RNA–Protein interactions for RNA: ENST00000513314.1

DHFR-207, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-207ENST00000513314 GADD45GO95257 159 aa0.71□□□□□ -2.3
DHFR-207ENST00000513314 DHFRP00374 187 aa0.71□□□□□ -2.3
DHFR-207ENST00000513314 ERP29P30040 261 aaKnown RBP0.71□□□□□ -2.3
DHFR-207ENST00000513314 DEFA3P59666 94 aa0.71□□□□□ -2.3
DHFR-207ENST00000513314 KRR1Q13601 381 aaKnown RBP0.71□□□□□ -2.3
DHFR-207ENST00000513314 TMEM97Q5BJF2 176 aa0.71□□□□□ -2.3
DHFR-207ENST00000513314 SLC30A7Q8NEW0 376 aa0.71□□□□□ -2.3
DHFR-207ENST00000513314 WFDC5Q8TCV5 224 aa0.71□□□□□ -2.3
DHFR-207ENST00000513314 GNPDA2Q8TDQ7 276 aa0.71□□□□□ -2.3
DHFR-207ENST00000513314 YPEL2Q96QA6 119 aa0.71□□□□□ -2.3
DHFR-207ENST00000513314 NMNAT1Q9HAN9 279 aaPredicted RBP0.71□□□□□ -2.3
DHFR-207ENST00000513314 CEP192Q8TEP8 1941 aa0.71□□□□□ -2.3
DHFR-207ENST00000513314 DOCK3Q8IZD9 2030 aa0.71□□□□□ -2.3
DHFR-207ENST00000513314 A0A1W2PPM0 123 aa0.7□□□□□ -2.3
DHFR-207ENST00000513314 SMIM9A6NGZ8 99 aa0.7□□□□□ -2.3
DHFR-207ENST00000513314 OR2T8A6NH00 312 aa0.7□□□□□ -2.3
DHFR-207ENST00000513314 CCL25O15444 150 aa0.7□□□□□ -2.3
DHFR-207ENST00000513314 MYL5Q02045 173 aa0.7□□□□□ -2.3
DHFR-207ENST00000513314 SRSF6Q13247 344 aaKnown RBP0.7□□□□□ -2.3
DHFR-207ENST00000513314 RGS21Q2M5E4 152 aa0.7□□□□□ -2.3
DHFR-207ENST00000513314 OR8J2Q8NGG1 315 aa0.7□□□□□ -2.3
DHFR-207ENST00000513314 TP53RKQ96S44 253 aa0.7□□□□□ -2.3
DHFR-207ENST00000513314 SIGMAR1Q99720 223 aa0.7□□□□□ -2.3
DHFR-207ENST00000513314 PARD6GQ9BYG4 376 aaPredicted RBP0.7□□□□□ -2.3
DHFR-207ENST00000513314 FBN2P35556 2912 aa0.7□□□□□ -2.3
DHFR-207ENST00000513314 ECM29Q5VYK3 1845 aa0.69□□□□□ -2.3
DHFR-207ENST00000513314 TAF1LQ8IZX4 1826 aa0.69□□□□□ -2.3
DHFR-207ENST00000513314 CCL16O15467 120 aa0.69□□□□□ -2.3
DHFR-207ENST00000513314 TIMM17BO60830 172 aa0.69□□□□□ -2.3
DHFR-207ENST00000513314 CDKN2CP42773 168 aa0.69□□□□□ -2.3
DHFR-207ENST00000513314 DYNLT1P63172 113 aa0.69□□□□□ -2.3
DHFR-207ENST00000513314 PSG9Q00887 426 aa0.69□□□□□ -2.3
DHFR-207ENST00000513314 BCL2L15Q5TBC7 163 aa0.69□□□□□ -2.3
DHFR-207ENST00000513314 SBSPONQ8IVN8 264 aa0.69□□□□□ -2.3
DHFR-207ENST00000513314 OR52L1Q8NGH7 329 aa0.69□□□□□ -2.3
DHFR-207ENST00000513314 ZNF431Q8TF32 576 aaPredicted RBP0.69□□□□□ -2.3
DHFR-207ENST00000513314 LINC00467Q9BRT7 94 aa0.69□□□□□ -2.3
DHFR-207ENST00000513314 UBAP1Q9NZ09 502 aa0.69□□□□□ -2.3
DHFR-207ENST00000513314 LY96Q9Y6Y9 160 aa0.69□□□□□ -2.3
DHFR-207ENST00000513314 STRCQ7RTU9 1775 aa0.69□□□□□ -2.3
DHFR-207ENST00000513314 ROBO3Q96MS0 1386 aa0.69□□□□□ -2.3
DHFR-207ENST00000513314 SCN10AQ9Y5Y9 1956 aa0.68□□□□□ -2.3
DHFR-207ENST00000513314 CST8O60676 142 aa0.68□□□□□ -2.3
DHFR-207ENST00000513314 KLF7O75840 302 aaPredicted RBP0.68□□□□□ -2.3
DHFR-207ENST00000513314 OR7C1O76099 320 aaPredicted RBP0.68□□□□□ -2.3
DHFR-207ENST00000513314 TCRBP04435 133 aa0.68□□□□□ -2.3
DHFR-207ENST00000513314 C12orf45Q8N5I9 185 aaPredicted RBP0.68□□□□□ -2.3
DHFR-207ENST00000513314 Q8N6K4 173 aa0.68□□□□□ -2.3
DHFR-207ENST00000513314 TAS2R7Q9NYW3 318 aa0.68□□□□□ -2.3
DHFR-207ENST00000513314 ORMDL1Q9P0S3 153 aa0.68□□□□□ -2.3
DHFR-207ENST00000513314 FAM32AQ9Y421 112 aaKnown RBP0.68□□□□□ -2.3
DHFR-207ENST00000513314 MYH10P35580 1976 aa0.67□□□□□ -2.3
DHFR-207ENST00000513314 IGLV3-32A0A0A0MS00 114 aa0.67□□□□□ -2.3
DHFR-207ENST00000513314 TLCD2A6NGC4 264 aa0.67□□□□□ -2.3
DHFR-207ENST00000513314 A8MWV9 139 aa0.67□□□□□ -2.3
DHFR-207ENST00000513314 TMEM114B3SHH9 223 aa0.67□□□□□ -2.3
DHFR-207ENST00000513314 LSM6P62312 80 aaKnown RBP0.67□□□□□ -2.3
DHFR-207ENST00000513314 RANP62826 216 aaKnown RBP0.67□□□□□ -2.3
DHFR-207ENST00000513314 AKIRIN2Q53H80 203 aa0.67□□□□□ -2.3
DHFR-207ENST00000513314 LINC00322Q6ZN03 302 aaPredicted RBP0.67□□□□□ -2.3
DHFR-207ENST00000513314 TEN1Q86WV5 123 aa0.67□□□□□ -2.3
DHFR-207ENST00000513314 PDZD9Q8IXQ8 264 aa0.67□□□□□ -2.3
DHFR-207ENST00000513314 CANT1Q8WVQ1 401 aa0.67□□□□□ -2.3
DHFR-207ENST00000513314 ADAT3Q96EY9 351 aaPredicted RBP0.67□□□□□ -2.3
DHFR-207ENST00000513314 SLC25A21Q9BQT8 299 aaPredicted RBP0.67□□□□□ -2.3
DHFR-207ENST00000513314 TMEM70Q9BUB7 260 aa0.67□□□□□ -2.3
DHFR-207ENST00000513314 IMUPQ9GZP8 106 aa0.67□□□□□ -2.3
DHFR-207ENST00000513314 TLNRD1Q9H1K6 362 aa0.67□□□□□ -2.3
DHFR-207ENST00000513314 TNFSF18Q9UNG2 199 aa0.67□□□□□ -2.3
DHFR-207ENST00000513314 ZNF106Q9H2Y7 1883 aaKnown RBP0.67□□□□□ -2.3
DHFR-207ENST00000513314 DENND4CQ5VZ89 1909 aa0.66□□□□□ -2.3
DHFR-207ENST00000513314 PLXND1Q9Y4D7 1925 aa0.66□□□□□ -2.3
DHFR-207ENST00000513314 IGHV1-58A0A0C4DH39 117 aa0.66□□□□□ -2.3
DHFR-207ENST00000513314 TRBV6-4A0A1B0GX49 114 aa0.66□□□□□ -2.3
DHFR-207ENST00000513314 NDUFB3O43676 98 aa0.66□□□□□ -2.3
DHFR-207ENST00000513314 PIGPP57054 158 aa0.66□□□□□ -2.3
DHFR-207ENST00000513314 RRN3P1Q2M238 152 aa0.66□□□□□ -2.3
DHFR-207ENST00000513314 LIN52Q52LA3 116 aa0.66□□□□□ -2.3
DHFR-207ENST00000513314 EIF5AL1Q6IS14 154 aaKnown RBP0.66□□□□□ -2.3
DHFR-207ENST00000513314 C4orf22Q6V702 233 aa0.66□□□□□ -2.3
DHFR-207ENST00000513314 RNF122Q9H9V4 155 aa0.66□□□□□ -2.3
DHFR-207ENST00000513314 IDI2-AS1Q9NZ38 188 aa0.66□□□□□ -2.3
DHFR-207ENST00000513314 SLC22A13Q9Y226 551 aa0.66□□□□□ -2.3
DHFR-207ENST00000513314 MED1Q15648 1581 aaPredicted RBP0.66□□□□□ -2.3
DHFR-207ENST00000513314 HEATR1Q9H583 2144 aaKnown RBP0.65□□□□□ -2.3
DHFR-207ENST00000513314 H3BRM9 83 aa0.65□□□□□ -2.31
DHFR-207ENST00000513314 NUPR1O60356 82 aa0.65□□□□□ -2.31
DHFR-207ENST00000513314 IFNA7P01567 189 aa0.65□□□□□ -2.31
DHFR-207ENST00000513314 CD2P06729 351 aa0.65□□□□□ -2.31
DHFR-207ENST00000513314 MYL6P60660 151 aa0.65□□□□□ -2.31
DHFR-207ENST00000513314 OR11H6Q8NGC7 330 aa0.65□□□□□ -2.31
DHFR-207ENST00000513314 STAG3L4Q8TBR4 150 aa0.65□□□□□ -2.31
DHFR-207ENST00000513314 ENY2Q9NPA8 101 aa0.65□□□□□ -2.31
DHFR-207ENST00000513314 TMEM138Q9NPI0 162 aa0.65□□□□□ -2.31
DHFR-207ENST00000513314 ARL2BPQ9Y2Y0 163 aa0.65□□□□□ -2.31
DHFR-207ENST00000513314 NEO1Q92859 1461 aa0.65□□□□□ -2.31
DHFR-207ENST00000513314 SCN8AQ9UQD0 1980 aa0.65□□□□□ -2.31
DHFR-207ENST00000513314 LAMA4Q16363 1823 aa0.64□□□□□ -2.31
DHFR-207ENST00000513314 ASCC3Q8N3C0 2202 aaKnown RBP0.64□□□□□ -2.31
DHFR-207ENST00000513314 TRAV10A0A0B4J240 114 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms