RNA–Protein interactions for RNA: ENST00000511125.1

SMAD1-209, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 3,293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-209ENST00000511125 A0A1W2PPV4 95 aa6.22□□□□□ -1.41
SMAD1-209ENST00000511125 COX7A2P2O60397 106 aa6.22□□□□□ -1.41
SMAD1-209ENST00000511125 TSPAN15O95858 294 aa6.22□□□□□ -1.41
SMAD1-209ENST00000511125 IFNA7P01567 189 aa6.22□□□□□ -1.41
SMAD1-209ENST00000511125 APOHP02749 345 aaPredicted RBP6.22□□□□□ -1.41
SMAD1-209ENST00000511125 SPP1P10451 314 aa6.22□□□□□ -1.41
SMAD1-209ENST00000511125 CEBPGP53567 150 aa6.22□□□□□ -1.41
SMAD1-209ENST00000511125 UBE2G2P60604 165 aa6.22□□□□□ -1.41
SMAD1-209ENST00000511125 RPL11P62913 178 aaKnown RBP6.22□□□□□ -1.41
SMAD1-209ENST00000511125 CCL20P78556 96 aa6.22□□□□□ -1.41
SMAD1-209ENST00000511125 KRTAP24-1Q3LI83 254 aa6.22□□□□□ -1.41
SMAD1-209ENST00000511125 RPP25LQ8N5L8 163 aaKnown RBP6.22□□□□□ -1.41
SMAD1-209ENST00000511125 STOML3Q8TAV4 291 aa6.22□□□□□ -1.41
SMAD1-209ENST00000511125 GATAD1Q8WUU5 269 aa6.22□□□□□ -1.41
SMAD1-209ENST00000511125 TMEM37Q8WXS4 190 aa6.22□□□□□ -1.41
SMAD1-209ENST00000511125 LSM4Q9Y4Z0 139 aaKnown RBP6.22□□□□□ -1.41
SMAD1-209ENST00000511125 C17orf112F2Z3M2 114 aa6.22□□□□□ -1.41
SMAD1-209ENST00000511125 INS-IGF2F8WCM5 200 aa6.22□□□□□ -1.41
SMAD1-209ENST00000511125 TSPAN9O75954 239 aa6.22□□□□□ -1.41
SMAD1-209ENST00000511125 CFHR3Q02985 330 aa6.22□□□□□ -1.41
SMAD1-209ENST00000511125 USF2Q15853 346 aaPredicted RBP6.22□□□□□ -1.41
SMAD1-209ENST00000511125 TM4SF20Q53R12 229 aa6.22□□□□□ -1.41
SMAD1-209ENST00000511125 TMEM116Q8NCL8 245 aa6.22□□□□□ -1.41
SMAD1-209ENST00000511125 GON7Q9BXV9 100 aa6.22□□□□□ -1.41
SMAD1-209ENST00000511125 SLC45A2Q9UMX9 530 aa6.22□□□□□ -1.41
SMAD1-209ENST00000511125 IGFL4Q6B9Z1 124 aa6.21□□□□□ -1.41
SMAD1-209ENST00000511125 TOMM20LQ6UXN7 152 aa6.21□□□□□ -1.41
SMAD1-209ENST00000511125 ZNF491Q8N8L2 437 aa6.21□□□□□ -1.41
SMAD1-209ENST00000511125 OR4F5Q8NH21 305 aa6.21□□□□□ -1.41
SMAD1-209ENST00000511125 BLNKQ8WV28 456 aa6.21□□□□□ -1.41
SMAD1-209ENST00000511125 CITED4Q96RK1 184 aa6.21□□□□□ -1.41
SMAD1-209ENST00000511125 SRSF8Q9BRL6 282 aaKnown RBP6.21□□□□□ -1.41
SMAD1-209ENST00000511125 SCRT1Q9BWW7 348 aa6.21□□□□□ -1.41
SMAD1-209ENST00000511125 ARV1Q9H2C2 271 aa6.21□□□□□ -1.41
SMAD1-209ENST00000511125 CLPSL1A2RUU4 121 aa6.21□□□□□ -1.42
SMAD1-209ENST00000511125 CLDN34H7C241 214 aa6.21□□□□□ -1.42
SMAD1-209ENST00000511125 TGOLN2O43493 480 aa6.21□□□□□ -1.42
SMAD1-209ENST00000511125 OR7C2O60412 319 aa6.21□□□□□ -1.42
SMAD1-209ENST00000511125 PYYP10082 97 aa6.21□□□□□ -1.42
SMAD1-209ENST00000511125 HIST1H1BP16401 226 aaKnown RBP6.21□□□□□ -1.42
SMAD1-209ENST00000511125 RAB14P61106 215 aa6.21□□□□□ -1.42
SMAD1-209ENST00000511125 ZNF726P1Q15940 193 aa6.21□□□□□ -1.42
SMAD1-209ENST00000511125 RPEL1Q2QD12 228 aa6.21□□□□□ -1.42
SMAD1-209ENST00000511125 PATE2Q6UY27 113 aa6.21□□□□□ -1.42
SMAD1-209ENST00000511125 LINC00305Q7Z4B0 112 aa6.21□□□□□ -1.42
SMAD1-209ENST00000511125 OR1L6Q8NGR2 347 aa6.21□□□□□ -1.42
SMAD1-209ENST00000511125 Q8WTZ3 238 aa6.21□□□□□ -1.42
SMAD1-209ENST00000511125 DPF1Q92782 380 aa6.21□□□□□ -1.42
SMAD1-209ENST00000511125 GNPNAT1Q96EK6 184 aaPredicted RBP6.21□□□□□ -1.42
SMAD1-209ENST00000511125 SLA2Q9H6Q3 261 aa6.21□□□□□ -1.42
SMAD1-209ENST00000511125 BMPR1BO00238 502 aa6.21□□□□□ -1.42
SMAD1-209ENST00000511125 TFPI2P48307 235 aa6.21□□□□□ -1.42
SMAD1-209ENST00000511125 EIF5AP63241 154 aaKnown RBP6.21□□□□□ -1.42
SMAD1-209ENST00000511125 VWC2Q2TAL6 325 aa6.21□□□□□ -1.42
SMAD1-209ENST00000511125 PXDC1Q5TGL8 231 aa6.21□□□□□ -1.42
SMAD1-209ENST00000511125 WFDC3Q8IUB2 231 aa6.21□□□□□ -1.42
SMAD1-209ENST00000511125 RAB24Q969Q5 203 aa6.21□□□□□ -1.42
SMAD1-209ENST00000511125 PEF1Q9UBV8 284 aaKnown RBP6.21□□□□□ -1.42
SMAD1-209ENST00000511125 A0A0G2JLM5 398 aa6.2□□□□□ -1.42
SMAD1-209ENST00000511125 LY86O95711 162 aa6.2□□□□□ -1.42
SMAD1-209ENST00000511125 HAGHQ16775 308 aa6.2□□□□□ -1.42
SMAD1-209ENST00000511125 C10orf113Q5VZT2 155 aa6.2□□□□□ -1.42
SMAD1-209ENST00000511125 GBGT1Q8N5D6 347 aa6.2□□□□□ -1.42
SMAD1-209ENST00000511125 RNF125Q96EQ8 232 aa6.2□□□□□ -1.42
SMAD1-209ENST00000511125 TMEM68Q96MH6 324 aa6.2□□□□□ -1.42
SMAD1-209ENST00000511125 GGACTQ9BVM4 153 aa6.2□□□□□ -1.42
SMAD1-209ENST00000511125 H2AFB1P0C5Y9 115 aa6.2□□□□□ -1.42
SMAD1-209ENST00000511125 RNF141Q8WVD5 230 aa6.2□□□□□ -1.42
SMAD1-209ENST00000511125 FAM223BA6NKX1 122 aa6.19□□□□□ -1.42
SMAD1-209ENST00000511125 HYPMO75409 117 aa6.19□□□□□ -1.42
SMAD1-209ENST00000511125 SEC11BP0C7V7 166 aa6.19□□□□□ -1.42
SMAD1-209ENST00000511125 M6PRP20645 277 aa6.19□□□□□ -1.42
SMAD1-209ENST00000511125 HOXD3P31249 432 aaPredicted RBP6.19□□□□□ -1.42
SMAD1-209ENST00000511125 ACOT6Q3I5F7 207 aaPredicted RBP6.19□□□□□ -1.42
SMAD1-209ENST00000511125 EIF5AL1Q6IS14 154 aaKnown RBP6.19□□□□□ -1.42
SMAD1-209ENST00000511125 FAM223AQ8IWN6 122 aa6.19□□□□□ -1.42
SMAD1-209ENST00000511125 Q8N2B8 174 aa6.19□□□□□ -1.42
SMAD1-209ENST00000511125 SPATA3Q8NHX4 192 aa6.19□□□□□ -1.42
SMAD1-209ENST00000511125 DNAJC4Q9NNZ3 241 aa6.19□□□□□ -1.42
SMAD1-209ENST00000511125 GNG13Q9P2W3 67 aa6.19□□□□□ -1.42
SMAD1-209ENST00000511125 RPH3ALQ9UNE2 315 aa6.19□□□□□ -1.42
SMAD1-209ENST00000511125 TRBV7-1A0A0A6YYK4 115 aa6.19□□□□□ -1.42
SMAD1-209ENST00000511125 ELANEP08246 267 aa6.19□□□□□ -1.42
SMAD1-209ENST00000511125 NMBP08949 121 aa6.19□□□□□ -1.42
SMAD1-209ENST00000511125 CDC34P49427 236 aaPredicted RBP6.19□□□□□ -1.42
SMAD1-209ENST00000511125 PROK1P58294 105 aa6.19□□□□□ -1.42
SMAD1-209ENST00000511125 PRR20EP86478 221 aa6.19□□□□□ -1.42
SMAD1-209ENST00000511125 PRR20CP86479 221 aa6.19□□□□□ -1.42
SMAD1-209ENST00000511125 PRR20DP86480 221 aa6.19□□□□□ -1.42
SMAD1-209ENST00000511125 PRR20BP86481 221 aa6.19□□□□□ -1.42
SMAD1-209ENST00000511125 PRR20AP86496 221 aa6.19□□□□□ -1.42
SMAD1-209ENST00000511125 FOXE3Q13461 319 aa6.19□□□□□ -1.42
SMAD1-209ENST00000511125 VN1R17PQ8TDU5 208 aa6.19□□□□□ -1.42
SMAD1-209ENST00000511125 C17orf77Q96MU5 243 aa6.19□□□□□ -1.42
SMAD1-209ENST00000511125 C19orf24Q9BVV8 132 aa6.19□□□□□ -1.42
SMAD1-209ENST00000511125 MAP1LC3B2A6NCE7 125 aa6.19□□□□□ -1.42
SMAD1-209ENST00000511125 ARL14EPLP0DKL9 152 aa6.19□□□□□ -1.42
SMAD1-209ENST00000511125 RPL29P47914 159 aaKnown RBP6.19□□□□□ -1.42
SMAD1-209ENST00000511125 ATP5IP56385 69 aaPredicted RBP6.19□□□□□ -1.42
SMAD1-209ENST00000511125 SRSF3P84103 164 aaKnown RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms