RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 ZNF355PQ9NSJ1 428 aa11.88□□□□□ -0.51
SCLT1-209ENST00000511426 UNC79Q9P2D8 2635 aa11.88□□□□□ -0.51
SCLT1-209ENST00000511426 SH2D7A6NKC9 451 aaPredicted RBP11.87□□□□□ -0.51
SCLT1-209ENST00000511426 F8W735 103 aaPredicted RBP11.87□□□□□ -0.51
SCLT1-209ENST00000511426 GCHFRP30047 84 aa11.87□□□□□ -0.51
SCLT1-209ENST00000511426 CFHR3Q02985 330 aa11.87□□□□□ -0.51
SCLT1-209ENST00000511426 TIGITQ495A1 244 aa11.87□□□□□ -0.51
SCLT1-209ENST00000511426 A0A0G2JLM5 398 aa11.87□□□□□ -0.51
SCLT1-209ENST00000511426 HMGB3O15347 200 aaKnown RBP11.87□□□□□ -0.51
SCLT1-209ENST00000511426 PDE6DO43924 150 aa11.87□□□□□ -0.51
SCLT1-209ENST00000511426 IGLV1-40P01703 118 aa11.87□□□□□ -0.51
SCLT1-209ENST00000511426 SRP19P09132 144 aaKnown RBP11.87□□□□□ -0.51
SCLT1-209ENST00000511426 RPL15P61313 204 aaKnown RBP11.87□□□□□ -0.51
SCLT1-209ENST00000511426 ATP5G2Q06055 141 aa11.87□□□□□ -0.51
SCLT1-209ENST00000511426 MIR17HGQ75NE6 70 aa11.87□□□□□ -0.51
SCLT1-209ENST00000511426 LINC00305Q7Z4B0 112 aa11.87□□□□□ -0.51
SCLT1-209ENST00000511426 IQCF2Q8IXL9 164 aa11.87□□□□□ -0.51
SCLT1-209ENST00000511426 OR1B1Q8NGR6 318 aa11.87□□□□□ -0.51
SCLT1-209ENST00000511426 RARRES2Q99969 163 aa11.87□□□□□ -0.51
SCLT1-209ENST00000511426 NKX6-2Q9C056 277 aaPredicted RBP11.87□□□□□ -0.51
SCLT1-209ENST00000511426 YAE1D1Q9NRH1 226 aa11.87□□□□□ -0.51
SCLT1-209ENST00000511426 HIGD1AQ9Y241 93 aa11.87□□□□□ -0.51
SCLT1-209ENST00000511426 WI2-2373I1.2A0A1W2PRP0 233 aa11.86□□□□□ -0.51
SCLT1-209ENST00000511426 ADCYAP1P18509 176 aa11.86□□□□□ -0.51
SCLT1-209ENST00000511426 ORM2P19652 201 aa11.86□□□□□ -0.51
SCLT1-209ENST00000511426 SOHLH1Q5JUK2 328 aa11.86□□□□□ -0.51
SCLT1-209ENST00000511426 PATE2Q6UY27 113 aa11.86□□□□□ -0.51
SCLT1-209ENST00000511426 ZNF600Q6ZNG1 722 aa11.86□□□□□ -0.51
SCLT1-209ENST00000511426 Q8N2B8 174 aa11.86□□□□□ -0.51
SCLT1-209ENST00000511426 RXFP4Q8TDU9 374 aa11.86□□□□□ -0.51
SCLT1-209ENST00000511426 RNF125Q96EQ8 232 aa11.86□□□□□ -0.51
SCLT1-209ENST00000511426 MRPL27Q9P0M9 148 aaKnown RBP11.86□□□□□ -0.51
SCLT1-209ENST00000511426 PDZD2O15018 2839 aa11.86□□□□□ -0.51
SCLT1-209ENST00000511426 VPS13CQ709C8 3753 aa11.85□□□□□ -0.51
SCLT1-209ENST00000511426 C9JQL5 133 aa11.85□□□□□ -0.51
SCLT1-209ENST00000511426 CLDN34H7C241 214 aa11.85□□□□□ -0.51
SCLT1-209ENST00000511426 OR7C2O60412 319 aa11.85□□□□□ -0.51
SCLT1-209ENST00000511426 IGHG4P01861 327 aa11.85□□□□□ -0.51
SCLT1-209ENST00000511426 APOC3P02656 99 aa11.85□□□□□ -0.51
SCLT1-209ENST00000511426 CTSGP08311 255 aa11.85□□□□□ -0.51
SCLT1-209ENST00000511426 SIGLECL1Q8N7X8 197 aa11.85□□□□□ -0.51
SCLT1-209ENST00000511426 ZNF491Q8N8L2 437 aa11.85□□□□□ -0.51
SCLT1-209ENST00000511426 FAM167A-AS1Q96KT0 104 aa11.85□□□□□ -0.51
SCLT1-209ENST00000511426 ABCA1O95477 2261 aa11.85□□□□□ -0.51
SCLT1-209ENST00000511426 F6UZH7 168 aa11.84□□□□□ -0.51
SCLT1-209ENST00000511426 SNAPINO95295 136 aa11.84□□□□□ -0.51
SCLT1-209ENST00000511426 TRGV3P03979 118 aa11.84□□□□□ -0.51
SCLT1-209ENST00000511426 FOSL1P15407 271 aa11.84□□□□□ -0.51
SCLT1-209ENST00000511426 LYZP61626 148 aa11.84□□□□□ -0.51
SCLT1-209ENST00000511426 SLC35B1P78383 322 aa11.84□□□□□ -0.51
SCLT1-209ENST00000511426 RELQ04864 619 aaPredicted RBP11.84□□□□□ -0.51
SCLT1-209ENST00000511426 SPATA31B1PQ5VZV4 182 aa11.84□□□□□ -0.51
SCLT1-209ENST00000511426 TCEAL7Q9BRU2 100 aa11.84□□□□□ -0.51
SCLT1-209ENST00000511426 TMPRSS5Q9H3S3 457 aa11.84□□□□□ -0.51
SCLT1-209ENST00000511426 GCN1Q92616 2671 aaKnown RBP11.84□□□□□ -0.51
SCLT1-209ENST00000511426 A0A1W2PRE2 83 aa11.84□□□□□ -0.51
SCLT1-209ENST00000511426 TGOLN2O43493 480 aa11.84□□□□□ -0.51
SCLT1-209ENST00000511426 PAGE4O60829 102 aa11.84□□□□□ -0.51
SCLT1-209ENST00000511426 RAB9AP51151 201 aa11.84□□□□□ -0.51
SCLT1-209ENST00000511426 TPPP2P59282 170 aa11.84□□□□□ -0.51
SCLT1-209ENST00000511426 FAM74A3Q4VXF1 159 aa11.84□□□□□ -0.51
SCLT1-209ENST00000511426 OR5AU1Q8NGC0 362 aa11.84□□□□□ -0.51
SCLT1-209ENST00000511426 SLC25A2Q9BXI2 301 aa11.84□□□□□ -0.51
SCLT1-209ENST00000511426 OR51M1Q9H341 326 aa11.84□□□□□ -0.51
SCLT1-209ENST00000511426 GSX1Q9H4S2 264 aaPredicted RBP11.84□□□□□ -0.51
SCLT1-209ENST00000511426 TMEM14CQ9P0S9 112 aa11.84□□□□□ -0.51
SCLT1-209ENST00000511426 DOK5Q9P104 306 aa11.84□□□□□ -0.51
SCLT1-209ENST00000511426 CDC42EP3Q9UKI2 254 aa11.84□□□□□ -0.51
SCLT1-209ENST00000511426 OR2T8A6NH00 312 aa11.83□□□□□ -0.52
SCLT1-209ENST00000511426 C11orf94C9JXX5 98 aa11.83□□□□□ -0.52
SCLT1-209ENST00000511426 BMPR1BO00238 502 aa11.83□□□□□ -0.52
SCLT1-209ENST00000511426 IL4P05112 153 aa11.83□□□□□ -0.52
SCLT1-209ENST00000511426 CD81P60033 236 aa11.83□□□□□ -0.52
SCLT1-209ENST00000511426 CCDC140Q96MF4 163 aa11.83□□□□□ -0.52
SCLT1-209ENST00000511426 PAXXQ9BUH6 204 aa11.83□□□□□ -0.52
SCLT1-209ENST00000511426 SLC25A39Q9BZJ4 359 aaPredicted RBP11.83□□□□□ -0.52
SCLT1-209ENST00000511426 H3BRN7 92 aa11.82□□□□□ -0.52
SCLT1-209ENST00000511426 GPR183P32249 361 aa11.82□□□□□ -0.52
SCLT1-209ENST00000511426 UBE2L3P68036 154 aaKnown RBP11.82□□□□□ -0.52
SCLT1-209ENST00000511426 DEFA5Q01523 94 aa11.82□□□□□ -0.52
SCLT1-209ENST00000511426 CYB561D1Q8N8Q1 229 aa11.82□□□□□ -0.52
SCLT1-209ENST00000511426 ZNF503Q96F45 646 aa11.82□□□□□ -0.52
SCLT1-209ENST00000511426 NOL4LQ96MY1 436 aaPredicted RBP11.82□□□□□ -0.52
SCLT1-209ENST00000511426 UHRF2Q96PU4 802 aa11.82□□□□□ -0.52
SCLT1-209ENST00000511426 SHANK2-AS3Q9BTD1 123 aa11.82□□□□□ -0.52
SCLT1-209ENST00000511426 ZNF702PQ9H963 129 aa11.82□□□□□ -0.52
SCLT1-209ENST00000511426 FAM74A7A6NL05 159 aa11.81□□□□□ -0.52
SCLT1-209ENST00000511426 CLEC3BP05452 202 aa11.81□□□□□ -0.52
SCLT1-209ENST00000511426 ELANEP08246 267 aa11.81□□□□□ -0.52
SCLT1-209ENST00000511426 PSMB8P28062 276 aa11.81□□□□□ -0.52
SCLT1-209ENST00000511426 ADMP35318 185 aa11.81□□□□□ -0.52
SCLT1-209ENST00000511426 PNRC1Q12796 327 aaPredicted RBP11.81□□□□□ -0.52
SCLT1-209ENST00000511426 Q6ZS46 218 aa11.81□□□□□ -0.52
SCLT1-209ENST00000511426 MS4A10Q96PG2 267 aa11.81□□□□□ -0.52
SCLT1-209ENST00000511426 NIPSNAP3BQ9BS92 247 aa11.81□□□□□ -0.52
SCLT1-209ENST00000511426 EIF3GO75821 320 aaKnown RBP eCLIP11.81□□□□□ -0.52
SCLT1-209ENST00000511426 PF4V1P10720 104 aa11.81□□□□□ -0.52
SCLT1-209ENST00000511426 FOXE3Q13461 319 aa11.81□□□□□ -0.52
SCLT1-209ENST00000511426 CST9LP1Q5W188 147 aa11.81□□□□□ -0.52
SCLT1-209ENST00000511426 TEX38Q6PEX7 206 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms