RNA–Protein interactions for RNA: ENST00000504223.1

SH3TC1-208, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 3

Gene SH3TC1, Length 698 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-208ENST00000504223 PAFAH1B2P68402 229 aa13.24□□□□□ -0.29
SH3TC1-208ENST00000504223 LEMD1Q68G75 181 aa13.24□□□□□ -0.29
SH3TC1-208ENST00000504223 STXBP6Q8NFX7 210 aa13.24□□□□□ -0.29
SH3TC1-208ENST00000504223 DCANP1Q8TF63 244 aa13.24□□□□□ -0.29
SH3TC1-208ENST00000504223 RABAC1Q9UI14 185 aa13.24□□□□□ -0.29
SH3TC1-208ENST00000504223 H3BP45 60 aa13.23□□□□□ -0.29
SH3TC1-208ENST00000504223 DNASE2O00115 360 aaPredicted RBP13.23□□□□□ -0.29
SH3TC1-208ENST00000504223 LYRM1O43325 122 aa13.23□□□□□ -0.29
SH3TC1-208ENST00000504223 MED6O75586 246 aa13.23□□□□□ -0.29
SH3TC1-208ENST00000504223 EWSR1Q01844 656 aaKnown RBP eCLIP13.23□□□□□ -0.29
SH3TC1-208ENST00000504223 ID3Q02535 119 aa13.23□□□□□ -0.29
SH3TC1-208ENST00000504223 OR51G1Q8NGK1 321 aa13.23□□□□□ -0.29
SH3TC1-208ENST00000504223 OR4D5Q8NGN0 318 aa13.23□□□□□ -0.29
SH3TC1-208ENST00000504223 SLC35E1Q96K37 410 aa13.23□□□□□ -0.29
SH3TC1-208ENST00000504223 C20orf85Q9H1P6 137 aa13.23□□□□□ -0.29
SH3TC1-208ENST00000504223 PAIP2BQ9ULR5 123 aaKnown RBP13.23□□□□□ -0.29
SH3TC1-208ENST00000504223 ALMS1Q8TCU4 4167 aa13.23□□□□□ -0.29
SH3TC1-208ENST00000504223 CENPXA8MT69 81 aa13.22□□□□□ -0.29
SH3TC1-208ENST00000504223 BUB3O43684 328 aa13.22□□□□□ -0.29
SH3TC1-208ENST00000504223 POLR2GP62487 172 aaKnown RBP eCLIP13.22□□□□□ -0.29
SH3TC1-208ENST00000504223 CNPY1Q3B7I2 92 aa13.22□□□□□ -0.29
SH3TC1-208ENST00000504223 C4orf46Q504U0 113 aa13.22□□□□□ -0.29
SH3TC1-208ENST00000504223 COQ8AQ8NI60 647 aa13.22□□□□□ -0.29
SH3TC1-208ENST00000504223 RNF125Q96EQ8 232 aa13.22□□□□□ -0.29
SH3TC1-208ENST00000504223 A0A0J9YWU9 116 aa13.21□□□□□ -0.29
SH3TC1-208ENST00000504223 A6NHS1 94 aa13.21□□□□□ -0.29
SH3TC1-208ENST00000504223 ZFP92A6NM28 416 aa13.21□□□□□ -0.29
SH3TC1-208ENST00000504223 RAB11AP62491 216 aa13.21□□□□□ -0.29
SH3TC1-208ENST00000504223 THAP8Q8NA92 274 aa13.21□□□□□ -0.29
SH3TC1-208ENST00000504223 CIB3Q96Q77 187 aaPredicted RBP13.21□□□□□ -0.29
SH3TC1-208ENST00000504223 CSTL1Q9H114 145 aa13.21□□□□□ -0.29
SH3TC1-208ENST00000504223 CCNKO75909 580 aa13.2□□□□□ -0.3
SH3TC1-208ENST00000504223 TCRBP04435 133 aa13.2□□□□□ -0.3
SH3TC1-208ENST00000504223 ZNF688P0C7X2 276 aa13.2□□□□□ -0.3
SH3TC1-208ENST00000504223 PAX9P55771 341 aa13.2□□□□□ -0.3
SH3TC1-208ENST00000504223 OR2F1Q13607 317 aa13.2□□□□□ -0.3
SH3TC1-208ENST00000504223 SPANXN5Q5MJ07 72 aa13.2□□□□□ -0.3
SH3TC1-208ENST00000504223 MITD1Q8WV92 249 aa13.2□□□□□ -0.3
SH3TC1-208ENST00000504223 NARS2Q96I59 477 aaKnown RBP13.2□□□□□ -0.3
SH3TC1-208ENST00000504223 TRAV6A0A075B6T7 132 aa13.19□□□□□ -0.3
SH3TC1-208ENST00000504223 PMS2P5A8MQ11 134 aa13.19□□□□□ -0.3
SH3TC1-208ENST00000504223 NKX2-1P43699 371 aaPredicted RBP13.19□□□□□ -0.3
SH3TC1-208ENST00000504223 GSG1LQ6UXU4 331 aa13.19□□□□□ -0.3
SH3TC1-208ENST00000504223 TMEM182Q6ZP80 229 aaPredicted RBP13.19□□□□□ -0.3
SH3TC1-208ENST00000504223 GRAMD2BQ96HH9 432 aa13.19□□□□□ -0.3
SH3TC1-208ENST00000504223 TRGV9Q99603 122 aa13.19□□□□□ -0.3
SH3TC1-208ENST00000504223 CCDC32Q9BV29 185 aa13.19□□□□□ -0.3
SH3TC1-208ENST00000504223 PBDC1Q9BVG4 233 aa13.19□□□□□ -0.3
SH3TC1-208ENST00000504223 TBC1D24Q9ULP9 559 aa13.19□□□□□ -0.3
SH3TC1-208ENST00000504223 KNCNA6PVL3 124 aa13.18□□□□□ -0.3
SH3TC1-208ENST00000504223 SSSCA1O60232 199 aa13.18□□□□□ -0.3
SH3TC1-208ENST00000504223 GIG44P09565 113 aaPredicted RBP13.18□□□□□ -0.3
SH3TC1-208ENST00000504223 EIF2B2P49770 351 aaKnown RBP13.18□□□□□ -0.3
SH3TC1-208ENST00000504223 ACOT7LQ6ZUV0 252 aa13.18□□□□□ -0.3
SH3TC1-208ENST00000504223 SEC22CQ9BRL7 303 aa13.18□□□□□ -0.3
SH3TC1-208ENST00000504223 RCL1Q9Y2P8 373 aaKnown RBP13.18□□□□□ -0.3
SH3TC1-208ENST00000504223 HYDINQ4G0P3 5121 aa13.18□□□□□ -0.3
SH3TC1-208ENST00000504223 HELTA6NFD8 242 aa13.17□□□□□ -0.3
SH3TC1-208ENST00000504223 CCSO14618 274 aa13.17□□□□□ -0.3
SH3TC1-208ENST00000504223 IFNA21P01568 189 aa13.17□□□□□ -0.3
SH3TC1-208ENST00000504223 ATF4P18848 351 aaPredicted RBP13.17□□□□□ -0.3
SH3TC1-208ENST00000504223 GATA2P23769 480 aaPredicted RBP13.17□□□□□ -0.3
SH3TC1-208ENST00000504223 LYZP61626 148 aa13.17□□□□□ -0.3
SH3TC1-208ENST00000504223 IAH1Q2TAA2 248 aaPredicted RBP13.17□□□□□ -0.3
SH3TC1-208ENST00000504223 OR8G2PQ6IF36 304 aa13.17□□□□□ -0.3
SH3TC1-208ENST00000504223 SIGLEC15Q6ZMC9 328 aa13.17□□□□□ -0.3
SH3TC1-208ENST00000504223 LINC00299Q6ZSB3 139 aa13.17□□□□□ -0.3
SH3TC1-208ENST00000504223 TRPT1Q86TN4 253 aaKnown RBP13.17□□□□□ -0.3
SH3TC1-208ENST00000504223 ZBTB8BQ8NAP8 495 aaPredicted RBP13.17□□□□□ -0.3
SH3TC1-208ENST00000504223 GATAD1Q8WUU5 269 aa13.17□□□□□ -0.3
SH3TC1-208ENST00000504223 NUDT15Q9NV35 164 aa13.17□□□□□ -0.3
SH3TC1-208ENST00000504223 PSENENQ9NZ42 101 aa13.17□□□□□ -0.3
SH3TC1-208ENST00000504223 STRAPQ9Y3F4 350 aaKnown RBP13.17□□□□□ -0.3
SH3TC1-208ENST00000504223 JTBO76095 146 aa13.16□□□□□ -0.3
SH3TC1-208ENST00000504223 SCGB1D2O95969 90 aa13.15□□□□□ -0.3
SH3TC1-208ENST00000504223 CA1P00915 261 aaPredicted RBP13.15□□□□□ -0.3
SH3TC1-208ENST00000504223 RPP30P78346 268 aaKnown RBP13.15□□□□□ -0.3
SH3TC1-208ENST00000504223 PSMG4Q5JS54 123 aa13.15□□□□□ -0.3
SH3TC1-208ENST00000504223 TMEM14EPQ6UXP3 125 aa13.15□□□□□ -0.3
SH3TC1-208ENST00000504223 SMIM8Q96KF7 97 aa13.15□□□□□ -0.3
SH3TC1-208ENST00000504223 WDR12Q9GZL7 423 aaKnown RBP13.15□□□□□ -0.3
SH3TC1-208ENST00000504223 NRN1Q9NPD7 142 aa13.15□□□□□ -0.3
SH3TC1-208ENST00000504223 SNRPGP15A8MWD9 76 aa13.14□□□□□ -0.31
SH3TC1-208ENST00000504223 MBPP02686 304 aaPredicted RBP13.14□□□□□ -0.31
SH3TC1-208ENST00000504223 C4BPBP20851 252 aa13.14□□□□□ -0.31
SH3TC1-208ENST00000504223 AP2S1P53680 142 aaPredicted RBP13.14□□□□□ -0.31
SH3TC1-208ENST00000504223 IFITM3Q01628 133 aa13.14□□□□□ -0.31
SH3TC1-208ENST00000504223 PMS2P11Q13670 270 aa13.14□□□□□ -0.31
SH3TC1-208ENST00000504223 C17orf77Q96MU5 243 aa13.14□□□□□ -0.31
SH3TC1-208ENST00000504223 GSKIPQ9P0R6 139 aa13.14□□□□□ -0.31
SH3TC1-208ENST00000504223 EPPK1P58107 5090 aaKnown RBP13.13□□□□□ -0.31
SH3TC1-208ENST00000504223 CXorf65A6NEN9 183 aa13.13□□□□□ -0.31
SH3TC1-208ENST00000504223 H2AFB2P0C5Z0 115 aa13.13□□□□□ -0.31
SH3TC1-208ENST00000504223 METTL15P1P0C7V9 234 aa13.13□□□□□ -0.31
SH3TC1-208ENST00000504223 DEFB1P60022 68 aa13.13□□□□□ -0.31
SH3TC1-208ENST00000504223 AKR1C1Q04828 323 aa13.13□□□□□ -0.31
SH3TC1-208ENST00000504223 ARL16Q0P5N6 197 aa13.13□□□□□ -0.31
SH3TC1-208ENST00000504223 ACTL10Q5JWF8 245 aa13.13□□□□□ -0.31
SH3TC1-208ENST00000504223 STHQ8IWL8 128 aa13.13□□□□□ -0.31
SH3TC1-208ENST00000504223 TMEM217Q8N7C4 229 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms