RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 RAB2AP61019 212 aa13.49□□□□□ -0.25
RNF4-209ENST00000507784 LYZP61626 148 aa13.49□□□□□ -0.25
RNF4-209ENST00000507784 FOXL1Q12952 345 aa13.49□□□□□ -0.25
RNF4-209ENST00000507784 TMEM41BQ5BJD5 291 aa13.49□□□□□ -0.25
RNF4-209ENST00000507784 FAM122CQ6P4D5 195 aa13.49□□□□□ -0.25
RNF4-209ENST00000507784 ZNF600Q6ZNG1 722 aa13.49□□□□□ -0.25
RNF4-209ENST00000507784 OR51G1Q8NGK1 321 aa13.49□□□□□ -0.25
RNF4-209ENST00000507784 OR10G4Q8NGN3 311 aa13.49□□□□□ -0.25
RNF4-209ENST00000507784 OR10G9Q8NGN4 311 aa13.49□□□□□ -0.25
RNF4-209ENST00000507784 OR10G7Q8NGN6 311 aa13.49□□□□□ -0.25
RNF4-209ENST00000507784 OR1B1Q8NGR6 318 aa13.49□□□□□ -0.25
RNF4-209ENST00000507784 FAM213BQ8TBF2 198 aa13.49□□□□□ -0.25
RNF4-209ENST00000507784 WIPF2Q8TF74 440 aaPredicted RBP13.49□□□□□ -0.25
RNF4-209ENST00000507784 RNF141Q8WVD5 230 aa13.49□□□□□ -0.25
RNF4-209ENST00000507784 PBDC1Q9BVG4 233 aa13.49□□□□□ -0.25
RNF4-209ENST00000507784 A0A1W2PRX2 142 aa13.48□□□□□ -0.25
RNF4-209ENST00000507784 UMAD1C9J7I0 102 aa13.48□□□□□ -0.25
RNF4-209ENST00000507784 COX7A2P2O60397 106 aa13.48□□□□□ -0.25
RNF4-209ENST00000507784 OR5G3P0C626 314 aa13.48□□□□□ -0.25
RNF4-209ENST00000507784 M6PRP20645 277 aa13.48□□□□□ -0.25
RNF4-209ENST00000507784 CDX1P47902 265 aaPredicted RBP13.48□□□□□ -0.25
RNF4-209ENST00000507784 RELQ04864 619 aaPredicted RBP13.48□□□□□ -0.25
RNF4-209ENST00000507784 GCSAMLQ5JQS6 135 aa13.48□□□□□ -0.25
RNF4-209ENST00000507784 FAM209BQ5JX69 171 aa13.48□□□□□ -0.25
RNF4-209ENST00000507784 C18orf65Q6ZTR6 163 aa13.48□□□□□ -0.25
RNF4-209ENST00000507784 KLHL30-AS1Q8NEE0 82 aa13.48□□□□□ -0.25
RNF4-209ENST00000507784 PCNPQ8WW12 178 aaKnown RBP13.48□□□□□ -0.25
RNF4-209ENST00000507784 PUS1Q9Y606 427 aaKnown RBP eCLIP13.48□□□□□ -0.25
RNF4-209ENST00000507784 ZNF705EA8MWA4 302 aaPredicted RBP13.47□□□□□ -0.25
RNF4-209ENST00000507784 GGCTO75223 188 aaKnown RBP13.47□□□□□ -0.25
RNF4-209ENST00000507784 OR2C1O95371 312 aa13.47□□□□□ -0.25
RNF4-209ENST00000507784 IL4P05112 153 aa13.47□□□□□ -0.25
RNF4-209ENST00000507784 RAB5CP51148 216 aa13.47□□□□□ -0.25
RNF4-209ENST00000507784 RAB14P61106 215 aa13.47□□□□□ -0.25
RNF4-209ENST00000507784 OR1L4Q8NGR5 311 aa13.47□□□□□ -0.25
RNF4-209ENST00000507784 CITED2Q99967 270 aaPredicted RBP13.47□□□□□ -0.25
RNF4-209ENST00000507784 RPRMQ9NS64 109 aa13.47□□□□□ -0.25
RNF4-209ENST00000507784 A0A1W2PPV4 95 aa13.46□□□□□ -0.25
RNF4-209ENST00000507784 BMPR1BO00238 502 aa13.46□□□□□ -0.25
RNF4-209ENST00000507784 HYPMO75409 117 aa13.46□□□□□ -0.25
RNF4-209ENST00000507784 C10orf113Q5VZT2 155 aa13.46□□□□□ -0.25
RNF4-209ENST00000507784 PRIMA1Q86XR5 153 aa13.46□□□□□ -0.25
RNF4-209ENST00000507784 ACTR3CQ9C0K3 210 aaPredicted RBP13.46□□□□□ -0.25
RNF4-209ENST00000507784 DNAJC4Q9NNZ3 241 aa13.46□□□□□ -0.25
RNF4-209ENST00000507784 TSSC4Q9Y5U2 329 aaPredicted RBP13.46□□□□□ -0.25
RNF4-209ENST00000507784 IGHV4OR15-8A0A075B7B6 117 aa13.45□□□□□ -0.26
RNF4-209ENST00000507784 IGHV3OR16-8A0A075B7F1 116 aa13.45□□□□□ -0.26
RNF4-209ENST00000507784 A0A087WW49 117 aa13.45□□□□□ -0.26
RNF4-209ENST00000507784 WI2-2373I1.2A0A1W2PRP0 233 aa13.45□□□□□ -0.26
RNF4-209ENST00000507784 HSPB1P04792 205 aaKnown RBP13.45□□□□□ -0.26
RNF4-209ENST00000507784 FHITP49789 147 aa13.45□□□□□ -0.26
RNF4-209ENST00000507784 PXDC1Q5TGL8 231 aa13.45□□□□□ -0.26
RNF4-209ENST00000507784 TOMM20LQ6UXN7 152 aa13.45□□□□□ -0.26
RNF4-209ENST00000507784 LRRC20Q8TCA0 184 aa13.45□□□□□ -0.26
RNF4-209ENST00000507784 C4orf3Q8WVX3 66 aa13.45□□□□□ -0.26
RNF4-209ENST00000507784 DPF1Q92782 380 aa13.45□□□□□ -0.26
RNF4-209ENST00000507784 RNF125Q96EQ8 232 aa13.45□□□□□ -0.26
RNF4-209ENST00000507784 PFDN5Q99471 154 aa13.45□□□□□ -0.26
RNF4-209ENST00000507784 C20orf24Q9BUV8 137 aa13.45□□□□□ -0.26
RNF4-209ENST00000507784 ZNF320A2RRD8 509 aa13.44□□□□□ -0.26
RNF4-209ENST00000507784 I3L521 148 aa13.44□□□□□ -0.26
RNF4-209ENST00000507784 RGS13O14921 159 aa13.44□□□□□ -0.26
RNF4-209ENST00000507784 EIF3GO75821 320 aaKnown RBP eCLIP13.44□□□□□ -0.26
RNF4-209ENST00000507784 CDC34P49427 236 aaPredicted RBP13.44□□□□□ -0.26
RNF4-209ENST00000507784 KRTAP10-3P60369 221 aa13.44□□□□□ -0.26
RNF4-209ENST00000507784 RHOBP62745 196 aa13.44□□□□□ -0.26
RNF4-209ENST00000507784 BLOC1S1P78537 153 aa13.44□□□□□ -0.26
RNF4-209ENST00000507784 RPEL1Q2QD12 228 aa13.44□□□□□ -0.26
RNF4-209ENST00000507784 DEFB136Q30KP8 78 aa13.44□□□□□ -0.26
RNF4-209ENST00000507784 KRTAP24-1Q3LI83 254 aa13.44□□□□□ -0.26
RNF4-209ENST00000507784 FAM78BQ5VT40 261 aa13.44□□□□□ -0.26
RNF4-209ENST00000507784 PATE2Q6UY27 113 aa13.44□□□□□ -0.26
RNF4-209ENST00000507784 DPPA3Q6W0C5 159 aa13.44□□□□□ -0.26
RNF4-209ENST00000507784 TMEM37Q8WXS4 190 aa13.44□□□□□ -0.26
RNF4-209ENST00000507784 SLC25A22Q9H936 323 aa13.44□□□□□ -0.26
RNF4-209ENST00000507784 HIGD1AQ9Y241 93 aa13.44□□□□□ -0.26
RNF4-209ENST00000507784 ELOA3CA0A087WX78 387 aaPredicted RBP13.43□□□□□ -0.26
RNF4-209ENST00000507784 HMGB3O15347 200 aaKnown RBP13.43□□□□□ -0.26
RNF4-209ENST00000507784 PLP1P60201 277 aa13.43□□□□□ -0.26
RNF4-209ENST00000507784 NSUN5P1Q3KNT7 163 aa13.43□□□□□ -0.26
RNF4-209ENST00000507784 FAM106AQ4KMX7 169 aa13.43□□□□□ -0.26
RNF4-209ENST00000507784 AWAT1Q58HT5 328 aa13.43□□□□□ -0.26
RNF4-209ENST00000507784 SPATA31B1PQ5VZV4 182 aa13.43□□□□□ -0.26
RNF4-209ENST00000507784 C8orf86Q6ZUL3 223 aa13.43□□□□□ -0.26
RNF4-209ENST00000507784 RPP25LQ8N5L8 163 aaKnown RBP13.43□□□□□ -0.26
RNF4-209ENST00000507784 OR1N2Q8NGR9 330 aa13.43□□□□□ -0.26
RNF4-209ENST00000507784 GATAD1Q8WUU5 269 aa13.43□□□□□ -0.26
RNF4-209ENST00000507784 WFDC12Q8WWY7 111 aa13.43□□□□□ -0.26
RNF4-209ENST00000507784 RCC1LQ96I51 464 aaKnown RBP13.43□□□□□ -0.26
RNF4-209ENST00000507784 RNF2Q99496 336 aa13.43□□□□□ -0.26
RNF4-209ENST00000507784 RABAC1Q9UI14 185 aa13.43□□□□□ -0.26
RNF4-209ENST00000507784 CUBNO60494 3623 aa13.43□□□□□ -0.26
RNF4-209ENST00000507784 A0A1B0GV50 99 aa13.42□□□□□ -0.26
RNF4-209ENST00000507784 LINC01619G3V211 115 aa13.42□□□□□ -0.26
RNF4-209ENST00000507784 NDUFA4O00483 81 aa13.42□□□□□ -0.26
RNF4-209ENST00000507784 ZNF207O43670 478 aaKnown RBP13.42□□□□□ -0.26
RNF4-209ENST00000507784 H2AFB1P0C5Y9 115 aa13.42□□□□□ -0.26
RNF4-209ENST00000507784 USF2Q15853 346 aaPredicted RBP13.42□□□□□ -0.26
RNF4-209ENST00000507784 LCN15Q6UWW0 184 aa13.42□□□□□ -0.26
RNF4-209ENST00000507784 MIR17HGQ75NE6 70 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms