RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 TCTEX1D4Q5JR98 221 aa8.03□□□□□ -1.12
TPM3-217ENST00000504663 FAM122CQ6P4D5 195 aa8.03□□□□□ -1.12
TPM3-217ENST00000504663 ZNF329Q86UD4 541 aa8.03□□□□□ -1.12
TPM3-217ENST00000504663 OR10G4Q8NGN3 311 aa8.03□□□□□ -1.12
TPM3-217ENST00000504663 OR10G9Q8NGN4 311 aa8.03□□□□□ -1.12
TPM3-217ENST00000504663 OR10G7Q8NGN6 311 aa8.03□□□□□ -1.12
TPM3-217ENST00000504663 ZNF503Q96F45 646 aa8.03□□□□□ -1.12
TPM3-217ENST00000504663 ATP6V0BQ99437 205 aa8.03□□□□□ -1.12
TPM3-217ENST00000504663 TXN2Q99757 166 aa8.03□□□□□ -1.12
TPM3-217ENST00000504663 C16orf95Q9H693 158 aa8.03□□□□□ -1.12
TPM3-217ENST00000504663 SEPSECSQ9HD40 501 aaKnown RBP8.03□□□□□ -1.12
TPM3-217ENST00000504663 KCNIP2Q9NS61 270 aa8.03□□□□□ -1.12
TPM3-217ENST00000504663 THYN1Q9P016 225 aa8.03□□□□□ -1.12
TPM3-217ENST00000504663 CTXND1A0A1B0GTU2 59 aa8.02□□□□□ -1.13
TPM3-217ENST00000504663 OR2T8A6NH00 312 aa8.02□□□□□ -1.13
TPM3-217ENST00000504663 OR2C1O95371 312 aa8.02□□□□□ -1.13
TPM3-217ENST00000504663 MBP02144 154 aa8.02□□□□□ -1.13
TPM3-217ENST00000504663 STAG3L2P0CL84 134 aa8.02□□□□□ -1.13
TPM3-217ENST00000504663 STAG3L3P0CL85 134 aa8.02□□□□□ -1.13
TPM3-217ENST00000504663 GPR183P32249 361 aa8.02□□□□□ -1.13
TPM3-217ENST00000504663 RAB9AP51151 201 aa8.02□□□□□ -1.13
TPM3-217ENST00000504663 TPPP2P59282 170 aa8.02□□□□□ -1.13
TPM3-217ENST00000504663 YPEL3P61236 119 aaPredicted RBP8.02□□□□□ -1.13
TPM3-217ENST00000504663 SELENOTP62341 195 aa8.02□□□□□ -1.13
TPM3-217ENST00000504663 BLOC1S1P78537 153 aa8.02□□□□□ -1.13
TPM3-217ENST00000504663 SRSF3P84103 164 aaKnown RBP8.02□□□□□ -1.13
TPM3-217ENST00000504663 SCGB2A2Q13296 93 aa8.02□□□□□ -1.13
TPM3-217ENST00000504663 ACOT6Q3I5F7 207 aaPredicted RBP8.02□□□□□ -1.13
TPM3-217ENST00000504663 RBMS3Q6XE24 437 aaKnown RBP8.02□□□□□ -1.13
TPM3-217ENST00000504663 MIR17HGQ75NE6 70 aa8.02□□□□□ -1.13
TPM3-217ENST00000504663 ZNF491Q8N8L2 437 aa8.02□□□□□ -1.13
TPM3-217ENST00000504663 ZNF709Q8N972 641 aa8.02□□□□□ -1.13
TPM3-217ENST00000504663 ZNF418Q8TF45 676 aaPredicted RBP8.02□□□□□ -1.13
TPM3-217ENST00000504663 RAB24Q969Q5 203 aa8.02□□□□□ -1.13
TPM3-217ENST00000504663 EEF1AKMT3Q96AZ1 226 aa8.02□□□□□ -1.13
TPM3-217ENST00000504663 FAM167A-AS1Q96KT0 104 aa8.02□□□□□ -1.13
TPM3-217ENST00000504663 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.01□□□□□ -1.13
TPM3-217ENST00000504663 CLPSL1A2RUU4 121 aa8.01□□□□□ -1.13
TPM3-217ENST00000504663 MAP1LC3B2A6NCE7 125 aa8.01□□□□□ -1.13
TPM3-217ENST00000504663 CYB5BO43169 146 aa8.01□□□□□ -1.13
TPM3-217ENST00000504663 TGOLN2O43493 480 aa8.01□□□□□ -1.13
TPM3-217ENST00000504663 NPBWR1P48145 328 aa8.01□□□□□ -1.13
TPM3-217ENST00000504663 CDC34P49427 236 aaPredicted RBP8.01□□□□□ -1.13
TPM3-217ENST00000504663 RAB14P61106 215 aa8.01□□□□□ -1.13
TPM3-217ENST00000504663 SRSF2Q01130 221 aaKnown RBP8.01□□□□□ -1.13
TPM3-217ENST00000504663 ZNF616Q08AN1 781 aa8.01□□□□□ -1.13
TPM3-217ENST00000504663 FOXE3Q13461 319 aa8.01□□□□□ -1.13
TPM3-217ENST00000504663 RAB31Q13636 194 aa8.01□□□□□ -1.13
TPM3-217ENST00000504663 USF2Q15853 346 aaPredicted RBP8.01□□□□□ -1.13
TPM3-217ENST00000504663 ZNF343Q6P1L6 599 aa8.01□□□□□ -1.13
TPM3-217ENST00000504663 COMMD7Q86VX2 200 aa8.01□□□□□ -1.13
TPM3-217ENST00000504663 EIF4E3Q8N5X7 224 aaKnown RBP8.01□□□□□ -1.13
TPM3-217ENST00000504663 USMG5Q96IX5 58 aa8.01□□□□□ -1.13
TPM3-217ENST00000504663 MAP1LC3BQ9GZQ8 125 aa8.01□□□□□ -1.13
TPM3-217ENST00000504663 HRH4Q9H3N8 390 aa8.01□□□□□ -1.13
TPM3-217ENST00000504663 GNB4Q9HAV0 340 aa8.01□□□□□ -1.13
TPM3-217ENST00000504663 ZNF355PQ9NSJ1 428 aa8.01□□□□□ -1.13
TPM3-217ENST00000504663 MRPL27Q9P0M9 148 aaKnown RBP8.01□□□□□ -1.13
TPM3-217ENST00000504663 MAST4O15021 2626 aa8.01□□□□□ -1.13
TPM3-217ENST00000504663 TRAV30A0A087WSZ9 112 aa8□□□□□ -1.13
TPM3-217ENST00000504663 TRBV7-1A0A0A6YYK4 115 aa8□□□□□ -1.13
TPM3-217ENST00000504663 C9JQL5 133 aa8□□□□□ -1.13
TPM3-217ENST00000504663 PPP5D1E7EU14 171 aa8□□□□□ -1.13
TPM3-217ENST00000504663 BMPR1BO00238 502 aa8□□□□□ -1.13
TPM3-217ENST00000504663 HMGB3O15347 200 aaKnown RBP8□□□□□ -1.13
TPM3-217ENST00000504663 GNG7O60262 68 aa8□□□□□ -1.13
TPM3-217ENST00000504663 NDUFA7O95182 113 aa8□□□□□ -1.13
TPM3-217ENST00000504663 ELANEP08246 267 aa8□□□□□ -1.13
TPM3-217ENST00000504663 H2AFB1P0C5Y9 115 aa8□□□□□ -1.13
TPM3-217ENST00000504663 FGF8P55075 233 aaPredicted RBP8□□□□□ -1.13
TPM3-217ENST00000504663 ATP5G2Q06055 141 aa8□□□□□ -1.13
TPM3-217ENST00000504663 NDUFA5Q16718 116 aa8□□□□□ -1.13
TPM3-217ENST00000504663 Q56UQ5 140 aa8□□□□□ -1.13
TPM3-217ENST00000504663 LCN15Q6UWW0 184 aa8□□□□□ -1.13
TPM3-217ENST00000504663 CLEC19AQ6UXS0 136 aa8□□□□□ -1.13
TPM3-217ENST00000504663 IL34Q6ZMJ4 242 aa8□□□□□ -1.13
TPM3-217ENST00000504663 C18orf65Q6ZTR6 163 aa8□□□□□ -1.13
TPM3-217ENST00000504663 LINC01006Q8NI28 216 aa8□□□□□ -1.13
TPM3-217ENST00000504663 SUN5Q8TC36 379 aa8□□□□□ -1.13
TPM3-217ENST00000504663 UHRF2Q96PU4 802 aa8□□□□□ -1.13
TPM3-217ENST00000504663 SLC25A2Q9BXI2 301 aa8□□□□□ -1.13
TPM3-217ENST00000504663 ACTR3CQ9C0K3 210 aaPredicted RBP8□□□□□ -1.13
TPM3-217ENST00000504663 TMPRSS5Q9H3S3 457 aa8□□□□□ -1.13
TPM3-217ENST00000504663 DOK5Q9P104 306 aa8□□□□□ -1.13
TPM3-217ENST00000504663 FUT9Q9Y231 359 aa8□□□□□ -1.13
TPM3-217ENST00000504663 C2CD3Q4AC94 2353 aa8□□□□□ -1.13
TPM3-217ENST00000504663 TRAV5A0A0B4J249 113 aa7.99□□□□□ -1.13
TPM3-217ENST00000504663 A0A1B0GV50 99 aa7.99□□□□□ -1.13
TPM3-217ENST00000504663 H3BRN7 92 aa7.99□□□□□ -1.13
TPM3-217ENST00000504663 MRPS12O15235 138 aaKnown RBP7.99□□□□□ -1.13
TPM3-217ENST00000504663 ATP6V1G1O75348 118 aa7.99□□□□□ -1.13
TPM3-217ENST00000504663 IGHV3-11P01762 117 aa7.99□□□□□ -1.13
TPM3-217ENST00000504663 CLEC3BP05452 202 aa7.99□□□□□ -1.13
TPM3-217ENST00000504663 PMS2P11Q13670 270 aa7.99□□□□□ -1.13
TPM3-217ENST00000504663 HIST2H2BDQ6DRA6 164 aa7.99□□□□□ -1.13
TPM3-217ENST00000504663 OR51G1Q8NGK1 321 aa7.99□□□□□ -1.13
TPM3-217ENST00000504663 GATAD1Q8WUU5 269 aa7.99□□□□□ -1.13
TPM3-217ENST00000504663 SFT2D1Q8WV19 159 aa7.99□□□□□ -1.13
TPM3-217ENST00000504663 RNF125Q96EQ8 232 aa7.99□□□□□ -1.13
TPM3-217ENST00000504663 FAM210AQ96ND0 272 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms