RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 TMEM229BQ8NBD8 167 aa2.2□□□□□ -2.06
TCOF1-208ENST00000506063 UBAC2Q8NBM4 344 aa2.2□□□□□ -2.06
TCOF1-208ENST00000506063 OR4C16Q8NGL9 310 aa2.2□□□□□ -2.06
TCOF1-208ENST00000506063 OR13C8Q8NGS7 320 aa2.2□□□□□ -2.06
TCOF1-208ENST00000506063 DYNC2LI1Q8TCX1 351 aa2.2□□□□□ -2.06
TCOF1-208ENST00000506063 DEDD2Q8WXF8 326 aa2.2□□□□□ -2.06
TCOF1-208ENST00000506063 MRGPRFQ96AM1 343 aa2.2□□□□□ -2.06
TCOF1-208ENST00000506063 DGCR14Q96DF8 476 aaKnown RBP2.2□□□□□ -2.06
TCOF1-208ENST00000506063 NAA60Q9H7X0 242 aa2.2□□□□□ -2.06
TCOF1-208ENST00000506063 DAZ1Q9NQZ3 744 aaKnown RBP2.2□□□□□ -2.06
TCOF1-208ENST00000506063 NDUFA13Q9P0J0 144 aa2.2□□□□□ -2.06
TCOF1-208ENST00000506063 KLK11Q9UBX7 282 aa2.2□□□□□ -2.06
TCOF1-208ENST00000506063 UFC1Q9Y3C8 167 aa2.2□□□□□ -2.06
TCOF1-208ENST00000506063 YTHDF2Q9Y5A9 579 aaKnown RBP2.2□□□□□ -2.06
TCOF1-208ENST00000506063 OR51B2Q9Y5P1 312 aa2.2□□□□□ -2.06
TCOF1-208ENST00000506063 PUS1Q9Y606 427 aaKnown RBP eCLIP2.2□□□□□ -2.06
TCOF1-208ENST00000506063 MUC17Q685J3 4493 aa2.2□□□□□ -2.06
TCOF1-208ENST00000506063 IGHV3OR16-8A0A075B7F1 116 aa2.19□□□□□ -2.06
TCOF1-208ENST00000506063 TRBV7-1A0A0A6YYK4 115 aa2.19□□□□□ -2.06
TCOF1-208ENST00000506063 C3orf85A0A1B0GTC6 90 aa2.19□□□□□ -2.06
TCOF1-208ENST00000506063 DUXBA0A1W2PPF3 345 aa2.19□□□□□ -2.06
TCOF1-208ENST00000506063 IGLC7A0M8Q6 106 aa2.19□□□□□ -2.06
TCOF1-208ENST00000506063 ANKRD20A5PA0PJZ0 165 aa2.19□□□□□ -2.06
TCOF1-208ENST00000506063 NAP1L6A6NFF2 107 aa2.19□□□□□ -2.06
TCOF1-208ENST00000506063 SMIM9A6NGZ8 99 aa2.19□□□□□ -2.06
TCOF1-208ENST00000506063 HMX3A6NHT5 357 aa2.19□□□□□ -2.06
TCOF1-208ENST00000506063 TEX22C9J3V5 150 aa2.19□□□□□ -2.06
TCOF1-208ENST00000506063 WRBO00258 174 aa2.19□□□□□ -2.06
TCOF1-208ENST00000506063 UPK2O00526 184 aa2.19□□□□□ -2.06
TCOF1-208ENST00000506063 NUPL2O15504 423 aaKnown RBP2.19□□□□□ -2.06
TCOF1-208ENST00000506063 ZNF207O43670 478 aaKnown RBP2.19□□□□□ -2.06
TCOF1-208ENST00000506063 GSTZ1O43708 216 aaPredicted RBP2.19□□□□□ -2.06
TCOF1-208ENST00000506063 PGLYRP1O75594 196 aaPredicted RBP2.19□□□□□ -2.06
TCOF1-208ENST00000506063 DFFBO76075 338 aa2.19□□□□□ -2.06
TCOF1-208ENST00000506063 IGLV2-14P01704 120 aa2.19□□□□□ -2.06
TCOF1-208ENST00000506063 IGLV2-11P01706 119 aa2.19□□□□□ -2.06
TCOF1-208ENST00000506063 CLEC3BP05452 202 aa2.19□□□□□ -2.06
TCOF1-208ENST00000506063 CRYGCP07315 174 aa2.19□□□□□ -2.06
TCOF1-208ENST00000506063 OR5AC1P0C628 307 aa2.19□□□□□ -2.06
TCOF1-208ENST00000506063 ZNF735P0CB33 412 aa2.19□□□□□ -2.06
TCOF1-208ENST00000506063 SULT1A3P0DMM9 295 aa2.19□□□□□ -2.06
TCOF1-208ENST00000506063 SULT1A4P0DMN0 295 aa2.19□□□□□ -2.06
TCOF1-208ENST00000506063 OR13C7P0DN81 318 aa2.19□□□□□ -2.06
TCOF1-208ENST00000506063 AREGP15514 252 aa2.19□□□□□ -2.06
TCOF1-208ENST00000506063 PI3P19957 117 aa2.19□□□□□ -2.06
TCOF1-208ENST00000506063 VAMP1P23763 118 aa2.19□□□□□ -2.06
TCOF1-208ENST00000506063 NUP62P37198 522 aaPredicted RBP2.19□□□□□ -2.06
TCOF1-208ENST00000506063 SNCAP37840 140 aa2.19□□□□□ -2.06
TCOF1-208ENST00000506063 OPRK1P41145 380 aa2.19□□□□□ -2.06
TCOF1-208ENST00000506063 LPAR6P43657 344 aa2.19□□□□□ -2.06
TCOF1-208ENST00000506063 SUB1P53999 127 aaKnown RBP eCLIP2.19□□□□□ -2.06
TCOF1-208ENST00000506063 ERHP84090 104 aaKnown RBP2.19□□□□□ -2.06
TCOF1-208ENST00000506063 PRCDQ00LT1 54 aa2.19□□□□□ -2.06
TCOF1-208ENST00000506063 DHODHQ02127 395 aa2.19□□□□□ -2.06
TCOF1-208ENST00000506063 RELQ04864 619 aaPredicted RBP2.19□□□□□ -2.06
TCOF1-208ENST00000506063 EIF4EBP1Q13541 118 aaPredicted RBP2.19□□□□□ -2.06
TCOF1-208ENST00000506063 WFDC2Q14508 124 aa2.19□□□□□ -2.06
TCOF1-208ENST00000506063 LINC01620Q4KN68 170 aa2.19□□□□□ -2.06
TCOF1-208ENST00000506063 TMEM268Q5VZI3 342 aa2.19□□□□□ -2.06
TCOF1-208ENST00000506063 SPSB3Q6PJ21 355 aa2.19□□□□□ -2.06
TCOF1-208ENST00000506063 PLET1Q6UQ28 207 aa2.19□□□□□ -2.06
TCOF1-208ENST00000506063 DHRS11Q6UWP2 260 aa2.19□□□□□ -2.06
TCOF1-208ENST00000506063 TMED4Q7Z7H5 227 aa2.19□□□□□ -2.06
TCOF1-208ENST00000506063 NOXA1Q86UR1 476 aa2.19□□□□□ -2.06
TCOF1-208ENST00000506063 LHFPL1Q86WI0 220 aa2.19□□□□□ -2.06
TCOF1-208ENST00000506063 OR51S1Q8NGJ8 323 aa2.19□□□□□ -2.06
TCOF1-208ENST00000506063 ZNF502Q8TBZ5 544 aa2.19□□□□□ -2.06
TCOF1-208ENST00000506063 MARCH1Q8TCQ1 289 aa2.19□□□□□ -2.06
TCOF1-208ENST00000506063 RBPMSQ93062 196 aaKnown RBP2.19□□□□□ -2.06
TCOF1-208ENST00000506063 TRIM63Q969Q1 353 aa2.19□□□□□ -2.06
TCOF1-208ENST00000506063 PINX1Q96BK5 328 aaKnown RBP2.19□□□□□ -2.06
TCOF1-208ENST00000506063 MISP3Q96FF7 219 aa2.19□□□□□ -2.06
TCOF1-208ENST00000506063 BSCL2Q96G97 398 aaPredicted RBP2.19□□□□□ -2.06
TCOF1-208ENST00000506063 NARS2Q96I59 477 aaKnown RBP2.19□□□□□ -2.06
TCOF1-208ENST00000506063 GPHA2Q96T91 129 aa2.19□□□□□ -2.06
TCOF1-208ENST00000506063 C7orf50Q9BRJ6 194 aaKnown RBP2.19□□□□□ -2.06
TCOF1-208ENST00000506063 GINS3Q9BRX5 216 aa2.19□□□□□ -2.06
TCOF1-208ENST00000506063 SLIRPQ9GZT3 109 aaKnown RBP2.19□□□□□ -2.06
TCOF1-208ENST00000506063 MIXL1Q9H2W2 232 aa2.19□□□□□ -2.06
TCOF1-208ENST00000506063 TMEM231Q9H6L2 316 aa2.19□□□□□ -2.06
TCOF1-208ENST00000506063 C21orf62Q9NYP8 219 aa2.19□□□□□ -2.06
TCOF1-208ENST00000506063 XCL2Q9UBD3 114 aa2.19□□□□□ -2.06
TCOF1-208ENST00000506063 SMPXQ9UHP9 88 aa2.19□□□□□ -2.06
TCOF1-208ENST00000506063 KCNIP3Q9Y2W7 256 aa2.19□□□□□ -2.06
TCOF1-208ENST00000506063 F11RQ9Y624 299 aaKnown RBP2.19□□□□□ -2.06
TCOF1-208ENST00000506063 USH2AO75445 5202 aa2.18□□□□□ -2.06
TCOF1-208ENST00000506063 SYNE2Q8WXH0 6885 aaKnown RBP2.18□□□□□ -2.06
TCOF1-208ENST00000506063 IGKV3-7A0A075B6H7 116 aa2.18□□□□□ -2.06
TCOF1-208ENST00000506063 IGLV11-55A0A075B6I3 123 aa2.18□□□□□ -2.06
TCOF1-208ENST00000506063 A0A0J9YXV3 536 aa2.18□□□□□ -2.06
TCOF1-208ENST00000506063 PLAC8L1A1L4L8 177 aa2.18□□□□□ -2.06
TCOF1-208ENST00000506063 OR2T8A6NH00 312 aa2.18□□□□□ -2.06
TCOF1-208ENST00000506063 CRYM-AS1A6NIL9 109 aa2.18□□□□□ -2.06
TCOF1-208ENST00000506063 CEBPZOSA8MTT3 80 aa2.18□□□□□ -2.06
TCOF1-208ENST00000506063 E7EUB6 86 aa2.18□□□□□ -2.06
TCOF1-208ENST00000506063 K7EMT4 169 aa2.18□□□□□ -2.06
TCOF1-208ENST00000506063 CTDSP2O14595 271 aa2.18□□□□□ -2.06
TCOF1-208ENST00000506063 ST8SIA3O43173 380 aa2.18□□□□□ -2.06
TCOF1-208ENST00000506063 GNG7O60262 68 aa2.18□□□□□ -2.06
TCOF1-208ENST00000506063 FABP1P07148 127 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 230 ms