RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 NSG2Q9Y328 171 aa3.26□□□□□ -1.89
HTT-211ENST00000513326 F11RQ9Y624 299 aaKnown RBP3.26□□□□□ -1.89
HTT-211ENST00000513326 LRP2P98164 4655 aa3.26□□□□□ -1.89
HTT-211ENST00000513326 DNAH8Q96JB1 4490 aa3.25□□□□□ -1.89
HTT-211ENST00000513326 E5RGE8 158 aa3.25□□□□□ -1.89
HTT-211ENST00000513326 SULT1C2O00338 296 aa3.25□□□□□ -1.89
HTT-211ENST00000513326 MFNGO00587 321 aa3.25□□□□□ -1.89
HTT-211ENST00000513326 P2RY1P47900 373 aa3.25□□□□□ -1.89
HTT-211ENST00000513326 KRTAP10-4P60372 401 aaPredicted RBP3.25□□□□□ -1.89
HTT-211ENST00000513326 DAD1P61803 113 aa3.25□□□□□ -1.89
HTT-211ENST00000513326 PAFAH1B2P68402 229 aa3.25□□□□□ -1.89
HTT-211ENST00000513326 OXA1LQ15070 435 aa3.25□□□□□ -1.89
HTT-211ENST00000513326 RBM48Q5RL73 367 aaKnown RBP3.25□□□□□ -1.89
HTT-211ENST00000513326 HOGA1Q86XE5 327 aa3.25□□□□□ -1.89
HTT-211ENST00000513326 VSTM2AQ8TAG5 236 aa3.25□□□□□ -1.89
HTT-211ENST00000513326 HINT2Q9BX68 163 aa3.25□□□□□ -1.89
HTT-211ENST00000513326 SLC35B3Q9H1N7 401 aa3.25□□□□□ -1.89
HTT-211ENST00000513326 PRELID3BQ9Y3B1 194 aa3.25□□□□□ -1.89
HTT-211ENST00000513326 AP4S1Q9Y587 144 aa3.25□□□□□ -1.89
HTT-211ENST00000513326 PUS1Q9Y606 427 aaKnown RBP eCLIP3.25□□□□□ -1.89
HTT-211ENST00000513326 RFNGQ9Y644 331 aa3.25□□□□□ -1.89
HTT-211ENST00000513326 A0A087WTM6 91 aa3.24□□□□□ -1.89
HTT-211ENST00000513326 PLAC8L1A1L4L8 177 aa3.24□□□□□ -1.89
HTT-211ENST00000513326 TMEM189A5PLL7 270 aa3.24□□□□□ -1.89
HTT-211ENST00000513326 HELTA6NFD8 242 aa3.24□□□□□ -1.89
HTT-211ENST00000513326 F5H768 121 aa3.24□□□□□ -1.89
HTT-211ENST00000513326 F6UB75 175 aa3.24□□□□□ -1.89
HTT-211ENST00000513326 MT-CO2P00403 227 aa3.24□□□□□ -1.89
HTT-211ENST00000513326 HLA-DQB1P01920 261 aa3.24□□□□□ -1.89
HTT-211ENST00000513326 CDK1P06493 297 aa3.24□□□□□ -1.89
HTT-211ENST00000513326 CFC1BP0CG36 223 aa3.24□□□□□ -1.89
HTT-211ENST00000513326 CFC1P0CG37 223 aa3.24□□□□□ -1.89
HTT-211ENST00000513326 TRAPPC2P0DI81 140 aa3.24□□□□□ -1.89
HTT-211ENST00000513326 TRAPPC2BP0DI82 140 aa3.24□□□□□ -1.89
HTT-211ENST00000513326 DEFB130BP0DP73 79 aa3.24□□□□□ -1.89
HTT-211ENST00000513326 DEFB130AP0DP74 79 aa3.24□□□□□ -1.89
HTT-211ENST00000513326 CD36P16671 472 aa3.24□□□□□ -1.89
HTT-211ENST00000513326 ASIPP42127 132 aa3.24□□□□□ -1.89
HTT-211ENST00000513326 PAX9P55771 341 aa3.24□□□□□ -1.89
HTT-211ENST00000513326 CCL18P55774 89 aa3.24□□□□□ -1.89
HTT-211ENST00000513326 DHRS2Q13268 280 aa3.24□□□□□ -1.89
HTT-211ENST00000513326 USF2Q15853 346 aaPredicted RBP3.24□□□□□ -1.89
HTT-211ENST00000513326 ESRGQ1W209 222 aa3.24□□□□□ -1.89
HTT-211ENST00000513326 C2orf76Q3KRA6 126 aa3.24□□□□□ -1.89
HTT-211ENST00000513326 ACSM3Q53FZ2 586 aa3.24□□□□□ -1.89
HTT-211ENST00000513326 DHRS11Q6UWP2 260 aa3.24□□□□□ -1.89
HTT-211ENST00000513326 TMPRSS11AQ6ZMR5 421 aa3.24□□□□□ -1.89
HTT-211ENST00000513326 COX8CQ7Z4L0 72 aa3.24□□□□□ -1.89
HTT-211ENST00000513326 SPAG16Q8N0X2 631 aa3.24□□□□□ -1.89
HTT-211ENST00000513326 DUSP18Q8NEJ0 188 aa3.24□□□□□ -1.89
HTT-211ENST00000513326 CENPNQ96H22 339 aaPredicted RBP3.24□□□□□ -1.89
HTT-211ENST00000513326 LITAFQ99732 161 aa3.24□□□□□ -1.89
HTT-211ENST00000513326 COMMD5Q9GZQ3 224 aa3.24□□□□□ -1.89
HTT-211ENST00000513326 SLC5A7Q9GZV3 580 aa3.24□□□□□ -1.89
HTT-211ENST00000513326 DCSTAMPQ9H295 470 aa3.24□□□□□ -1.89
HTT-211ENST00000513326 CCL28Q9NRJ3 127 aa3.24□□□□□ -1.89
HTT-211ENST00000513326 NDUFA4L2Q9NRX3 87 aa3.24□□□□□ -1.89
HTT-211ENST00000513326 THYN1Q9P016 225 aa3.24□□□□□ -1.89
HTT-211ENST00000513326 DIMT1Q9UNQ2 313 aaKnown RBP3.24□□□□□ -1.89
HTT-211ENST00000513326 AK6Q9Y3D8 172 aaKnown RBP3.24□□□□□ -1.89
HTT-211ENST00000513326 PYGO1Q9Y3Y4 419 aa3.24□□□□□ -1.89
HTT-211ENST00000513326 SNTNA6NMZ2 147 aa3.23□□□□□ -1.89
HTT-211ENST00000513326 ZNF705GA8MUZ8 300 aaPredicted RBP3.23□□□□□ -1.89
HTT-211ENST00000513326 SLC17A2O00624 439 aa3.23□□□□□ -1.89
HTT-211ENST00000513326 DIRAS3O95661 229 aa3.23□□□□□ -1.89
HTT-211ENST00000513326 HRASP01112 189 aa3.23□□□□□ -1.89
HTT-211ENST00000513326 EIF4EP06730 217 aaKnown RBP3.23□□□□□ -1.89
HTT-211ENST00000513326 P0C879 139 aa3.23□□□□□ -1.89
HTT-211ENST00000513326 HLA-DRB4P13762 266 aa3.23□□□□□ -1.89
HTT-211ENST00000513326 HIST1H1DP16402 221 aaKnown RBP3.23□□□□□ -1.89
HTT-211ENST00000513326 DCKP27707 260 aa3.23□□□□□ -1.89
HTT-211ENST00000513326 FGF9P31371 208 aaPredicted RBP3.23□□□□□ -1.89
HTT-211ENST00000513326 GNGT1P63211 74 aa3.23□□□□□ -1.89
HTT-211ENST00000513326 CLINT1Q14677 625 aa3.23□□□□□ -1.89
HTT-211ENST00000513326 POU2AF1Q16633 256 aa3.23□□□□□ -1.89
HTT-211ENST00000513326 SPINK9Q5DT21 86 aa3.23□□□□□ -1.89
HTT-211ENST00000513326 TTC32Q5I0X7 151 aa3.23□□□□□ -1.89
HTT-211ENST00000513326 ADAMTSL4-AS1Q5T5F5 129 aa3.23□□□□□ -1.89
HTT-211ENST00000513326 NOTCH2NLQ7Z3S9 236 aa3.23□□□□□ -1.89
HTT-211ENST00000513326 OR4D10Q8NGI6 311 aa3.23□□□□□ -1.89
HTT-211ENST00000513326 LSM10Q969L4 123 aaKnown RBP3.23□□□□□ -1.89
HTT-211ENST00000513326 PINX1Q96BK5 328 aaKnown RBP3.23□□□□□ -1.89
HTT-211ENST00000513326 FAM3DQ96BQ1 224 aa3.23□□□□□ -1.89
HTT-211ENST00000513326 RAB3CQ96E17 227 aa3.23□□□□□ -1.89
HTT-211ENST00000513326 MYCBPQ99417 103 aaPredicted RBP3.23□□□□□ -1.89
HTT-211ENST00000513326 ATP6V0BQ99437 205 aa3.23□□□□□ -1.89
HTT-211ENST00000513326 HSD17B10Q99714 261 aaKnown RBP3.23□□□□□ -1.89
HTT-211ENST00000513326 HLA-DRB4X5D2U9 266 aa3.23□□□□□ -1.89
HTT-211ENST00000513326 TNXBP22105 4242 aa3.23□□□□□ -1.89
HTT-211ENST00000513326 A0A087X0K7 114 aa3.22□□□□□ -1.89
HTT-211ENST00000513326 A0A0J9YY99 117 aa3.22□□□□□ -1.89
HTT-211ENST00000513326 TEX48A0A1B0GUV7 120 aa3.22□□□□□ -1.89
HTT-211ENST00000513326 LOC100130705A0A1B0GUX0 176 aa3.22□□□□□ -1.89
HTT-211ENST00000513326 SMIM30A4D0T7 59 aa3.22□□□□□ -1.89
HTT-211ENST00000513326 SMIM9A6NGZ8 99 aa3.22□□□□□ -1.89
HTT-211ENST00000513326 GYG2O15488 501 aa3.22□□□□□ -1.89
HTT-211ENST00000513326 ATP8B1O43520 1251 aa3.22□□□□□ -1.89
HTT-211ENST00000513326 DENRO43583 198 aaKnown RBP3.22□□□□□ -1.89
HTT-211ENST00000513326 SSX5O60225 188 aa3.22□□□□□ -1.89
HTT-211ENST00000513326 GNG7O60262 68 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms