RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 HIST1H1DP16402 221 aaKnown RBP4.78□□□□□ -1.64
VCAN-207ENST00000507162 FCGR2CP31995 323 aa4.78□□□□□ -1.64
VCAN-207ENST00000507162 PSMB3P49720 205 aa4.78□□□□□ -1.64
VCAN-207ENST00000507162 TAS2R60P59551 318 aa4.78□□□□□ -1.64
VCAN-207ENST00000507162 PRCDQ00LT1 54 aa4.78□□□□□ -1.64
VCAN-207ENST00000507162 DHODHQ02127 395 aa4.78□□□□□ -1.64
VCAN-207ENST00000507162 ACOT6Q3I5F7 207 aaPredicted RBP4.78□□□□□ -1.64
VCAN-207ENST00000507162 HSD17B12Q53GQ0 312 aa4.78□□□□□ -1.64
VCAN-207ENST00000507162 LCE4AQ5TA78 99 aa4.78□□□□□ -1.64
VCAN-207ENST00000507162 CNIH2Q6PI25 160 aa4.78□□□□□ -1.64
VCAN-207ENST00000507162 LYPD5Q6UWN5 251 aa4.78□□□□□ -1.64
VCAN-207ENST00000507162 Q6ZS49 121 aa4.78□□□□□ -1.64
VCAN-207ENST00000507162 GPR141Q7Z602 305 aa4.78□□□□□ -1.64
VCAN-207ENST00000507162 PHYHIPQ92561 330 aa4.78□□□□□ -1.64
VCAN-207ENST00000507162 TMEM203Q969S6 136 aa4.78□□□□□ -1.64
VCAN-207ENST00000507162 RPRMQ9NS64 109 aa4.78□□□□□ -1.64
VCAN-207ENST00000507162 COMMD9Q9P000 198 aa4.78□□□□□ -1.64
VCAN-207ENST00000507162 POMPQ9Y244 141 aa4.78□□□□□ -1.64
VCAN-207ENST00000507162 AK6Q9Y3D8 172 aaKnown RBP4.78□□□□□ -1.64
VCAN-207ENST00000507162 AP4S1Q9Y587 144 aa4.78□□□□□ -1.64
VCAN-207ENST00000507162 ZNF98A6NK75 572 aa4.77□□□□□ -1.65
VCAN-207ENST00000507162 H3BS24 57 aa4.77□□□□□ -1.65
VCAN-207ENST00000507162 RLN2P04090 185 aa4.77□□□□□ -1.65
VCAN-207ENST00000507162 IL4P05112 153 aa4.77□□□□□ -1.65
VCAN-207ENST00000507162 PTHLHP12272 177 aa4.77□□□□□ -1.65
VCAN-207ENST00000507162 OPRK1P41145 380 aa4.77□□□□□ -1.65
VCAN-207ENST00000507162 FXYD4P59646 89 aa4.77□□□□□ -1.65
VCAN-207ENST00000507162 HACD4Q5VWC8 232 aa4.77□□□□□ -1.65
VCAN-207ENST00000507162 SFXN4Q6P4A7 337 aa4.77□□□□□ -1.65
VCAN-207ENST00000507162 AMTNQ6UX39 209 aa4.77□□□□□ -1.65
VCAN-207ENST00000507162 Q6ZRU5 148 aa4.77□□□□□ -1.65
VCAN-207ENST00000507162 WFDC10BQ8IUB3 73 aa4.77□□□□□ -1.65
VCAN-207ENST00000507162 OR11H7Q8NGC8 314 aa4.77□□□□□ -1.65
VCAN-207ENST00000507162 OR6F1Q8NGZ6 308 aa4.77□□□□□ -1.65
VCAN-207ENST00000507162 OR4X1Q8NH49 305 aa4.77□□□□□ -1.65
VCAN-207ENST00000507162 OR4A16Q8NH70 328 aa4.77□□□□□ -1.65
VCAN-207ENST00000507162 NRG4Q8WWG1 115 aa4.77□□□□□ -1.65
VCAN-207ENST00000507162 TRIM63Q969Q1 353 aa4.77□□□□□ -1.65
VCAN-207ENST00000507162 TMEM80Q96HE8 168 aa4.77□□□□□ -1.65
VCAN-207ENST00000507162 C20orf173Q96LM9 149 aa4.77□□□□□ -1.65
VCAN-207ENST00000507162 LINC00467Q9BRT7 94 aa4.77□□□□□ -1.65
VCAN-207ENST00000507162 TMPRSS5Q9H3S3 457 aa4.77□□□□□ -1.65
VCAN-207ENST00000507162 Q9HAA7 133 aa4.77□□□□□ -1.65
VCAN-207ENST00000507162 PPP1R14DQ9NXH3 145 aa4.77□□□□□ -1.65
VCAN-207ENST00000507162 DIMT1Q9UNQ2 313 aaKnown RBP4.77□□□□□ -1.65
VCAN-207ENST00000507162 ICOSQ9Y6W8 199 aa4.77□□□□□ -1.65
VCAN-207ENST00000507162 LPAP08519 4548 aa4.76□□□□□ -1.65
VCAN-207ENST00000507162 TRAV30A0A087WSZ9 112 aa4.76□□□□□ -1.65
VCAN-207ENST00000507162 LECT2O14960 151 aa4.76□□□□□ -1.65
VCAN-207ENST00000507162 GSTZ1O43708 216 aaPredicted RBP4.76□□□□□ -1.65
VCAN-207ENST00000507162 FCER2P06734 321 aa4.76□□□□□ -1.65
VCAN-207ENST00000507162 CALB2P22676 271 aa4.76□□□□□ -1.65
VCAN-207ENST00000507162 DTYMKP23919 212 aa4.76□□□□□ -1.65
VCAN-207ENST00000507162 CNN1P51911 297 aaKnown RBP4.76□□□□□ -1.65
VCAN-207ENST00000507162 HSPE1P61604 102 aaKnown RBP4.76□□□□□ -1.65
VCAN-207ENST00000507162 TBCEQ15813 527 aaPredicted RBP4.76□□□□□ -1.65
VCAN-207ENST00000507162 CDNFQ49AH0 187 aa4.76□□□□□ -1.65
VCAN-207ENST00000507162 ZNF493Q6ZR52 646 aa4.76□□□□□ -1.65
VCAN-207ENST00000507162 ZNF818PQ6ZRF7 136 aa4.76□□□□□ -1.65
VCAN-207ENST00000507162 LRTM2Q8N967 370 aa4.76□□□□□ -1.65
VCAN-207ENST00000507162 ZNF485Q8NCK3 441 aa4.76□□□□□ -1.65
VCAN-207ENST00000507162 APH1BQ8WW43 257 aa4.76□□□□□ -1.65
VCAN-207ENST00000507162 FCAMRQ8WWV6 532 aa4.76□□□□□ -1.65
VCAN-207ENST00000507162 GPR146Q96CH1 333 aa4.76□□□□□ -1.65
VCAN-207ENST00000507162 SLC7A6OSQ96CW6 309 aaPredicted RBP4.76□□□□□ -1.65
VCAN-207ENST00000507162 CENPNQ96H22 339 aaPredicted RBP4.76□□□□□ -1.65
VCAN-207ENST00000507162 TSC22D3Q99576 134 aa4.76□□□□□ -1.65
VCAN-207ENST00000507162 GFI1Q99684 422 aa4.76□□□□□ -1.65
VCAN-207ENST00000507162 SLC25A39Q9BZJ4 359 aaPredicted RBP4.76□□□□□ -1.65
VCAN-207ENST00000507162 CRCT1Q9UGL9 99 aa4.76□□□□□ -1.65
VCAN-207ENST00000507162 TRGV2A0A075B6R0 118 aa4.75□□□□□ -1.65
VCAN-207ENST00000507162 TRAV5A0A0B4J249 113 aa4.75□□□□□ -1.65
VCAN-207ENST00000507162 A0A0B4J293 547 aa4.75□□□□□ -1.65
VCAN-207ENST00000507162 IRGMA1A4Y4 181 aa4.75□□□□□ -1.65
VCAN-207ENST00000507162 RBFOX3A6NFN3 312 aa4.75□□□□□ -1.65
VCAN-207ENST00000507162 ERICH4A6NGS2 130 aa4.75□□□□□ -1.65
VCAN-207ENST00000507162 K7EP13 123 aa4.75□□□□□ -1.65
VCAN-207ENST00000507162 EI24O14681 340 aa4.75□□□□□ -1.65
VCAN-207ENST00000507162 DUSP14O95147 198 aaKnown RBP4.75□□□□□ -1.65
VCAN-207ENST00000507162 ALPLP05186 524 aa4.75□□□□□ -1.65
VCAN-207ENST00000507162 CD1AP06126 327 aa4.75□□□□□ -1.65
VCAN-207ENST00000507162 ZNF182P17025 639 aaPredicted RBP4.75□□□□□ -1.65
VCAN-207ENST00000507162 F2RP25116 425 aa4.75□□□□□ -1.65
VCAN-207ENST00000507162 ETV6P41212 452 aa4.75□□□□□ -1.65
VCAN-207ENST00000507162 SUB1P53999 127 aaKnown RBP eCLIP4.75□□□□□ -1.65
VCAN-207ENST00000507162 WNT4P56705 351 aa4.75□□□□□ -1.65
VCAN-207ENST00000507162 ARPC4P59998 168 aa4.75□□□□□ -1.65
VCAN-207ENST00000507162 RHOBP62745 196 aa4.75□□□□□ -1.65
VCAN-207ENST00000507162 CD300CQ08708 224 aa4.75□□□□□ -1.65
VCAN-207ENST00000507162 MSMO1Q15800 293 aa4.75□□□□□ -1.65
VCAN-207ENST00000507162 HES5Q5TA89 166 aa4.75□□□□□ -1.65
VCAN-207ENST00000507162 TMEM17Q86X19 198 aa4.75□□□□□ -1.65
VCAN-207ENST00000507162 CCDC28AQ8IWP9 274 aa4.75□□□□□ -1.65
VCAN-207ENST00000507162 TMEM256Q8N2U0 113 aa4.75□□□□□ -1.65
VCAN-207ENST00000507162 C10orf126Q8N4M7 172 aa4.75□□□□□ -1.65
VCAN-207ENST00000507162 OR51G1Q8NGK1 321 aa4.75□□□□□ -1.65
VCAN-207ENST00000507162 ANXA10Q9UJ72 324 aa4.75□□□□□ -1.65
VCAN-207ENST00000507162 RCL1Q9Y2P8 373 aaKnown RBP4.75□□□□□ -1.65
VCAN-207ENST00000507162 SNURFLB1AK76 121 aa4.74□□□□□ -1.65
VCAN-207ENST00000507162 J3KRW8 73 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms