RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 ZNF709Q8N972 641 aa4.79□□□□□ -1.64
VCAN-206ENST00000505615 OR1L8Q8NGR8 309 aa4.79□□□□□ -1.64
VCAN-206ENST00000505615 LSM10Q969L4 123 aaKnown RBP4.79□□□□□ -1.64
VCAN-206ENST00000505615 SLC25A46Q96AG3 418 aa4.79□□□□□ -1.64
VCAN-206ENST00000505615 MAGT1Q9H0U3 335 aa4.79□□□□□ -1.64
VCAN-206ENST00000505615 DNAJC4Q9NNZ3 241 aa4.79□□□□□ -1.64
VCAN-206ENST00000505615 TNXBP22105 4242 aa4.79□□□□□ -1.64
VCAN-206ENST00000505615 TRGV11A0A075B6L2 103 aa4.78□□□□□ -1.64
VCAN-206ENST00000505615 DIRC3C9JPN6 131 aa4.78□□□□□ -1.64
VCAN-206ENST00000505615 FAM90A26D6RGX4 464 aa4.78□□□□□ -1.64
VCAN-206ENST00000505615 ZNF701M0R085 212 aaPredicted RBP4.78□□□□□ -1.64
VCAN-206ENST00000505615 MT-CO2P00403 227 aa4.78□□□□□ -1.64
VCAN-206ENST00000505615 NQO2P16083 231 aa4.78□□□□□ -1.64
VCAN-206ENST00000505615 MYL12AP19105 171 aa4.78□□□□□ -1.64
VCAN-206ENST00000505615 CRYBB3P26998 211 aa4.78□□□□□ -1.64
VCAN-206ENST00000505615 HTR2BP41595 481 aa4.78□□□□□ -1.64
VCAN-206ENST00000505615 PPT1P50897 306 aa4.78□□□□□ -1.64
VCAN-206ENST00000505615 TAS2R31P59538 309 aa4.78□□□□□ -1.64
VCAN-206ENST00000505615 DEFB1P60022 68 aa4.78□□□□□ -1.64
VCAN-206ENST00000505615 ERVFC1-1P60608 527 aa4.78□□□□□ -1.64
VCAN-206ENST00000505615 MRPS15P82914 257 aaKnown RBP4.78□□□□□ -1.64
VCAN-206ENST00000505615 DHRS2Q13268 280 aa4.78□□□□□ -1.64
VCAN-206ENST00000505615 ACSM3Q53FZ2 586 aa4.78□□□□□ -1.64
VCAN-206ENST00000505615 GDF5OSQ5U4N7 250 aa4.78□□□□□ -1.64
VCAN-206ENST00000505615 ZNF600Q6ZNG1 722 aa4.78□□□□□ -1.64
VCAN-206ENST00000505615 SPAG16Q8N0X2 631 aa4.78□□□□□ -1.64
VCAN-206ENST00000505615 OR1P1Q8NH06 330 aa4.78□□□□□ -1.64
VCAN-206ENST00000505615 DEFB104AQ8WTQ1 72 aa4.78□□□□□ -1.64
VCAN-206ENST00000505615 PINX1Q96BK5 328 aaKnown RBP4.78□□□□□ -1.64
VCAN-206ENST00000505615 RAB3CQ96E17 227 aa4.78□□□□□ -1.64
VCAN-206ENST00000505615 TMEM70Q9BUB7 260 aa4.78□□□□□ -1.64
VCAN-206ENST00000505615 TREM1Q9NP99 234 aa4.78□□□□□ -1.64
VCAN-206ENST00000505615 ELF5Q9UKW6 265 aaPredicted RBP4.78□□□□□ -1.64
VCAN-206ENST00000505615 ORC6Q9Y5N6 252 aa4.78□□□□□ -1.64
VCAN-206ENST00000505615 A0A087WTM6 91 aa4.77□□□□□ -1.65
VCAN-206ENST00000505615 TMEM272A0A1B0GTI8 110 aa4.77□□□□□ -1.65
VCAN-206ENST00000505615 A0A1W2PS18 150 aa4.77□□□□□ -1.65
VCAN-206ENST00000505615 KRTAP23-1A1A580 65 aa4.77□□□□□ -1.65
VCAN-206ENST00000505615 F5H768 121 aa4.77□□□□□ -1.65
VCAN-206ENST00000505615 TNFSF12O43508 249 aa4.77□□□□□ -1.65
VCAN-206ENST00000505615 GNG7O60262 68 aa4.77□□□□□ -1.65
VCAN-206ENST00000505615 NXPH3O95157 252 aa4.77□□□□□ -1.65
VCAN-206ENST00000505615 IFNA5P01569 189 aa4.77□□□□□ -1.65
VCAN-206ENST00000505615 HBE1P02100 147 aa4.77□□□□□ -1.65
VCAN-206ENST00000505615 HIST1H1DP16402 221 aaKnown RBP4.77□□□□□ -1.65
VCAN-206ENST00000505615 CLDN12P56749 244 aa4.77□□□□□ -1.65
VCAN-206ENST00000505615 FGL1Q08830 312 aa4.77□□□□□ -1.65
VCAN-206ENST00000505615 CLINT1Q14677 625 aa4.77□□□□□ -1.65
VCAN-206ENST00000505615 DNAL1Q4LDG9 190 aa4.77□□□□□ -1.65
VCAN-206ENST00000505615 GGNBP1Q5YKI7 109 aa4.77□□□□□ -1.65
VCAN-206ENST00000505615 UHRF2Q96PU4 802 aa4.77□□□□□ -1.65
VCAN-206ENST00000505615 AIFM2Q9BRQ8 373 aa4.77□□□□□ -1.65
VCAN-206ENST00000505615 HINT2Q9BX68 163 aa4.77□□□□□ -1.65
VCAN-206ENST00000505615 MRPS16Q9Y3D3 137 aaKnown RBP4.77□□□□□ -1.65
VCAN-206ENST00000505615 TRAV6A0A075B6T7 132 aa4.76□□□□□ -1.65
VCAN-206ENST00000505615 PLAC8L1A1L4L8 177 aa4.76□□□□□ -1.65
VCAN-206ENST00000505615 LYRM9A8MSI8 78 aa4.76□□□□□ -1.65
VCAN-206ENST00000505615 SULT1C2O00338 296 aa4.76□□□□□ -1.65
VCAN-206ENST00000505615 GYG2O15488 501 aa4.76□□□□□ -1.65
VCAN-206ENST00000505615 DENRO43583 198 aaKnown RBP4.76□□□□□ -1.65
VCAN-206ENST00000505615 HPRT1P00492 218 aa4.76□□□□□ -1.65
VCAN-206ENST00000505615 OXTP01178 125 aa4.76□□□□□ -1.65
VCAN-206ENST00000505615 UCHL1P09936 223 aa4.76□□□□□ -1.65
VCAN-206ENST00000505615 P0C879 139 aa4.76□□□□□ -1.65
VCAN-206ENST00000505615 STAG3L2P0CL84 134 aa4.76□□□□□ -1.65
VCAN-206ENST00000505615 NPPCP23582 126 aa4.76□□□□□ -1.65
VCAN-206ENST00000505615 DTYMKP23919 212 aa4.76□□□□□ -1.65
VCAN-206ENST00000505615 KRTAP10-4P60372 401 aaPredicted RBP4.76□□□□□ -1.65
VCAN-206ENST00000505615 MSMO1Q15800 293 aa4.76□□□□□ -1.65
VCAN-206ENST00000505615 RAB11BQ15907 218 aa4.76□□□□□ -1.65
VCAN-206ENST00000505615 ESRGQ1W209 222 aa4.76□□□□□ -1.65
VCAN-206ENST00000505615 RRN3P1Q2M238 152 aa4.76□□□□□ -1.65
VCAN-206ENST00000505615 FAM3DQ96BQ1 224 aa4.76□□□□□ -1.65
VCAN-206ENST00000505615 SLC35B3Q9H1N7 401 aa4.76□□□□□ -1.65
VCAN-206ENST00000505615 FNDC4Q9H6D8 234 aaPredicted RBP4.76□□□□□ -1.65
VCAN-206ENST00000505615 PLGRKTQ9HBL7 147 aa4.76□□□□□ -1.65
VCAN-206ENST00000505615 CCL28Q9NRJ3 127 aa4.76□□□□□ -1.65
VCAN-206ENST00000505615 NSG2Q9Y328 171 aa4.76□□□□□ -1.65
VCAN-206ENST00000505615 OR51B2Q9Y5P1 312 aa4.76□□□□□ -1.65
VCAN-206ENST00000505615 TRAV26-1A0A087WT03 109 aa4.75□□□□□ -1.65
VCAN-206ENST00000505615 LOC100130705A0A1B0GUX0 176 aa4.75□□□□□ -1.65
VCAN-206ENST00000505615 IRGMA1A4Y4 181 aa4.75□□□□□ -1.65
VCAN-206ENST00000505615 EFCAB10A6NFE3 127 aa4.75□□□□□ -1.65
VCAN-206ENST00000505615 PRSS46E5RG02 174 aa4.75□□□□□ -1.65
VCAN-206ENST00000505615 TMEM50AO95807 157 aa4.75□□□□□ -1.65
VCAN-206ENST00000505615 IGKV3-20P01619 116 aa4.75□□□□□ -1.65
VCAN-206ENST00000505615 PRM2P04554 102 aa4.75□□□□□ -1.65
VCAN-206ENST00000505615 DEFB130BP0DP73 79 aa4.75□□□□□ -1.65
VCAN-206ENST00000505615 DEFB130AP0DP74 79 aa4.75□□□□□ -1.65
VCAN-206ENST00000505615 UCP1P25874 307 aa4.75□□□□□ -1.65
VCAN-206ENST00000505615 NKX2-1P43699 371 aaPredicted RBP4.75□□□□□ -1.65
VCAN-206ENST00000505615 SNRPD3P62318 126 aaKnown RBP4.75□□□□□ -1.65
VCAN-206ENST00000505615 GNGT1P63211 74 aa4.75□□□□□ -1.65
VCAN-206ENST00000505615 UBE2V1Q13404 147 aa4.75□□□□□ -1.65
VCAN-206ENST00000505615 HSD17B12Q53GQ0 312 aa4.75□□□□□ -1.65
VCAN-206ENST00000505615 RNASE12Q5GAN4 147 aaKnown RBP4.75□□□□□ -1.65
VCAN-206ENST00000505615 ZNF114Q8NC26 417 aa4.75□□□□□ -1.65
VCAN-206ENST00000505615 DMBX1Q8NFW5 382 aa4.75□□□□□ -1.65
VCAN-206ENST00000505615 OR10R2Q8NGX6 335 aa4.75□□□□□ -1.65
VCAN-206ENST00000505615 TMEM80Q96HE8 168 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms