RNA–Protein interactions for RNA: ENST00000510884.5

NUP54-210, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-210ENST00000510884 CECR9P0C854 216 aa3.99□□□□□ -1.77
NUP54-210ENST00000510884 PTHLHP12272 177 aa3.99□□□□□ -1.77
NUP54-210ENST00000510884 GABRG2P18507 467 aa3.99□□□□□ -1.77
NUP54-210ENST00000510884 GPX3P22352 226 aa3.99□□□□□ -1.77
NUP54-210ENST00000510884 PFN2P35080 140 aa3.99□□□□□ -1.77
NUP54-210ENST00000510884 OPRM1P35372 400 aa3.99□□□□□ -1.77
NUP54-210ENST00000510884 VDAC2P45880 294 aaPredicted RBP3.99□□□□□ -1.77
NUP54-210ENST00000510884 GALR1P47211 349 aa3.99□□□□□ -1.77
NUP54-210ENST00000510884 HERVK_113P63121 156 aa3.99□□□□□ -1.77
NUP54-210ENST00000510884 SLC25A11Q02978 314 aaKnown RBP3.99□□□□□ -1.77
NUP54-210ENST00000510884 EIF3IQ13347 325 aaKnown RBP3.99□□□□□ -1.77
NUP54-210ENST00000510884 KIAA0040Q15053 153 aa3.99□□□□□ -1.77
NUP54-210ENST00000510884 HIGD2BQ4VC39 106 aa3.99□□□□□ -1.77
NUP54-210ENST00000510884 OR4C11Q6IEV9 310 aa3.99□□□□□ -1.77
NUP54-210ENST00000510884 SLC25A34Q6PIV7 304 aa3.99□□□□□ -1.77
NUP54-210ENST00000510884 SGPP2Q8IWX5 399 aa3.99□□□□□ -1.77
NUP54-210ENST00000510884 ATOH7Q8N100 152 aa3.99□□□□□ -1.77
NUP54-210ENST00000510884 SLC25A45Q8N413 288 aa3.99□□□□□ -1.77
NUP54-210ENST00000510884 C3orf22Q8N5N4 141 aa3.99□□□□□ -1.77
NUP54-210ENST00000510884 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.99□□□□□ -1.77
NUP54-210ENST00000510884 OR4K13Q8NH42 304 aa3.99□□□□□ -1.77
NUP54-210ENST00000510884 APOBEC4Q8WW27 367 aaKnown RBP3.99□□□□□ -1.77
NUP54-210ENST00000510884 EEF1AKMT3Q96AZ1 226 aa3.99□□□□□ -1.77
NUP54-210ENST00000510884 ELSPBP1Q96BH3 223 aa3.99□□□□□ -1.77
NUP54-210ENST00000510884 RTBDNQ9BSG5 229 aaPredicted RBP3.99□□□□□ -1.77
NUP54-210ENST00000510884 IMUPQ9GZP8 106 aa3.99□□□□□ -1.77
NUP54-210ENST00000510884 EIF5A2Q9GZV4 153 aaKnown RBP3.99□□□□□ -1.77
NUP54-210ENST00000510884 ZNF665Q9H7R5 613 aa3.99□□□□□ -1.77
NUP54-210ENST00000510884 Q9H8V8 135 aa3.99□□□□□ -1.77
NUP54-210ENST00000510884 WRAP73Q9P2S5 460 aaPredicted RBP3.99□□□□□ -1.77
NUP54-210ENST00000510884 ZNF462Q96JM2 2506 aa3.99□□□□□ -1.77
NUP54-210ENST00000510884 GON4LQ3T8J9 2241 aa3.99□□□□□ -1.77
NUP54-210ENST00000510884 ATG2AQ2TAZ0 1938 aa3.99□□□□□ -1.77
NUP54-210ENST00000510884 NAV2Q8IVL1 2488 aa3.99□□□□□ -1.77
NUP54-210ENST00000510884 SCN9AQ15858 1988 aa3.98□□□□□ -1.77
NUP54-210ENST00000510884 ANKRD17O75179 2603 aaKnown RBP3.98□□□□□ -1.77
NUP54-210ENST00000510884 TRBV19A0A075B6N1 114 aa3.98□□□□□ -1.77
NUP54-210ENST00000510884 hCG_1818297A0A087WSY0 165 aa3.98□□□□□ -1.77
NUP54-210ENST00000510884 TRBV6-7A0A0A0MS04 114 aa3.98□□□□□ -1.77
NUP54-210ENST00000510884 LOC107984640A0A0U1RRK4 108 aa3.98□□□□□ -1.77
NUP54-210ENST00000510884 A8MT66 165 aa3.98□□□□□ -1.77
NUP54-210ENST00000510884 H7C1H1 209 aa3.98□□□□□ -1.77
NUP54-210ENST00000510884 M0R2P5 195 aa3.98□□□□□ -1.77
NUP54-210ENST00000510884 NDUFB6O95139 128 aa3.98□□□□□ -1.77
NUP54-210ENST00000510884 APOMO95445 188 aa3.98□□□□□ -1.77
NUP54-210ENST00000510884 OXTP01178 125 aa3.98□□□□□ -1.77
NUP54-210ENST00000510884 APOC2P02655 101 aa3.98□□□□□ -1.77
NUP54-210ENST00000510884 MT-ATP8P03928 68 aa3.98□□□□□ -1.77
NUP54-210ENST00000510884 CRYGAP11844 174 aa3.98□□□□□ -1.77
NUP54-210ENST00000510884 COX5AP20674 150 aa3.98□□□□□ -1.77
NUP54-210ENST00000510884 PSMB3P49720 205 aa3.98□□□□□ -1.77
NUP54-210ENST00000510884 C12orf74Q32Q52 190 aa3.98□□□□□ -1.77
NUP54-210ENST00000510884 Q56UQ5 140 aa3.98□□□□□ -1.77
NUP54-210ENST00000510884 Q5XG85 94 aa3.98□□□□□ -1.77
NUP54-210ENST00000510884 LCN12Q6JVE5 192 aa3.98□□□□□ -1.77
NUP54-210ENST00000510884 TMEM14EPQ6UXP3 125 aa3.98□□□□□ -1.77
NUP54-210ENST00000510884 SCGB1D4Q6XE38 83 aa3.98□□□□□ -1.77
NUP54-210ENST00000510884 ACP7Q6ZNF0 438 aa3.98□□□□□ -1.77
NUP54-210ENST00000510884 TMEM91Q6ZNR0 172 aa3.98□□□□□ -1.77
NUP54-210ENST00000510884 ANKRD29Q8N6D5 301 aa3.98□□□□□ -1.77
NUP54-210ENST00000510884 SGMS2Q8NHU3 365 aa3.98□□□□□ -1.77
NUP54-210ENST00000510884 C11orf45Q8TAV5 145 aa3.98□□□□□ -1.77
NUP54-210ENST00000510884 C18orf32Q8TCD1 76 aa3.98□□□□□ -1.77
NUP54-210ENST00000510884 PPDPFLQ8WWR9 84 aa3.98□□□□□ -1.77
NUP54-210ENST00000510884 GEMIN6Q8WXD5 167 aaKnown RBP3.98□□□□□ -1.77
NUP54-210ENST00000510884 NEURL3Q96EH8 262 aa3.98□□□□□ -1.77
NUP54-210ENST00000510884 FMC1Q96HJ9 113 aa3.98□□□□□ -1.77
NUP54-210ENST00000510884 GABARAPL3Q9BY60 117 aa3.98□□□□□ -1.77
NUP54-210ENST00000510884 PARP14Q460N5 1801 aa3.98□□□□□ -1.77
NUP54-210ENST00000510884 ADAMTSL1Q8N6G6 1762 aa3.97□□□□□ -1.77
NUP54-210ENST00000510884 PTPN13Q12923 2485 aa3.97□□□□□ -1.77
NUP54-210ENST00000510884 ZFHX2Q9C0A1 2572 aaPredicted RBP3.97□□□□□ -1.77
NUP54-210ENST00000510884 SPTBN4Q9H254 2564 aa3.97□□□□□ -1.77
NUP54-210ENST00000510884 GCN1Q92616 2671 aaKnown RBP3.97□□□□□ -1.77
NUP54-210ENST00000510884 C5orf63A6NC05 138 aa3.97□□□□□ -1.77
NUP54-210ENST00000510884 SMKR1H3BMG3 65 aa3.97□□□□□ -1.77
NUP54-210ENST00000510884 FCN1O00602 326 aa3.97□□□□□ -1.77
NUP54-210ENST00000510884 SLC25A5P05141 298 aaKnown RBP3.97□□□□□ -1.77
NUP54-210ENST00000510884 NMUP48645 174 aa3.97□□□□□ -1.77
NUP54-210ENST00000510884 DIAPH2-AS1Q14236 149 aa3.97□□□□□ -1.77
NUP54-210ENST00000510884 ZNF141Q15928 474 aa3.97□□□□□ -1.77
NUP54-210ENST00000510884 C15orf32Q32M92 178 aa3.97□□□□□ -1.77
NUP54-210ENST00000510884 MPV17L2Q567V2 206 aa3.97□□□□□ -1.77
NUP54-210ENST00000510884 Q6ZRU5 148 aa3.97□□□□□ -1.77
NUP54-210ENST00000510884 COX8CQ7Z4L0 72 aa3.97□□□□□ -1.77
NUP54-210ENST00000510884 TMEM150AQ86TG1 271 aa3.97□□□□□ -1.77
NUP54-210ENST00000510884 RPS19BP1Q86WX3 136 aaKnown RBP3.97□□□□□ -1.77
NUP54-210ENST00000510884 ZNF101Q8IZC7 436 aa3.97□□□□□ -1.77
NUP54-210ENST00000510884 LINC00471Q8N535 108 aa3.97□□□□□ -1.77
NUP54-210ENST00000510884 OR5H2Q8NGV7 314 aa3.97□□□□□ -1.77
NUP54-210ENST00000510884 NT5CQ8TCD5 201 aa3.97□□□□□ -1.77
NUP54-210ENST00000510884 SMIM4Q8WVI0 70 aa3.97□□□□□ -1.77
NUP54-210ENST00000510884 MRPL24Q96A35 216 aaKnown RBP3.97□□□□□ -1.77
NUP54-210ENST00000510884 RBMXL1Q96E39 390 aaKnown RBP3.97□□□□□ -1.77
NUP54-210ENST00000510884 NAA38Q9BRA0 125 aaKnown RBP3.97□□□□□ -1.77
NUP54-210ENST00000510884 COMMD5Q9GZQ3 224 aa3.97□□□□□ -1.77
NUP54-210ENST00000510884 ZNF331Q9NQX6 463 aaPredicted RBP3.97□□□□□ -1.77
NUP54-210ENST00000510884 LMO7Q8WWI1 1683 aa3.97□□□□□ -1.77
NUP54-210ENST00000510884 TRBV20-1A0A075B6N2 111 aa3.96□□□□□ -1.78
NUP54-210ENST00000510884 MUC21A0A0G2JKD1 596 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms