RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 SCGB1C1Q8TD33 95 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 C7orf33Q8WU49 177 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 FLYWCH2Q96CP2 140 aaKnown RBP1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 GNPNAT1Q96EK6 184 aaPredicted RBP1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 SMIM8Q96KF7 97 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 OR10C1Q96KK4 312 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 CCL19Q99731 98 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 TXN2Q99757 166 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 RNF5Q99942 180 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 CITED1Q99966 193 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 ZNF251Q9BRH9 671 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 RNF126Q9BV68 326 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 GGACTQ9BVM4 153 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 ZNF471Q9BX82 626 aaPredicted RBP1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 TMEM133Q9H2Q1 129 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 PATZ1Q9HBE1 687 aaKnown RBP1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 ENY2Q9NPA8 101 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 KCNIP2Q9NS61 270 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 C19orf12Q9NSK7 152 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 LYRM2Q9NU23 88 aaPredicted RBP1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 MED9Q9NWA0 146 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 SDHAF2Q9NX18 166 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 RPUSD1Q9UJJ7 312 aaKnown RBP1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 PRNDQ9UKY0 176 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 PSG11Q9UQ72 335 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 ZNF257Q9Y2Q1 563 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 LSM5Q9Y4Y9 91 aaKnown RBP1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 INSIG2Q9Y5U4 225 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 KPTNQ9Y664 436 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 FRYQ5TBA9 3013 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 FREM2Q5SZK8 3169 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 NCKAP5O14513 1909 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 PIEZO2Q9H5I5 2752 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 KNTC1P50748 2209 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 BTBD17A6NE02 478 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 CEBPZOSA8MTT3 80 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 KRBOX1C9JBD0 128 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 C17orf112F2Z3M2 114 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 G3V3Q6 166 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 BUB1B-PAK6H3BSN5 160 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 H7C2Y5 167 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 CORTO00230 105 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 CYB5BO43169 146 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 CHST1O43916 411 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 SSSCA1O60232 199 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 RAMP3O60896 148 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 MPDU1O75352 247 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 PITX3O75364 302 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 SCGB2A1O75556 95 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 IFNA10P01566 189 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 MBP02144 154 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 SEC11BP0C7V7 166 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 SAA2P0DJI9 122 aaPredicted RBP1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 CT45A6P0DMU7 189 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 CT45A5P0DMU8 189 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 CT45A7P0DMV0 189 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 CXCL2P19875 107 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 USF1P22415 310 aaPredicted RBP1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 PRTN3P24158 256 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 COL8A2P25067 703 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 LOXP28300 417 aaPredicted RBP1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 BRS3P32247 399 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 MAS1LP35410 378 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 G6PCP35575 357 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 TAGLN2P37802 199 aaKnown RBP1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 SNCAP37840 140 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 HTR2BP41595 481 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 UQCRFS1P47985 274 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 ZNF137PP52743 207 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 UBE2KP61086 200 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 HSPE1P61604 102 aaKnown RBP1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 POLR2GP62487 172 aaKnown RBP eCLIP1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 ERHP84090 104 aaKnown RBP1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 SERF2P84101 59 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 EWSR1Q01844 656 aaKnown RBP eCLIP1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 TNFRSF9Q07011 255 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 SCGB2A2Q13296 93 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 EIF4EBP1Q13541 118 aaPredicted RBP1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 POU2AF1Q16633 256 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 LTC4SQ16873 150 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 VMA21Q3ZAQ7 101 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 SPRNQ5BIV9 151 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 SPANXN5Q5MJ07 72 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 FAM201AQ5SY85 155 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 MINOS1Q5TGZ0 78 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 PRAMEF5Q5TYX0 476 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 UQCC3Q6UW78 93 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 LYPD2Q6UXB3 125 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 DPPA3Q6W0C5 159 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 ZNF833PQ6ZTB9 187 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 S100A7AQ86SG5 101 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 PUSL1Q8N0Z8 303 aaKnown RBP1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 COMMD1Q8N668 190 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 TEX29Q8N6K0 151 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 TMEM252Q8N6L7 170 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 C15orf54Q8N8G6 183 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 ZNF709Q8N972 641 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 ZNF439Q8NDP4 499 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 LY6G5BQ8NDX9 201 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 LFNGQ8NES3 379 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms