RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 TRAV34A0A0B4J273 112 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 A0A0J9YWU9 116 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 C3orf85A0A1B0GTC6 90 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 TMEM272A0A1B0GTI8 110 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 C16orf90A8MZG2 172 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 ZNF688P0C7X2 276 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 IGFBP3P17936 291 aaPredicted RBP2.16□□□□□ -2.06
CLOCK-209ENST00000511124 CFHR3Q02985 330 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 OR2F1Q13607 317 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 NEDD8Q15843 81 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 WDR73Q6P4I2 378 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 ZNF880Q6PDB4 577 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 FAM159AQ6UWV7 190 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 C5orf24Q7Z6I8 188 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 SBSPONQ8IVN8 264 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 FGFRL1Q8N441 504 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 ZNF383Q8NA42 475 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 TMEM229BQ8NBD8 167 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 GLYATL2Q8WU03 294 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 IGF2BP2-AS1Q96M15 143 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 LINC00477Q96M19 166 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 MAP6D1Q9H9H5 199 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 UBQLN2Q9UHD9 624 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 MGAM2Q2M2H8 2515 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 C5orf42Q9H799 3197 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 IGKV1-12A0A0C4DH73 117 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 TMEM235A6NFC5 223 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 CBY3A6NI87 242 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 GGTLC3B5MD39 225 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 TAAR5O14804 337 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 SOCS1O15524 211 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 IFNA1P01562 189 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 IGKV1D-12P01611 117 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 HOXB5P09067 269 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 FGF8P55075 233 aaPredicted RBP2.16□□□□□ -2.06
CLOCK-209ENST00000511124 TAS2R60P59551 318 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 HIST1H1AQ02539 215 aaPredicted RBP2.16□□□□□ -2.06
CLOCK-209ENST00000511124 FHL1Q13642 323 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 LGALS9BQ3B8N2 356 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 CRIP3Q6Q6R5 217 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 ZNF502Q8TBZ5 544 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 MYOZ3Q8TDC0 251 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 DTD1Q8TEA8 209 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 NTN5Q8WTR8 489 aaPredicted RBP2.16□□□□□ -2.06
CLOCK-209ENST00000511124 RNF125Q96EQ8 232 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 PYGO2Q9BRQ0 406 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 CCDC59Q9P031 241 aaKnown RBP2.16□□□□□ -2.06
CLOCK-209ENST00000511124 OR1A1Q9P1Q5 309 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 KLK11Q9UBX7 282 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 SPEGQ15772 3267 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 TANC2Q9HCD6 1990 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 CHD7Q9P2D1 2997 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 A0A0B4J2A0 478 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 RHODO00212 210 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 TNFSF12O43508 249 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 SRSF10O75494 262 aaKnown RBP2.16□□□□□ -2.06
CLOCK-209ENST00000511124 TOMM40O96008 361 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 GPX1P07203 203 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 MED14OSP0DP75 135 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 S100A12P80511 92 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 C2orf83Q53S99 150 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 TMEM268Q5VZI3 342 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 NHLRC2Q8NBF2 726 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 ENKURQ8TC29 256 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 DAZAP1Q96EP5 407 aaKnown RBP2.16□□□□□ -2.06
CLOCK-209ENST00000511124 BTF3L4Q96K17 158 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 HSPB9Q9BQS6 159 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 NXF2Q9GZY0 626 aaKnown RBP2.16□□□□□ -2.06
CLOCK-209ENST00000511124 KLK15Q9H2R5 256 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 NPVFQ9HCQ7 196 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 SHPKQ9UHJ6 478 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 CDH23Q9H251 3354 aa2.16□□□□□ -2.06
CLOCK-209ENST00000511124 IGKV1-27A0A075B6S5 117 aa2.15□□□□□ -2.06
CLOCK-209ENST00000511124 HMX3A6NHT5 357 aa2.15□□□□□ -2.06
CLOCK-209ENST00000511124 MFNGO00587 321 aa2.15□□□□□ -2.06
CLOCK-209ENST00000511124 PAX4O43316 350 aa2.15□□□□□ -2.06
CLOCK-209ENST00000511124 CDS2O95674 445 aa2.15□□□□□ -2.06
CLOCK-209ENST00000511124 PSG1P11464 419 aa2.15□□□□□ -2.06
CLOCK-209ENST00000511124 SLC25A6P12236 298 aa2.15□□□□□ -2.06
CLOCK-209ENST00000511124 CDKN1BP46527 198 aa2.15□□□□□ -2.06
CLOCK-209ENST00000511124 NANOS3P60323 173 aaKnown RBP2.15□□□□□ -2.06
CLOCK-209ENST00000511124 TNP2Q05952 138 aa2.15□□□□□ -2.06
CLOCK-209ENST00000511124 HNRNPA0Q13151 305 aaKnown RBP2.15□□□□□ -2.06
CLOCK-209ENST00000511124 LRTM2Q8N967 370 aa2.15□□□□□ -2.06
CLOCK-209ENST00000511124 ZNF485Q8NCK3 441 aa2.15□□□□□ -2.06
CLOCK-209ENST00000511124 RAB2BQ8WUD1 216 aa2.15□□□□□ -2.06
CLOCK-209ENST00000511124 NUDCD2Q8WVJ2 157 aa2.15□□□□□ -2.06
CLOCK-209ENST00000511124 S100ZQ8WXG8 99 aa2.15□□□□□ -2.06
CLOCK-209ENST00000511124 SEC22AQ96IW7 307 aa2.15□□□□□ -2.06
CLOCK-209ENST00000511124 NMES1Q9C002 83 aa2.15□□□□□ -2.06
CLOCK-209ENST00000511124 NAA60Q9H7X0 242 aa2.15□□□□□ -2.06
CLOCK-209ENST00000511124 SLC25A22Q9H936 323 aa2.15□□□□□ -2.06
CLOCK-209ENST00000511124 A0A087WX48 190 aa2.15□□□□□ -2.07
CLOCK-209ENST00000511124 TRAV8-3A0A0A6YYJ7 113 aa2.15□□□□□ -2.07
CLOCK-209ENST00000511124 EIF4EBP3O60516 100 aaPredicted RBP2.15□□□□□ -2.07
CLOCK-209ENST00000511124 GCSHP23434 173 aa2.15□□□□□ -2.07
CLOCK-209ENST00000511124 GTF2A1P52655 376 aaPredicted RBP2.15□□□□□ -2.07
CLOCK-209ENST00000511124 TAS2R30P59541 319 aa2.15□□□□□ -2.07
CLOCK-209ENST00000511124 S100A10P60903 97 aa2.15□□□□□ -2.07
CLOCK-209ENST00000511124 DLK1P80370 383 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms