RNA–Protein interactions for RNA: ENST00000507316.1

TUSC3-205, Transcript of tumor suppressor candidate 3, human

TSL 3

Gene TUSC3, Length 573 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUSC3-205	ENST00000507316	KLF13	Q9Y2Y9	288 aa	Predicted RBP	4.12	□□□□□ -1.75
TUSC3-205	ENST00000507316		V9GYV3	84 aa		4.12	□□□□□ -1.75
TUSC3-205	ENST00000507316	PLXNB3	Q9ULL4	1909 aa		4.11	□□□□□ -1.75
TUSC3-205	ENST00000507316	SCN3A	Q9NY46	2000 aa		4.11	□□□□□ -1.75
TUSC3-205	ENST00000507316	MDC1	Q14676	2089 aa	Known RBP	4.11	□□□□□ -1.75
TUSC3-205	ENST00000507316	IGLV3-10	A0A075B6K4	115 aa		4.11	□□□□□ -1.75
TUSC3-205	ENST00000507316	TRAV2	A0A0B4J234	112 aa		4.11	□□□□□ -1.75
TUSC3-205	ENST00000507316	TCRBV4S1A1T	A0A5B7	111 aa		4.11	□□□□□ -1.75
TUSC3-205	ENST00000507316	TMEM89	A2RUT3	159 aa		4.11	□□□□□ -1.75
TUSC3-205	ENST00000507316		A8MWL6	223 aa		4.11	□□□□□ -1.75
TUSC3-205	ENST00000507316	ZIC3	O60481	467 aa		4.11	□□□□□ -1.75
TUSC3-205	ENST00000507316	LMX1B	O60663	402 aa		4.11	□□□□□ -1.75
TUSC3-205	ENST00000507316	NDUFB4	O95168	129 aa		4.11	□□□□□ -1.75
TUSC3-205	ENST00000507316	EPPIN	O95925	133 aa		4.11	□□□□□ -1.75
TUSC3-205	ENST00000507316	RBP4	P02753	201 aa		4.11	□□□□□ -1.75
TUSC3-205	ENST00000507316		P0DMU3	169 aa		4.11	□□□□□ -1.75
TUSC3-205	ENST00000507316	FAM231A	P0DMU4	169 aa		4.11	□□□□□ -1.75
TUSC3-205	ENST00000507316	FAM231C	P0DMU5	169 aa		4.11	□□□□□ -1.75
TUSC3-205	ENST00000507316	WT1	P19544	449 aa	Predicted RBP	4.11	□□□□□ -1.75
TUSC3-205	ENST00000507316	ZFP36	P26651	326 aa	Known RBP	4.11	□□□□□ -1.75
TUSC3-205	ENST00000507316	TNFRSF4	P43489	277 aa		4.11	□□□□□ -1.75
TUSC3-205	ENST00000507316	PFN3	P60673	137 aa		4.11	□□□□□ -1.75
TUSC3-205	ENST00000507316	PPP1CA	P62136	330 aa		4.11	□□□□□ -1.75
TUSC3-205	ENST00000507316	GNB1	P62873	340 aa		4.11	□□□□□ -1.75
TUSC3-205	ENST00000507316	EBI3	Q14213	229 aa		4.11	□□□□□ -1.75
TUSC3-205	ENST00000507316	ZNF718	Q3SXZ3	478 aa		4.11	□□□□□ -1.75
TUSC3-205	ENST00000507316	WDR38	Q5JTN6	314 aa		4.11	□□□□□ -1.75
TUSC3-205	ENST00000507316	MRPL2	Q5T653	305 aa	Known RBP	4.11	□□□□□ -1.75
TUSC3-205	ENST00000507316	LINC01590	Q5TEZ4	76 aa		4.11	□□□□□ -1.75
TUSC3-205	ENST00000507316	ASPHD1	Q5U4P2	390 aa		4.11	□□□□□ -1.75
TUSC3-205	ENST00000507316	CD164L2	Q6UWJ8	174 aa		4.11	□□□□□ -1.75
TUSC3-205	ENST00000507316	LYZL2	Q7Z4W2	148 aa		4.11	□□□□□ -1.75
TUSC3-205	ENST00000507316	AMN1	Q8IY45	258 aa		4.11	□□□□□ -1.75
TUSC3-205	ENST00000507316	PIANP	Q8IYJ0	282 aa		4.11	□□□□□ -1.75
TUSC3-205	ENST00000507316	OR5AS1	Q8N127	324 aa		4.11	□□□□□ -1.75
TUSC3-205	ENST00000507316	CIART	Q8N365	385 aa	Predicted RBP	4.11	□□□□□ -1.75
TUSC3-205	ENST00000507316	RPP25L	Q8N5L8	163 aa	Known RBP	4.11	□□□□□ -1.75
TUSC3-205	ENST00000507316	CLEC4C	Q8WTT0	213 aa		4.11	□□□□□ -1.75
TUSC3-205	ENST00000507316	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	4.11	□□□□□ -1.75
TUSC3-205	ENST00000507316	ZNF689	Q96CS4	500 aa	Predicted RBP	4.11	□□□□□ -1.75
TUSC3-205	ENST00000507316	DPH3	Q96FX2	82 aa		4.11	□□□□□ -1.75
TUSC3-205	ENST00000507316	DOCK9	Q9BZ29	2069 aa		4.1	□□□□□ -1.75
TUSC3-205	ENST00000507316	TRAV8-2	A0A0B4J237	113 aa		4.1	□□□□□ -1.75
TUSC3-205	ENST00000507316	TRAV13-1	A0A0B4J241	112 aa		4.1	□□□□□ -1.75
TUSC3-205	ENST00000507316	TRAV8-4	A0A0B4J246	113 aa		4.1	□□□□□ -1.75
TUSC3-205	ENST00000507316	TEX22	C9J3V5	150 aa		4.1	□□□□□ -1.75
TUSC3-205	ENST00000507316		F2Z2F3	143 aa		4.1	□□□□□ -1.75
TUSC3-205	ENST00000507316	FCGR3B	O75015	233 aa		4.1	□□□□□ -1.75
TUSC3-205	ENST00000507316	CLDN7	O95471	211 aa		4.1	□□□□□ -1.75
TUSC3-205	ENST00000507316	NPY	P01303	97 aa		4.1	□□□□□ -1.75
TUSC3-205	ENST00000507316	PYY	P10082	97 aa		4.1	□□□□□ -1.75
TUSC3-205	ENST00000507316	CXCL8	P10145	99 aa		4.1	□□□□□ -1.75
TUSC3-205	ENST00000507316	CLDN17	P56750	224 aa		4.1	□□□□□ -1.75
TUSC3-205	ENST00000507316	TRIP6	Q15654	476 aa	Known RBP	4.1	□□□□□ -1.75
TUSC3-205	ENST00000507316	C12orf74	Q32Q52	190 aa		4.1	□□□□□ -1.75
TUSC3-205	ENST00000507316	BEAN1	Q3B7T3	259 aa		4.1	□□□□□ -1.75
TUSC3-205	ENST00000507316	ZNF672	Q499Z4	452 aa	Predicted RBP	4.1	□□□□□ -1.75
TUSC3-205	ENST00000507316	FAM120AOS	Q5T036	256 aa		4.1	□□□□□ -1.75
TUSC3-205	ENST00000507316	TMEM170B	Q5T4T1	132 aa		4.1	□□□□□ -1.75
TUSC3-205	ENST00000507316	FAM219B	Q5XKK7	198 aa		4.1	□□□□□ -1.75
TUSC3-205	ENST00000507316	TMEM14EP	Q6UXP3	125 aa		4.1	□□□□□ -1.75
TUSC3-205	ENST00000507316		Q6YL49	198 aa		4.1	□□□□□ -1.75
TUSC3-205	ENST00000507316	DGAT2L6	Q6ZPD8	337 aa		4.1	□□□□□ -1.75
TUSC3-205	ENST00000507316	SLC25A48	Q6ZT89	311 aa	Known RBP	4.1	□□□□□ -1.75
TUSC3-205	ENST00000507316	RPS19BP1	Q86WX3	136 aa	Known RBP	4.1	□□□□□ -1.75
TUSC3-205	ENST00000507316	ABHD12	Q8N2K0	398 aa		4.1	□□□□□ -1.75
TUSC3-205	ENST00000507316	RPRML	Q8N4K4	120 aa		4.1	□□□□□ -1.75
TUSC3-205	ENST00000507316	ZPLD1	Q8TCW7	415 aa		4.1	□□□□□ -1.75
TUSC3-205	ENST00000507316	IL1F10	Q8WWZ1	152 aa		4.1	□□□□□ -1.75
TUSC3-205	ENST00000507316	CHAC1	Q9BUX1	264 aa		4.1	□□□□□ -1.75
TUSC3-205	ENST00000507316	LINC00597	Q9H2U6	94 aa		4.1	□□□□□ -1.75
TUSC3-205	ENST00000507316	TAS2R4	Q9NYW5	299 aa		4.1	□□□□□ -1.75
TUSC3-205	ENST00000507316	CACNG5	Q9UF02	275 aa		4.1	□□□□□ -1.75
TUSC3-205	ENST00000507316	ZNF256	Q9Y2P7	627 aa	Predicted RBP	4.1	□□□□□ -1.75
TUSC3-205	ENST00000507316		R4GMQ9	66 aa		4.1	□□□□□ -1.75
TUSC3-205	ENST00000507316	MGAM	O43451	1857 aa		4.09	□□□□□ -1.75
TUSC3-205	ENST00000507316	TRPM6	Q9BX84	2022 aa		4.09	□□□□□ -1.75
TUSC3-205	ENST00000507316	IGKV6D-21	A0A0A0MT36	114 aa		4.09	□□□□□ -1.75
TUSC3-205	ENST00000507316	TRAV4	A0A0B4J268	109 aa		4.09	□□□□□ -1.75
TUSC3-205	ENST00000507316		A0A0U1RQV1	116 aa		4.09	□□□□□ -1.75
TUSC3-205	ENST00000507316	LOC107984640	A0A0U1RRK4	108 aa		4.09	□□□□□ -1.75
TUSC3-205	ENST00000507316	MYMX	A0A1B0GTQ4	84 aa		4.09	□□□□□ -1.75
TUSC3-205	ENST00000507316	SMIM28	A0A1B0GU29	152 aa		4.09	□□□□□ -1.75
TUSC3-205	ENST00000507316	MED19	A0JLT2	244 aa	Predicted RBP	4.09	□□□□□ -1.75
TUSC3-205	ENST00000507316	SH2D7	A6NKC9	451 aa	Predicted RBP	4.09	□□□□□ -1.75
TUSC3-205	ENST00000507316	CCL22	O00626	93 aa		4.09	□□□□□ -1.75
TUSC3-205	ENST00000507316	SYNGR2	O43760	224 aa		4.09	□□□□□ -1.75
TUSC3-205	ENST00000507316	B4GALT1	P15291	398 aa		4.09	□□□□□ -1.75
TUSC3-205	ENST00000507316	RPL35A	P18077	110 aa	Known RBP	4.09	□□□□□ -1.75
TUSC3-205	ENST00000507316	INSL3	P51460	131 aa		4.09	□□□□□ -1.75
TUSC3-205	ENST00000507316	LOXL3	P58215	753 aa		4.09	□□□□□ -1.75
TUSC3-205	ENST00000507316	LOXL1	Q08397	574 aa	Predicted RBP	4.09	□□□□□ -1.75
TUSC3-205	ENST00000507316	SLC38A11	Q08AI6	406 aa		4.09	□□□□□ -1.75
TUSC3-205	ENST00000507316	C1orf61	Q13536	156 aa		4.09	□□□□□ -1.75
TUSC3-205	ENST00000507316	C4orf26	Q17RF5	130 aa		4.09	□□□□□ -1.75
TUSC3-205	ENST00000507316	VWC2	Q2TAL6	325 aa		4.09	□□□□□ -1.75
TUSC3-205	ENST00000507316	DGAT2L7P	Q6IED9	249 aa		4.09	□□□□□ -1.75
TUSC3-205	ENST00000507316	MFSD12	Q6NUT3	480 aa		4.09	□□□□□ -1.75
TUSC3-205	ENST00000507316	AAED1	Q7RTV5	226 aa		4.09	□□□□□ -1.75
TUSC3-205	ENST00000507316	GTSCR1	Q86UQ5	136 aa		4.09	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms