54□□□□□ -1.36
RNF4-220ENST00000513578 FAM223BA6NKX1 122 aa6.54□□□□□ -1.36
RNF4-220ENST00000513578 RNF223E7ERA6 249 aa6.54□□□□□ -1.36
RNF4-220ENST00000513578 H3BRN7 92 aa6.54□□□□□ -1.36
RNF4-220ENST00000513578 H3BUX3 64 aa6.54□□□□□ -1.36
RNF4-220ENST00000513578 CLDN34H7C241 214 aa6.54□□□□□ -1.36
RNF4-220ENST00000513578 OR2J3O76001 311 aa6.54□□□□□ -1.36
RNF4-220ENST00000513578 TGFAP01135 160 aa6.54□□□□□ -1.36
RNF4-220ENST00000513578 CTSGP08311 255 aa6.54□□□□□ -1.36
RNF4-220ENST00000513578 HIST1H1EP10412 219 aaKnown RBP6.54□□□□□ -1.36
RNF4-220ENST00000513578 GP9P14770 177 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms