RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 IGHV3-53P01767 116 aa5.9□□□□□ -1.47
SYNPO2-205ENST00000504178 S100A7L2Q5SY68 101 aa5.9□□□□□ -1.47
SYNPO2-205ENST00000504178 TREML4Q6UXN2 200 aa5.9□□□□□ -1.47
SYNPO2-205ENST00000504178 GZMBP10144 247 aa5.89□□□□□ -1.47
SYNPO2-205ENST00000504178 PIP4P2Q8N4L2 257 aa5.89□□□□□ -1.47
SYNPO2-205ENST00000504178 TSKUQ8WUA8 353 aa5.89□□□□□ -1.47
SYNPO2-205ENST00000504178 CHCHD1Q96BP2 118 aaKnown RBP5.89□□□□□ -1.47
SYNPO2-205ENST00000504178 SCN2AQ99250 2005 aa5.89□□□□□ -1.47
SYNPO2-205ENST00000504178 MBD3L4A6NDZ8 208 aaPredicted RBP5.89□□□□□ -1.47
SYNPO2-205ENST00000504178 MBD3L3A6NE82 208 aaPredicted RBP5.89□□□□□ -1.47
SYNPO2-205ENST00000504178 MBD3L5A6NJ08 208 aaPredicted RBP5.89□□□□□ -1.47
SYNPO2-205ENST00000504178 NPIPB5A8MRT5 1133 aa5.89□□□□□ -1.47
SYNPO2-205ENST00000504178 PPBPP02775 128 aa5.89□□□□□ -1.47
SYNPO2-205ENST00000504178 PSG1P11464 419 aa5.89□□□□□ -1.47
SYNPO2-205ENST00000504178 OR2K2Q8NGT1 345 aa5.89□□□□□ -1.47
SYNPO2-205ENST00000504178 MBD3L2Q8NHZ7 208 aaPredicted RBP5.89□□□□□ -1.47
SYNPO2-205ENST00000504178 RNF166Q96A37 237 aaPredicted RBP5.89□□□□□ -1.47
SYNPO2-205ENST00000504178 MGST2Q99735 147 aa5.89□□□□□ -1.47
SYNPO2-205ENST00000504178 GNB1LQ9BYB4 327 aa5.89□□□□□ -1.47
SYNPO2-205ENST00000504178 PMS2P5A8MQ11 134 aa5.89□□□□□ -1.47
SYNPO2-205ENST00000504178 GAS1P54826 345 aa5.89□□□□□ -1.47
SYNPO2-205ENST00000504178 SP5Q6BEB4 398 aaPredicted RBP5.89□□□□□ -1.47
SYNPO2-205ENST00000504178 TEX38Q6PEX7 206 aa5.89□□□□□ -1.47
SYNPO2-205ENST00000504178 EXOC3-AS1Q8N2X6 119 aa5.89□□□□□ -1.47
SYNPO2-205ENST00000504178 OCC1Q8TAD7 63 aa5.89□□□□□ -1.47
SYNPO2-205ENST00000504178 TRGV9Q99603 122 aa5.89□□□□□ -1.47
SYNPO2-205ENST00000504178 SBF1O95248 1867 aa5.89□□□□□ -1.47
SYNPO2-205ENST00000504178 TRAV3A0A0B4J244 114 aa5.89□□□□□ -1.47
SYNPO2-205ENST00000504178 A0A1B0GWJ7 208 aa5.89□□□□□ -1.47
SYNPO2-205ENST00000504178 TMEM8BA6NDV4 472 aa5.89□□□□□ -1.47
SYNPO2-205ENST00000504178 HOXA3O43365 443 aaPredicted RBP5.89□□□□□ -1.47
SYNPO2-205ENST00000504178 CA1P00915 261 aaPredicted RBP5.89□□□□□ -1.47
SYNPO2-205ENST00000504178 LY6G6FQ5SQ64 297 aa5.89□□□□□ -1.47
SYNPO2-205ENST00000504178 NIT1Q86X76 327 aa5.89□□□□□ -1.47
SYNPO2-205ENST00000504178 PNRC2Q9NPJ4 139 aaKnown RBP5.89□□□□□ -1.47
SYNPO2-205ENST00000504178 MST1P26927 711 aa5.89□□□□□ -1.47
SYNPO2-205ENST00000504178 NPC2P61916 151 aa5.89□□□□□ -1.47
SYNPO2-205ENST00000504178 C17orf82Q86X59 251 aaPredicted RBP5.89□□□□□ -1.47
SYNPO2-205ENST00000504178 SSC4DQ8WTU2 575 aa5.89□□□□□ -1.47
SYNPO2-205ENST00000504178 F8VVB4 439 aa5.88□□□□□ -1.47
SYNPO2-205ENST00000504178 F8VWA3 439 aa5.88□□□□□ -1.47
SYNPO2-205ENST00000504178 SH2D1AO60880 128 aa5.88□□□□□ -1.47
SYNPO2-205ENST00000504178 INSP01308 110 aa5.88□□□□□ -1.47
SYNPO2-205ENST00000504178 LYPD2Q6UXB3 125 aa5.88□□□□□ -1.47
SYNPO2-205ENST00000504178 TMEM86BQ8N661 226 aa5.88□□□□□ -1.47
SYNPO2-205ENST00000504178 USMG5Q96IX5 58 aa5.88□□□□□ -1.47
SYNPO2-205ENST00000504178 SLC25A2Q9BXI2 301 aa5.88□□□□□ -1.47
SYNPO2-205ENST00000504178 GREB1Q4ZG55 1949 aa5.88□□□□□ -1.47
SYNPO2-205ENST00000504178 A8MXK9 166 aa5.88□□□□□ -1.47
SYNPO2-205ENST00000504178 RIPPLY3P57055 190 aa5.88□□□□□ -1.47
SYNPO2-205ENST00000504178 ID3Q02535 119 aa5.88□□□□□ -1.47
SYNPO2-205ENST00000504178 ATP5L2Q7Z4Y8 100 aa5.88□□□□□ -1.47
SYNPO2-205ENST00000504178 MTURNQ8N3F0 131 aa5.88□□□□□ -1.47
SYNPO2-205ENST00000504178 NEUROG3Q9Y4Z2 214 aa5.88□□□□□ -1.47
SYNPO2-205ENST00000504178 MYOFQ9NZM1 2061 aa5.88□□□□□ -1.47
SYNPO2-205ENST00000504178 FCN3O75636 299 aa5.88□□□□□ -1.47
SYNPO2-205ENST00000504178 C5orf64Q2M2E5 130 aa5.88□□□□□ -1.47
SYNPO2-205ENST00000504178 WDR83OSQ9Y284 106 aa5.88□□□□□ -1.47
SYNPO2-205ENST00000504178 RUSC1-AS1Q66K80 236 aa5.88□□□□□ -1.47
SYNPO2-205ENST00000504178 ZNF474Q6S9Z5 364 aaPredicted RBP5.88□□□□□ -1.47
SYNPO2-205ENST00000504178 H3BUT2 72 aa5.88□□□□□ -1.47
SYNPO2-205ENST00000504178 PSPNO60542 156 aa5.88□□□□□ -1.47
SYNPO2-205ENST00000504178 TOMM40O96008 361 aa5.88□□□□□ -1.47
SYNPO2-205ENST00000504178 B3GALT5-AS1P59052 145 aa5.88□□□□□ -1.47
SYNPO2-205ENST00000504178 FOXL1Q12952 345 aa5.88□□□□□ -1.47
SYNPO2-205ENST00000504178 DEFB104AQ8WTQ1 72 aa5.88□□□□□ -1.47
SYNPO2-205ENST00000504178 TMEM190Q8WZ59 177 aa5.88□□□□□ -1.47
SYNPO2-205ENST00000504178 GGTLC1Q9BX51 225 aa5.88□□□□□ -1.47
SYNPO2-205ENST00000504178 CST9LQ9H4G1 147 aa5.88□□□□□ -1.47
SYNPO2-205ENST00000504178 RNF114Q9Y508 228 aa5.88□□□□□ -1.47
SYNPO2-205ENST00000504178 TRAV8-4A0A0B4J246 113 aa5.88□□□□□ -1.47
SYNPO2-205ENST00000504178 A0A0U1RRA0 63 aa5.88□□□□□ -1.47
SYNPO2-205ENST00000504178 ZNF362Q5T0B9 420 aaPredicted RBP5.88□□□□□ -1.47
SYNPO2-205ENST00000504178 NHP2Q9NX24 153 aaKnown RBP5.88□□□□□ -1.47
SYNPO2-205ENST00000504178 FAM169BQ8N8A8 192 aa5.87□□□□□ -1.47
SYNPO2-205ENST00000504178 BPESC1Q9GZL8 116 aa5.87□□□□□ -1.47
SYNPO2-205ENST00000504178 NUP214P35658 2090 aaPredicted RBP5.87□□□□□ -1.47
SYNPO2-205ENST00000504178 A0A087WX48 190 aa5.87□□□□□ -1.47
SYNPO2-205ENST00000504178 RNF223E7ERA6 249 aa5.87□□□□□ -1.47
SYNPO2-205ENST00000504178 NAPSAO96009 420 aa5.87□□□□□ -1.47
SYNPO2-205ENST00000504178 Q6P435 159 aa5.87□□□□□ -1.47
SYNPO2-205ENST00000504178 MORN3Q6PF18 240 aaPredicted RBP5.87□□□□□ -1.47
SYNPO2-205ENST00000504178 C9orf139Q6ZV77 190 aa5.87□□□□□ -1.47
SYNPO2-205ENST00000504178 UBE2E2Q96LR5 201 aa5.87□□□□□ -1.47
SYNPO2-205ENST00000504178 MSRB2Q9Y3D2 182 aa5.87□□□□□ -1.47
SYNPO2-205ENST00000504178 H0YIZ8 118 aa5.87□□□□□ -1.47
SYNPO2-205ENST00000504178 NCR2O95944 276 aa5.87□□□□□ -1.47
SYNPO2-205ENST00000504178 ZNF138P52744 262 aa5.87□□□□□ -1.47
SYNPO2-205ENST00000504178 RPL36AP83881 106 aaKnown RBP5.87□□□□□ -1.47
SYNPO2-205ENST00000504178 PSG3Q16557 428 aa5.87□□□□□ -1.47
SYNPO2-205ENST00000504178 CD300EQ496F6 205 aaPredicted RBP5.87□□□□□ -1.47
SYNPO2-205ENST00000504178 LYZL1Q6UWQ5 148 aa5.87□□□□□ -1.47
SYNPO2-205ENST00000504178 C3orf56Q8N813 242 aa5.87□□□□□ -1.47
SYNPO2-205ENST00000504178 RPL36ALQ969Q0 106 aaKnown RBP5.87□□□□□ -1.47
SYNPO2-205ENST00000504178 PRDM13Q9H4Q3 707 aa5.87□□□□□ -1.47
SYNPO2-205ENST00000504178 THSD7BQ9C0I4 1608 aa5.87□□□□□ -1.47
SYNPO2-205ENST00000504178 TRAV8-2A0A0B4J237 113 aa5.87□□□□□ -1.47
SYNPO2-205ENST00000504178 SRRM4A7MD48 611 aaKnown RBP5.87□□□□□ -1.47
SYNPO2-205ENST00000504178 CDK2AP2O75956 126 aa5.87□□□□□ -1.47
SYNPO2-205ENST00000504178 IGHG3P01860 377 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms