RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 AK3Q9UIJ7 227 aa5.66□□□□□ -1.5
PDGFRA-206ENST00000508170 IGKV1D-43A0A0B4J1Z2 117 aa5.66□□□□□ -1.5
PDGFRA-206ENST00000508170 UBE2L6O14933 153 aa5.66□□□□□ -1.5
PDGFRA-206ENST00000508170 RER1O15258 196 aa5.66□□□□□ -1.5
PDGFRA-206ENST00000508170 PRSS2P07478 247 aa5.66□□□□□ -1.5
PDGFRA-206ENST00000508170 LINC00032P0C843 101 aa5.66□□□□□ -1.5
PDGFRA-206ENST00000508170 LINC00869P0C866 280 aa5.66□□□□□ -1.5
PDGFRA-206ENST00000508170 SCGB1C2P0DMR2 95 aa5.66□□□□□ -1.5
PDGFRA-206ENST00000508170 SLURP1P55000 103 aa5.66□□□□□ -1.5
PDGFRA-206ENST00000508170 TMEM258P61165 79 aa5.66□□□□□ -1.5
PDGFRA-206ENST00000508170 RPL23P62829 140 aaKnown RBP5.66□□□□□ -1.5
PDGFRA-206ENST00000508170 KLRD1Q13241 179 aa5.66□□□□□ -1.5
PDGFRA-206ENST00000508170 NKAPP1Q8N9T2 125 aa5.66□□□□□ -1.5
PDGFRA-206ENST00000508170 WFDC11Q8NEX6 87 aa5.66□□□□□ -1.5
PDGFRA-206ENST00000508170 SCGB1C1Q8TD33 95 aa5.66□□□□□ -1.5
PDGFRA-206ENST00000508170 MRPS24Q96EL2 167 aaKnown RBP5.66□□□□□ -1.5
PDGFRA-206ENST00000508170 DNAH12Q6ZR08 3092 aa5.65□□□□□ -1.5
PDGFRA-206ENST00000508170 TNRC18O15417 2968 aaPredicted RBP5.65□□□□□ -1.5
PDGFRA-206ENST00000508170 OR2T8A6NH00 312 aa5.65□□□□□ -1.5
PDGFRA-206ENST00000508170 H3BMG7 143 aa5.65□□□□□ -1.5
PDGFRA-206ENST00000508170 M0R378 163 aa5.65□□□□□ -1.5
PDGFRA-206ENST00000508170 ZNF73O43830 326 aaPredicted RBP5.65□□□□□ -1.5
PDGFRA-206ENST00000508170 ZNF253O75346 499 aa5.65□□□□□ -1.5
PDGFRA-206ENST00000508170 TCRAP04437 139 aa5.65□□□□□ -1.5
PDGFRA-206ENST00000508170 POLR2JP52435 117 aaKnown RBP5.65□□□□□ -1.5
PDGFRA-206ENST00000508170 TFF2Q03403 129 aa5.65□□□□□ -1.5
PDGFRA-206ENST00000508170 AKR1C1Q04828 323 aa5.65□□□□□ -1.5
PDGFRA-206ENST00000508170 KIAA1644Q3SXP7 199 aa5.65□□□□□ -1.5
PDGFRA-206ENST00000508170 ZNF678Q5SXM1 525 aa5.65□□□□□ -1.5
PDGFRA-206ENST00000508170 C22orf39Q6P5X5 142 aa5.65□□□□□ -1.5
PDGFRA-206ENST00000508170 AMTNQ6UX39 209 aa5.65□□□□□ -1.5
PDGFRA-206ENST00000508170 OR8D4Q8NGM9 314 aa5.65□□□□□ -1.5
PDGFRA-206ENST00000508170 TOMM6Q96B49 74 aa5.65□□□□□ -1.5
PDGFRA-206ENST00000508170 YPEL4Q96NS1 127 aa5.65□□□□□ -1.5
PDGFRA-206ENST00000508170 SMCO4Q9NRQ5 59 aa5.65□□□□□ -1.5
PDGFRA-206ENST00000508170 DNAJC15Q9Y5T4 150 aa5.65□□□□□ -1.5
PDGFRA-206ENST00000508170 COL4A4P53420 1690 aaPredicted RBP5.65□□□□□ -1.51
PDGFRA-206ENST00000508170 IGHV1-58A0A0C4DH39 117 aa5.64□□□□□ -1.51
PDGFRA-206ENST00000508170 RRN3P1Q2M238 152 aa5.64□□□□□ -1.51
PDGFRA-206ENST00000508170 SUMO4Q6EEV6 95 aa5.64□□□□□ -1.51
PDGFRA-206ENST00000508170 UNQ5815/PRO19632Q6UWF5 114 aa5.64□□□□□ -1.51
PDGFRA-206ENST00000508170 LINC00476Q8WZB0 136 aa5.64□□□□□ -1.51
PDGFRA-206ENST00000508170 PSMF1Q92530 271 aa5.64□□□□□ -1.51
PDGFRA-206ENST00000508170 MS4A6EQ96DS6 147 aa5.64□□□□□ -1.51
PDGFRA-206ENST00000508170 TUBA4BQ9H853 241 aa5.64□□□□□ -1.51
PDGFRA-206ENST00000508170 CCL28Q9NRJ3 127 aa5.64□□□□□ -1.51
PDGFRA-206ENST00000508170 ATG2AQ2TAZ0 1938 aa5.64□□□□□ -1.51
PDGFRA-206ENST00000508170 H3BQ15 152 aa5.64□□□□□ -1.51
PDGFRA-206ENST00000508170 K7ESM1 405 aa5.64□□□□□ -1.51
PDGFRA-206ENST00000508170 NMUP48645 174 aa5.64□□□□□ -1.51
PDGFRA-206ENST00000508170 ZNF80P51504 273 aaPredicted RBP5.64□□□□□ -1.51
PDGFRA-206ENST00000508170 Q0VFX4 171 aa5.64□□□□□ -1.51
PDGFRA-206ENST00000508170 SLC25A34Q6PIV7 304 aa5.64□□□□□ -1.51
PDGFRA-206ENST00000508170 Q6ZUT4 128 aa5.64□□□□□ -1.51
PDGFRA-206ENST00000508170 KCNRGQ8N5I3 272 aa5.64□□□□□ -1.51
PDGFRA-206ENST00000508170 OR5AK2Q8NH90 309 aa5.64□□□□□ -1.51
PDGFRA-206ENST00000508170 TMEM158Q8WZ71 300 aa5.64□□□□□ -1.51
PDGFRA-206ENST00000508170 PRAC1Q96KF2 57 aa5.64□□□□□ -1.51
PDGFRA-206ENST00000508170 C2orf50Q96LR7 162 aa5.64□□□□□ -1.51
PDGFRA-206ENST00000508170 TBL1YQ9BQ87 522 aa5.64□□□□□ -1.51
PDGFRA-206ENST00000508170 NPVFQ9HCQ7 196 aa5.64□□□□□ -1.51
PDGFRA-206ENST00000508170 CUL9Q8IWT3 2517 aa5.64□□□□□ -1.51
PDGFRA-206ENST00000508170 KMT2EQ8IZD2 1858 aa5.63□□□□□ -1.51
PDGFRA-206ENST00000508170 TRAV9-2A0A087WT02 112 aa5.63□□□□□ -1.51
PDGFRA-206ENST00000508170 GEMIN2O14893 280 aaKnown RBP5.63□□□□□ -1.51
PDGFRA-206ENST00000508170 IGLV3-25P01717 112 aa5.63□□□□□ -1.51
PDGFRA-206ENST00000508170 CA7P43166 264 aa5.63□□□□□ -1.51
PDGFRA-206ENST00000508170 MRPL2Q5T653 305 aaKnown RBP5.63□□□□□ -1.51
PDGFRA-206ENST00000508170 LCA10Q71F78 164 aa5.63□□□□□ -1.51
PDGFRA-206ENST00000508170 AAED1Q7RTV5 226 aa5.63□□□□□ -1.51
PDGFRA-206ENST00000508170 ATOH7Q8N100 152 aa5.63□□□□□ -1.51
PDGFRA-206ENST00000508170 C10orf126Q8N4M7 172 aa5.63□□□□□ -1.51
PDGFRA-206ENST00000508170 OR10AC1Q8NH08 325 aa5.63□□□□□ -1.51
PDGFRA-206ENST00000508170 PRSS3P2Q8NHM4 247 aa5.63□□□□□ -1.51
PDGFRA-206ENST00000508170 STAG3L4Q8TBR4 150 aa5.63□□□□□ -1.51
PDGFRA-206ENST00000508170 ASF1BQ9NVP2 202 aa5.63□□□□□ -1.51
PDGFRA-206ENST00000508170 NUP210Q8TEM1 1887 aaPredicted RBP5.63□□□□□ -1.51
PDGFRA-206ENST00000508170 TRAV13-1A0A0B4J241 112 aa5.63□□□□□ -1.51
PDGFRA-206ENST00000508170 IGLL5B9A064 214 aa5.63□□□□□ -1.51
PDGFRA-206ENST00000508170 CD5LO43866 347 aa5.63□□□□□ -1.51
PDGFRA-206ENST00000508170 MT-ND6P03923 174 aa5.63□□□□□ -1.51
PDGFRA-206ENST00000508170 INPP1P49441 399 aa5.63□□□□□ -1.51
PDGFRA-206ENST00000508170 TDRG1Q3Y452 100 aa5.63□□□□□ -1.51
PDGFRA-206ENST00000508170 ARTNQ5T4W7 220 aa5.63□□□□□ -1.51
PDGFRA-206ENST00000508170 C16orf95Q9H693 158 aa5.63□□□□□ -1.51
PDGFRA-206ENST00000508170 AIG1Q9NVV5 245 aa5.63□□□□□ -1.51
PDGFRA-206ENST00000508170 CHCHD2Q9Y6H1 151 aaPredicted RBP5.63□□□□□ -1.51
PDGFRA-206ENST00000508170 MYLKQ15746 1914 aa5.62□□□□□ -1.51
PDGFRA-206ENST00000508170 ANKRD12Q6UB98 2062 aa5.62□□□□□ -1.51
PDGFRA-206ENST00000508170 CACNA1AO00555 2505 aa5.62□□□□□ -1.51
PDGFRA-206ENST00000508170 G3V3Q6 166 aa5.62□□□□□ -1.51
PDGFRA-206ENST00000508170 CST7O76096 145 aa5.62□□□□□ -1.51
PDGFRA-206ENST00000508170 IGLV3-27P01718 113 aa5.62□□□□□ -1.51
PDGFRA-206ENST00000508170 ZNF705DP0CH99 300 aaPredicted RBP5.62□□□□□ -1.51
PDGFRA-206ENST00000508170 ZNF90Q03938 601 aa5.62□□□□□ -1.51
PDGFRA-206ENST00000508170 TMEM183BQ1AE95 376 aa5.62□□□□□ -1.51
PDGFRA-206ENST00000508170 RNF182Q8N6D2 247 aa5.62□□□□□ -1.51
PDGFRA-206ENST00000508170 H1FXQ92522 213 aaKnown RBP5.62□□□□□ -1.51
PDGFRA-206ENST00000508170 PARP12Q9H0J9 701 aaKnown RBP5.62□□□□□ -1.51
PDGFRA-206ENST00000508170 LINC00312Q9Y6C7 94 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms