RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 NPBQ8NG41 125 aa3.78□□□□□ -1.8
DEPDC1B-203ENST00000505017 OR2G3Q8NGZ4 309 aa3.78□□□□□ -1.8
DEPDC1B-203ENST00000505017 OR2T10Q8NGZ9 312 aa3.78□□□□□ -1.8
DEPDC1B-203ENST00000505017 OR4C12Q96R67 309 aa3.78□□□□□ -1.8
DEPDC1B-203ENST00000505017 SMIM3Q9BZL3 60 aa3.78□□□□□ -1.8
DEPDC1B-203ENST00000505017 WFDC1Q9HC57 220 aa3.78□□□□□ -1.8
DEPDC1B-203ENST00000505017 PARP11Q9NR21 331 aa3.78□□□□□ -1.8
DEPDC1B-203ENST00000505017 NDUFA4L2Q9NRX3 87 aa3.78□□□□□ -1.8
DEPDC1B-203ENST00000505017 UQCC1Q9NVA1 299 aa3.78□□□□□ -1.8
DEPDC1B-203ENST00000505017 ZNRD1Q9P1U0 126 aa3.78□□□□□ -1.8
DEPDC1B-203ENST00000505017 NAV2Q8IVL1 2488 aa3.78□□□□□ -1.8
DEPDC1B-203ENST00000505017 A0A096LNT2 108 aa3.77□□□□□ -1.81
DEPDC1B-203ENST00000505017 BTBD17A6NE02 478 aa3.77□□□□□ -1.81
DEPDC1B-203ENST00000505017 C17orf112F2Z3M2 114 aa3.77□□□□□ -1.81
DEPDC1B-203ENST00000505017 H3BP45 60 aa3.77□□□□□ -1.81
DEPDC1B-203ENST00000505017 TEX46H3BTG2 121 aa3.77□□□□□ -1.81
DEPDC1B-203ENST00000505017 CORTO00230 105 aa3.77□□□□□ -1.81
DEPDC1B-203ENST00000505017 NPFFO15130 113 aa3.77□□□□□ -1.81
DEPDC1B-203ENST00000505017 ATP6V0E1O15342 81 aa3.77□□□□□ -1.81
DEPDC1B-203ENST00000505017 NBR2O15453 112 aa3.77□□□□□ -1.81
DEPDC1B-203ENST00000505017 MBP02144 154 aa3.77□□□□□ -1.81
DEPDC1B-203ENST00000505017 MDKP21741 143 aaPredicted RBP3.77□□□□□ -1.81
DEPDC1B-203ENST00000505017 ATP6V0CP27449 155 aa3.77□□□□□ -1.81
DEPDC1B-203ENST00000505017 GPX4P36969 197 aaPredicted RBP3.77□□□□□ -1.81
DEPDC1B-203ENST00000505017 SNCAP37840 140 aa3.77□□□□□ -1.81
DEPDC1B-203ENST00000505017 RPL27AP46776 148 aaKnown RBP3.77□□□□□ -1.81
DEPDC1B-203ENST00000505017 TMEM267Q0VDI3 215 aaPredicted RBP3.77□□□□□ -1.81
DEPDC1B-203ENST00000505017 PNRC1Q12796 327 aaPredicted RBP3.77□□□□□ -1.81
DEPDC1B-203ENST00000505017 KLRD1Q13241 179 aa3.77□□□□□ -1.81
DEPDC1B-203ENST00000505017 RAB31Q13636 194 aa3.77□□□□□ -1.81
DEPDC1B-203ENST00000505017 DIAPH2-AS1Q14236 149 aa3.77□□□□□ -1.81
DEPDC1B-203ENST00000505017 AANATQ16613 207 aa3.77□□□□□ -1.81
DEPDC1B-203ENST00000505017 AKR1C8PQ5T2L2 129 aa3.77□□□□□ -1.81
DEPDC1B-203ENST00000505017 PVRIGQ6DKI7 326 aa3.77□□□□□ -1.81
DEPDC1B-203ENST00000505017 UQCC3Q6UW78 93 aa3.77□□□□□ -1.81
DEPDC1B-203ENST00000505017 IL34Q6ZMJ4 242 aa3.77□□□□□ -1.81
DEPDC1B-203ENST00000505017 PPP1R27Q86WC6 154 aa3.77□□□□□ -1.81
DEPDC1B-203ENST00000505017 TEX29Q8N6K0 151 aa3.77□□□□□ -1.81
DEPDC1B-203ENST00000505017 Q8N6K4 173 aa3.77□□□□□ -1.81
DEPDC1B-203ENST00000505017 ZNF709Q8N972 641 aa3.77□□□□□ -1.81
DEPDC1B-203ENST00000505017 OR1L6Q8NGR2 347 aa3.77□□□□□ -1.81
DEPDC1B-203ENST00000505017 LYPD6BQ8NI32 183 aa3.77□□□□□ -1.81
DEPDC1B-203ENST00000505017 RNASEH2CQ8TDP1 164 aaKnown RBP3.77□□□□□ -1.81
DEPDC1B-203ENST00000505017 CACNG8Q8WXS5 425 aa3.77□□□□□ -1.81
DEPDC1B-203ENST00000505017 BSCL2Q96G97 398 aaPredicted RBP3.77□□□□□ -1.81
DEPDC1B-203ENST00000505017 WDR61Q9GZS3 305 aaKnown RBP3.77□□□□□ -1.81
DEPDC1B-203ENST00000505017 ZNF430Q9H8G1 570 aaPredicted RBP3.77□□□□□ -1.81
DEPDC1B-203ENST00000505017 MMP26Q9NRE1 261 aa3.77□□□□□ -1.81
DEPDC1B-203ENST00000505017 PRR34Q9NV39 138 aa3.77□□□□□ -1.81
DEPDC1B-203ENST00000505017 SIGLEC9Q9Y336 463 aa3.77□□□□□ -1.81
DEPDC1B-203ENST00000505017 FBXO7Q9Y3I1 522 aa3.77□□□□□ -1.81
DEPDC1B-203ENST00000505017 PRRC2AP48634 2157 aaKnown RBP3.77□□□□□ -1.81
DEPDC1B-203ENST00000505017 DCHS2Q6V1P9 2916 aa3.77□□□□□ -1.81
DEPDC1B-203ENST00000505017 PLXNB1O43157 2135 aa3.76□□□□□ -1.81
DEPDC1B-203ENST00000505017 IGHV3-72A0A0B4J1Y9 119 aa3.76□□□□□ -1.81
DEPDC1B-203ENST00000505017 TRAV1-1A0A0B4J248 108 aa3.76□□□□□ -1.81
DEPDC1B-203ENST00000505017 IGHV1-69DA0A0B4J2H0 117 aa3.76□□□□□ -1.81
DEPDC1B-203ENST00000505017 CENPVL3A0A0U1RRI6 287 aa3.76□□□□□ -1.81
DEPDC1B-203ENST00000505017 ZNF705EA8MWA4 302 aaPredicted RBP3.76□□□□□ -1.81
DEPDC1B-203ENST00000505017 PRSS46E5RG02 174 aa3.76□□□□□ -1.81
DEPDC1B-203ENST00000505017 CYB5BO43169 146 aa3.76□□□□□ -1.81
DEPDC1B-203ENST00000505017 NDUFS6O75380 124 aaKnown RBP3.76□□□□□ -1.81
DEPDC1B-203ENST00000505017 IGKV1D-33P01593 117 aa3.76□□□□□ -1.81
DEPDC1B-203ENST00000505017 IGKV1-33P01594 117 aa3.76□□□□□ -1.81
DEPDC1B-203ENST00000505017 IGHV1-69P01742 117 aa3.76□□□□□ -1.81
DEPDC1B-203ENST00000505017 HBE1P02100 147 aa3.76□□□□□ -1.81
DEPDC1B-203ENST00000505017 PRH1P02810 166 aa3.76□□□□□ -1.81
DEPDC1B-203ENST00000505017 IFNA4P05014 189 aa3.76□□□□□ -1.81
DEPDC1B-203ENST00000505017 CLEC3BP05452 202 aa3.76□□□□□ -1.81
DEPDC1B-203ENST00000505017 RNASE2P10153 161 aaKnown RBP3.76□□□□□ -1.81
DEPDC1B-203ENST00000505017 SAA4P35542 130 aa3.76□□□□□ -1.81
DEPDC1B-203ENST00000505017 CAMLGP49069 296 aa3.76□□□□□ -1.81
DEPDC1B-203ENST00000505017 KRTAP10-8P60410 259 aa3.76□□□□□ -1.81
DEPDC1B-203ENST00000505017 RAB2AP61019 212 aa3.76□□□□□ -1.81
DEPDC1B-203ENST00000505017 GAGE2BQ13066 116 aa3.76□□□□□ -1.81
DEPDC1B-203ENST00000505017 PLGLAQ15195 96 aa3.76□□□□□ -1.81
DEPDC1B-203ENST00000505017 MMDQ15546 238 aa3.76□□□□□ -1.81
DEPDC1B-203ENST00000505017 SSX2Q16385 188 aa3.76□□□□□ -1.81
DEPDC1B-203ENST00000505017 C5orf64Q2M2E5 130 aa3.76□□□□□ -1.81
DEPDC1B-203ENST00000505017 TMEM95Q3KNT9 176 aa3.76□□□□□ -1.81
DEPDC1B-203ENST00000505017 GAGE2EQ4V326 116 aa3.76□□□□□ -1.81
DEPDC1B-203ENST00000505017 FAM74A1Q5RGS3 127 aa3.76□□□□□ -1.81
DEPDC1B-203ENST00000505017 LDLRAD2Q5SZI1 272 aa3.76□□□□□ -1.81
DEPDC1B-203ENST00000505017 OR8G2PQ6IF36 304 aa3.76□□□□□ -1.81
DEPDC1B-203ENST00000505017 ETFRF1Q6IPR1 90 aa3.76□□□□□ -1.81
DEPDC1B-203ENST00000505017 GAGE2AQ6NT46 116 aa3.76□□□□□ -1.81
DEPDC1B-203ENST00000505017 ZNF343Q6P1L6 599 aa3.76□□□□□ -1.81
DEPDC1B-203ENST00000505017 LHFPL4Q7Z7J7 247 aa3.76□□□□□ -1.81
DEPDC1B-203ENST00000505017 COMMD7Q86VX2 200 aa3.76□□□□□ -1.81
DEPDC1B-203ENST00000505017 SLC7A5P1Q8MH63 180 aa3.76□□□□□ -1.81
DEPDC1B-203ENST00000505017 HSD17B11Q8NBQ5 300 aa3.76□□□□□ -1.81
DEPDC1B-203ENST00000505017 MARC2Q969Z3 335 aa3.76□□□□□ -1.81
DEPDC1B-203ENST00000505017 FAM210AQ96ND0 272 aa3.76□□□□□ -1.81
DEPDC1B-203ENST00000505017 HINT2Q9BX68 163 aa3.76□□□□□ -1.81
DEPDC1B-203ENST00000505017 SMDT1Q9H4I9 107 aa3.76□□□□□ -1.81
DEPDC1B-203ENST00000505017 NPVFQ9HCQ7 196 aa3.76□□□□□ -1.81
DEPDC1B-203ENST00000505017 METTL1Q9UBP6 276 aaKnown RBP3.76□□□□□ -1.81
DEPDC1B-203ENST00000505017 GAGE2DQ9UEU5 116 aa3.76□□□□□ -1.81
DEPDC1B-203ENST00000505017 WDR83OSQ9Y284 106 aa3.76□□□□□ -1.81
DEPDC1B-203ENST00000505017 HILPDAQ9Y5L2 63 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms