RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 PPP1R27Q86WC6 154 aa7.87□□□□□ -1.15
CLIP1-204ENST00000501271 KIR2DL5AQ8N109 375 aa7.87□□□□□ -1.15
CLIP1-204ENST00000501271 SGK494Q96LW2 274 aa7.87□□□□□ -1.15
CLIP1-204ENST00000501271 RCHY1Q96PM5 261 aa7.87□□□□□ -1.15
CLIP1-204ENST00000501271 TBX15Q96SF7 602 aa7.87□□□□□ -1.15
CLIP1-204ENST00000501271 C7orf69Q9H7B7 122 aa7.87□□□□□ -1.15
CLIP1-204ENST00000501271 RNF114Q9Y508 228 aa7.87□□□□□ -1.15
CLIP1-204ENST00000501271 CSMD1Q96PZ7 3565 aa7.87□□□□□ -1.15
CLIP1-204ENST00000501271 PPIAL4CA0A0B4J2A2 164 aa7.87□□□□□ -1.15
CLIP1-204ENST00000501271 ZNF705FA8MVS1 300 aaPredicted RBP7.87□□□□□ -1.15
CLIP1-204ENST00000501271 ZNF705DP0CH99 300 aaPredicted RBP7.87□□□□□ -1.15
CLIP1-204ENST00000501271 ZNF705BP0CI00 300 aaPredicted RBP7.87□□□□□ -1.15
CLIP1-204ENST00000501271 PPIAL4GP0DN37 164 aa7.87□□□□□ -1.15
CLIP1-204ENST00000501271 RPL19P84098 196 aaKnown RBP7.87□□□□□ -1.15
CLIP1-204ENST00000501271 C1orf194Q5T5A4 169 aa7.87□□□□□ -1.15
CLIP1-204ENST00000501271 TPTE2P1Q5T6R2 138 aa7.87□□□□□ -1.15
CLIP1-204ENST00000501271 LEMD1Q68G75 181 aa7.87□□□□□ -1.15
CLIP1-204ENST00000501271 PRR27Q6MZM9 219 aa7.87□□□□□ -1.15
CLIP1-204ENST00000501271 TOMM20LQ6UXN7 152 aa7.87□□□□□ -1.15
CLIP1-204ENST00000501271 FAM231DQ6ZW35 169 aa7.87□□□□□ -1.15
CLIP1-204ENST00000501271 BEND2Q8NDZ0 799 aa7.87□□□□□ -1.15
CLIP1-204ENST00000501271 C22orf15Q8WYQ4 148 aa7.87□□□□□ -1.15
CLIP1-204ENST00000501271 FBXL15Q9H469 300 aa7.87□□□□□ -1.15
CLIP1-204ENST00000501271 F11RQ9Y624 299 aaKnown RBP7.87□□□□□ -1.15
CLIP1-204ENST00000501271 HLA-DQA1P01909 254 aa7.86□□□□□ -1.15
CLIP1-204ENST00000501271 GP9P14770 177 aa7.86□□□□□ -1.15
CLIP1-204ENST00000501271 SRIP30626 198 aa7.86□□□□□ -1.15
CLIP1-204ENST00000501271 TMEM183BQ1AE95 376 aa7.86□□□□□ -1.15
CLIP1-204ENST00000501271 COX19Q49B96 90 aa7.86□□□□□ -1.15
CLIP1-204ENST00000501271 NUDT10Q8NFP7 164 aa7.86□□□□□ -1.15
CLIP1-204ENST00000501271 NUDT11Q96G61 164 aa7.86□□□□□ -1.15
CLIP1-204ENST00000501271 SAMD10Q9BYL1 202 aa7.86□□□□□ -1.15
CLIP1-204ENST00000501271 EPDR1Q9UM22 224 aa7.86□□□□□ -1.15
CLIP1-204ENST00000501271 SPTA1P02549 2419 aa7.86□□□□□ -1.15
CLIP1-204ENST00000501271 H3BTX0 84 aa7.86□□□□□ -1.15
CLIP1-204ENST00000501271 CORTO00230 105 aa7.86□□□□□ -1.15
CLIP1-204ENST00000501271 EREGO14944 169 aa7.86□□□□□ -1.15
CLIP1-204ENST00000501271 HYPMO75409 117 aa7.86□□□□□ -1.15
CLIP1-204ENST00000501271 SLC25A5P05141 298 aaKnown RBP7.86□□□□□ -1.15
CLIP1-204ENST00000501271 SLAQ13239 276 aa7.86□□□□□ -1.15
CLIP1-204ENST00000501271 TDRG1Q3Y452 100 aa7.86□□□□□ -1.15
CLIP1-204ENST00000501271 ZNF672Q499Z4 452 aaPredicted RBP7.86□□□□□ -1.15
CLIP1-204ENST00000501271 OR10J3Q5JRS4 329 aa7.86□□□□□ -1.15
CLIP1-204ENST00000501271 LDLRAD2Q5SZI1 272 aa7.86□□□□□ -1.15
CLIP1-204ENST00000501271 STXBP6Q8NFX7 210 aa7.86□□□□□ -1.15
CLIP1-204ENST00000501271 SRSF12Q8WXF0 261 aaKnown RBP7.86□□□□□ -1.15
CLIP1-204ENST00000501271 RPEQ96AT9 228 aa7.86□□□□□ -1.15
CLIP1-204ENST00000501271 CBLN4Q9NTU7 201 aa7.86□□□□□ -1.15
CLIP1-204ENST00000501271 RPH3ALQ9UNE2 315 aa7.86□□□□□ -1.15
CLIP1-204ENST00000501271 PGPA6NDG6 321 aa7.85□□□□□ -1.15
CLIP1-204ENST00000501271 LY6HO94772 140 aa7.85□□□□□ -1.15
CLIP1-204ENST00000501271 NBEAP1P0C6P0 100 aa7.85□□□□□ -1.15
CLIP1-204ENST00000501271 BRS3P32247 399 aa7.85□□□□□ -1.15
CLIP1-204ENST00000501271 UBE2G1P62253 170 aa7.85□□□□□ -1.15
CLIP1-204ENST00000501271 PAX2Q02962 417 aa7.85□□□□□ -1.15
CLIP1-204ENST00000501271 CDSNQ15517 529 aa7.85□□□□□ -1.15
CLIP1-204ENST00000501271 ZNF600Q6ZNG1 722 aa7.85□□□□□ -1.15
CLIP1-204ENST00000501271 NUP35Q8NFH5 326 aa7.85□□□□□ -1.15
CLIP1-204ENST00000501271 C2orf88Q9BSF0 95 aa7.85□□□□□ -1.15
CLIP1-204ENST00000501271 FAM103A1Q9BTL3 118 aaKnown RBP7.85□□□□□ -1.15
CLIP1-204ENST00000501271 FBXL7Q9UJT9 491 aa7.85□□□□□ -1.15
CLIP1-204ENST00000501271 LY6LH3BQJ8 138 aa7.84□□□□□ -1.15
CLIP1-204ENST00000501271 GPX1P07203 203 aa7.84□□□□□ -1.15
CLIP1-204ENST00000501271 USF2Q15853 346 aaPredicted RBP7.84□□□□□ -1.15
CLIP1-204ENST00000501271 GDF5OSQ5U4N7 250 aa7.84□□□□□ -1.15
CLIP1-204ENST00000501271 TEX43Q6ZNM6 134 aa7.84□□□□□ -1.15
CLIP1-204ENST00000501271 IGFBPL1Q8WX77 278 aa7.84□□□□□ -1.15
CLIP1-204ENST00000501271 GRAMD2BQ96HH9 432 aa7.84□□□□□ -1.15
CLIP1-204ENST00000501271 KCNS1Q96KK3 526 aa7.84□□□□□ -1.15
CLIP1-204ENST00000501271 ONECUT1Q9UBC0 465 aa7.84□□□□□ -1.15
CLIP1-204ENST00000501271 A0A1W2PS18 150 aa7.84□□□□□ -1.15
CLIP1-204ENST00000501271 PRSS47A8MTI9 375 aa7.84□□□□□ -1.15
CLIP1-204ENST00000501271 ZNF253O75346 499 aa7.84□□□□□ -1.15
CLIP1-204ENST00000501271 APCSP02743 223 aa7.84□□□□□ -1.15
CLIP1-204ENST00000501271 RBP4P02753 201 aa7.84□□□□□ -1.15
CLIP1-204ENST00000501271 IGLC1P0CG04 106 aa7.84□□□□□ -1.15
CLIP1-204ENST00000501271 RNF224P0DH78 156 aa7.84□□□□□ -1.15
CLIP1-204ENST00000501271 CA7P43166 264 aa7.84□□□□□ -1.15
CLIP1-204ENST00000501271 PLP1P60201 277 aa7.84□□□□□ -1.15
CLIP1-204ENST00000501271 C8orf46Q8TAG6 207 aa7.84□□□□□ -1.15
CLIP1-204ENST00000501271 VN1R17PQ8TDU5 208 aa7.84□□□□□ -1.15
CLIP1-204ENST00000501271 WIPF2Q8TF74 440 aaPredicted RBP7.84□□□□□ -1.15
CLIP1-204ENST00000501271 TMEM68Q96MH6 324 aa7.84□□□□□ -1.15
CLIP1-204ENST00000501271 ZNF331Q9NQX6 463 aaPredicted RBP7.84□□□□□ -1.15
CLIP1-204ENST00000501271 TBL2Q9Y4P3 447 aaKnown RBP7.84□□□□□ -1.15
CLIP1-204ENST00000501271 KLF12Q9Y4X4 402 aa7.84□□□□□ -1.15
CLIP1-204ENST00000501271 IGF2RP11717 2491 aa7.84□□□□□ -1.16
CLIP1-204ENST00000501271 VWC2LB2RUY7 222 aa7.83□□□□□ -1.16
CLIP1-204ENST00000501271 I3L2K1 104 aa7.83□□□□□ -1.16
CLIP1-204ENST00000501271 TIMM23O14925 209 aa7.83□□□□□ -1.16
CLIP1-204ENST00000501271 PSG1P11464 419 aa7.83□□□□□ -1.16
CLIP1-204ENST00000501271 LYZP61626 148 aa7.83□□□□□ -1.16
CLIP1-204ENST00000501271 FBXL19-AS1Q494R0 122 aa7.83□□□□□ -1.16
CLIP1-204ENST00000501271 LBHQ53QV2 105 aaPredicted RBP7.83□□□□□ -1.16
CLIP1-204ENST00000501271 LINC00322Q6ZN03 302 aaPredicted RBP7.83□□□□□ -1.16
CLIP1-204ENST00000501271 SIGLECL1Q8N7X8 197 aa7.83□□□□□ -1.16
CLIP1-204ENST00000501271 OR8B3Q8NGG8 313 aa7.83□□□□□ -1.16
CLIP1-204ENST00000501271 OR8B2Q96RD0 313 aa7.83□□□□□ -1.16
CLIP1-204ENST00000501271 NEU1Q99519 415 aa7.83□□□□□ -1.16
CLIP1-204ENST00000501271 ATG101Q9BSB4 218 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms