RNA–Protein interactions for RNA: ENST00000512726.1

RFC1-214, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-214ENST00000512726 TMEM106BQ9NUM4 274 aa3.36□□□□□ -1.87
RFC1-214ENST00000512726 MED11Q9P086 117 aa3.36□□□□□ -1.87
RFC1-214ENST00000512726 PIAS1O75925 651 aa3.35□□□□□ -1.87
RFC1-214ENST00000512726 IFNA14P01570 189 aa3.35□□□□□ -1.87
RFC1-214ENST00000512726 SPANXN5Q5MJ07 72 aa3.35□□□□□ -1.87
RFC1-214ENST00000512726 OR10J5Q8NHC4 309 aa3.35□□□□□ -1.87
RFC1-214ENST00000512726 RNASE11Q8TAA1 199 aaKnown RBP3.35□□□□□ -1.87
RFC1-214ENST00000512726 TAS2R4Q9NYW5 299 aa3.35□□□□□ -1.87
RFC1-214ENST00000512726 LAMTOR3Q9UHA4 124 aa3.35□□□□□ -1.87
RFC1-214ENST00000512726 LHFPL6Q9Y693 200 aa3.35□□□□□ -1.87
RFC1-214ENST00000512726 RTTNQ86VV8 2226 aa3.35□□□□□ -1.87
RFC1-214ENST00000512726 STRCP1A6NGW2 1772 aa3.34□□□□□ -1.87
RFC1-214ENST00000512726 FUOMA2VDF0 154 aa3.34□□□□□ -1.87
RFC1-214ENST00000512726 TMEM256-PLSCR3K7ERE1 68 aa3.34□□□□□ -1.87
RFC1-214ENST00000512726 FKBP2P26885 142 aaKnown RBP3.34□□□□□ -1.87
RFC1-214ENST00000512726 ELOBQ15370 118 aa3.34□□□□□ -1.87
RFC1-214ENST00000512726 LTC4SQ16873 150 aa3.34□□□□□ -1.87
RFC1-214ENST00000512726 LCE3AQ5TA76 89 aa3.34□□□□□ -1.87
RFC1-214ENST00000512726 CROCCP2Q86T23 111 aa3.34□□□□□ -1.87
RFC1-214ENST00000512726 IFT20Q8IY31 132 aa3.34□□□□□ -1.87
RFC1-214ENST00000512726 PRADC1Q9BSG0 188 aa3.34□□□□□ -1.87
RFC1-214ENST00000512726 COL5A1P20908 1838 aaPredicted RBP3.34□□□□□ -1.87
RFC1-214ENST00000512726 IGKV1D-42A0A075B6H8 117 aa3.33□□□□□ -1.88
RFC1-214ENST00000512726 PCNX2A6NKB5 2137 aa3.33□□□□□ -1.88
RFC1-214ENST00000512726 TSTD3H0UI37 97 aa3.33□□□□□ -1.88
RFC1-214ENST00000512726 UBBP0CG47 229 aa3.33□□□□□ -1.88
RFC1-214ENST00000512726 C9orf163Q8N9P6 203 aa3.33□□□□□ -1.88
RFC1-214ENST00000512726 TEX37Q96LM6 180 aa3.33□□□□□ -1.88
RFC1-214ENST00000512726 MRPL32Q9BYC8 188 aaKnown RBP3.33□□□□□ -1.88
RFC1-214ENST00000512726 TMEM126AQ9H061 195 aa3.33□□□□□ -1.88
RFC1-214ENST00000512726 NDUFAF1Q9Y375 327 aa3.33□□□□□ -1.88
RFC1-214ENST00000512726 DISP1Q96F81 1524 aa3.33□□□□□ -1.88
RFC1-214ENST00000512726 E7EQ34 232 aa3.32□□□□□ -1.88
RFC1-214ENST00000512726 NDUFB3O43676 98 aa3.32□□□□□ -1.88
RFC1-214ENST00000512726 TRGC2P03986 189 aa3.32□□□□□ -1.88
RFC1-214ENST00000512726 KRTAP10-1P60331 282 aa3.32□□□□□ -1.88
RFC1-214ENST00000512726 BRMS1LQ5PSV4 323 aa3.32□□□□□ -1.88
RFC1-214ENST00000512726 ZCCHC13Q8WW36 166 aaKnown RBP3.32□□□□□ -1.88
RFC1-214ENST00000512726 MBD3L1Q8WWY6 194 aa3.32□□□□□ -1.88
RFC1-214ENST00000512726 GPX7Q96SL4 187 aaPredicted RBP3.32□□□□□ -1.88
RFC1-214ENST00000512726 RTL8AQ9BWD3 113 aa3.32□□□□□ -1.88
RFC1-214ENST00000512726 RIMBP3CA6NJZ7 1639 aa3.32□□□□□ -1.88
RFC1-214ENST00000512726 RIMBP3BA6NNM3 1639 aa3.32□□□□□ -1.88
RFC1-214ENST00000512726 RIMBP3Q9UFD9 1639 aa3.32□□□□□ -1.88
RFC1-214ENST00000512726 FN1P02751 2386 aaKnown RBP3.31□□□□□ -1.88
RFC1-214ENST00000512726 SBF1O95248 1867 aa3.31□□□□□ -1.88
RFC1-214ENST00000512726 OR2T1O43869 369 aa3.31□□□□□ -1.88
RFC1-214ENST00000512726 DYNLT1P63172 113 aa3.31□□□□□ -1.88
RFC1-214ENST00000512726 MYL5Q02045 173 aa3.31□□□□□ -1.88
RFC1-214ENST00000512726 PDZD9Q8IXQ8 264 aa3.31□□□□□ -1.88
RFC1-214ENST00000512726 SLC30A7Q8NEW0 376 aa3.31□□□□□ -1.88
RFC1-214ENST00000512726 PPTC7Q8NI37 304 aa3.31□□□□□ -1.88
RFC1-214ENST00000512726 TEX47Q8TBZ9 253 aa3.31□□□□□ -1.88
RFC1-214ENST00000512726 CCDC32Q9BV29 185 aa3.31□□□□□ -1.88
RFC1-214ENST00000512726 BAHCC1Q9P281 2608 aa3.31□□□□□ -1.88
RFC1-214ENST00000512726 EML6Q6ZMW3 1958 aa3.31□□□□□ -1.88
RFC1-214ENST00000512726 NUP210LQ5VU65 1888 aa3.3□□□□□ -1.88
RFC1-214ENST00000512726 ARHGEF28Q8N1W1 1705 aaKnown RBP3.3□□□□□ -1.88
RFC1-214ENST00000512726 ZCCHC11Q5TAX3 1644 aaKnown RBP3.3□□□□□ -1.88
RFC1-214ENST00000512726 A0A1W2PRE2 83 aa3.3□□□□□ -1.88
RFC1-214ENST00000512726 TLCD2A6NGC4 264 aa3.3□□□□□ -1.88
RFC1-214ENST00000512726 S100GP29377 79 aa3.3□□□□□ -1.88
RFC1-214ENST00000512726 INSL3P51460 131 aa3.3□□□□□ -1.88
RFC1-214ENST00000512726 DYNLT3P51808 116 aa3.3□□□□□ -1.88
RFC1-214ENST00000512726 SLC50A1Q9BRV3 221 aa3.3□□□□□ -1.88
RFC1-214ENST00000512726 BCL2L10Q9HD36 194 aa3.3□□□□□ -1.88
RFC1-214ENST00000512726 OR52A1Q9UKL2 312 aa3.3□□□□□ -1.88
RFC1-214ENST00000512726 STRCQ7RTU9 1775 aa3.3□□□□□ -1.88
RFC1-214ENST00000512726 SCN8AQ9UQD0 1980 aa3.29□□□□□ -1.88
RFC1-214ENST00000512726 BAALC-AS2P0C853 105 aa3.29□□□□□ -1.88
RFC1-214ENST00000512726 AKR1C3P42330 323 aa3.29□□□□□ -1.88
RFC1-214ENST00000512726 RHOGP84095 191 aa3.29□□□□□ -1.88
RFC1-214ENST00000512726 SOSTDC1Q6X4U4 206 aa3.29□□□□□ -1.88
RFC1-214ENST00000512726 GRPEL2Q8TAA5 225 aa3.29□□□□□ -1.88
RFC1-214ENST00000512726 PYDC1Q8WXC3 89 aa3.29□□□□□ -1.88
RFC1-214ENST00000512726 GLI3P10071 1580 aa3.29□□□□□ -1.88
RFC1-214ENST00000512726 CAMSAP2Q08AD1 1489 aa3.28□□□□□ -1.88
RFC1-214ENST00000512726 RP1P56715 2156 aa3.28□□□□□ -1.88
RFC1-214ENST00000512726 Q1T7F1 81 aa3.28□□□□□ -1.88
RFC1-214ENST00000512726 FKBP1CQ5VVH2 108 aa3.28□□□□□ -1.88
RFC1-214ENST00000512726 PHF13Q86YI8 300 aaPredicted RBP3.28□□□□□ -1.88
RFC1-214ENST00000512726 SLC25A21Q9BQT8 299 aaPredicted RBP3.28□□□□□ -1.88
RFC1-214ENST00000512726 NPCDR1Q9BY65 106 aa3.28□□□□□ -1.88
RFC1-214ENST00000512726 BRWD1Q9NSI6 2320 aa3.27□□□□□ -1.89
RFC1-214ENST00000512726 TRAV1-1A0A0B4J248 108 aa3.27□□□□□ -1.89
RFC1-214ENST00000512726 F8W036 122 aa3.27□□□□□ -1.89
RFC1-214ENST00000512726 MGST1P10620 155 aaKnown RBP3.27□□□□□ -1.89
RFC1-214ENST00000512726 MIFP14174 115 aa3.27□□□□□ -1.89
RFC1-214ENST00000512726 GPX2P18283 190 aa3.27□□□□□ -1.89
RFC1-214ENST00000512726 ZNF846Q147U1 533 aa3.27□□□□□ -1.89
RFC1-214ENST00000512726 RTL8BQ17RB0 113 aa3.27□□□□□ -1.89
RFC1-214ENST00000512726 ESRGQ1W209 222 aa3.27□□□□□ -1.89
RFC1-214ENST00000512726 TMEM128Q5BJH2 165 aa3.27□□□□□ -1.89
RFC1-214ENST00000512726 EIF5AL1Q6IS14 154 aaKnown RBP3.27□□□□□ -1.89
RFC1-214ENST00000512726 TOMM20LQ6UXN7 152 aa3.27□□□□□ -1.89
RFC1-214ENST00000512726 C3orf56Q8N813 242 aa3.27□□□□□ -1.89
RFC1-214ENST00000512726 SKA2Q8WVK7 121 aaPredicted RBP3.27□□□□□ -1.89
RFC1-214ENST00000512726 RMND5BQ96G75 393 aaPredicted RBP3.27□□□□□ -1.89
RFC1-214ENST00000512726 LINC00467Q9BRT7 94 aa3.27□□□□□ -1.89
RFC1-214ENST00000512726 EFCAB11Q9BUY7 163 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms