RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 ZFP92A6NM28 416 aa13.55□□□□□ -0.24
HOXD11-202ENST00000498438 MPTX1A8MV57 137 aa13.55□□□□□ -0.24
HOXD11-202ENST00000498438 K7EQG2 157 aa13.55□□□□□ -0.24
HOXD11-202ENST00000498438 C16orf54Q6UWD8 224 aa13.55□□□□□ -0.24
HOXD11-202ENST00000498438 OR51G1Q8NGK1 321 aa13.55□□□□□ -0.24
HOXD11-202ENST00000498438 RNF183Q96D59 192 aa13.55□□□□□ -0.24
HOXD11-202ENST00000498438 RNF125Q96EQ8 232 aa13.55□□□□□ -0.24
HOXD11-202ENST00000498438 HELTA6NFD8 242 aa13.54□□□□□ -0.24
HOXD11-202ENST00000498438 PLA2G10O15496 165 aa13.54□□□□□ -0.24
HOXD11-202ENST00000498438 EIF2B2P49770 351 aaKnown RBP13.54□□□□□ -0.24
HOXD11-202ENST00000498438 RPP30P78346 268 aaKnown RBP13.54□□□□□ -0.24
HOXD11-202ENST00000498438 ZNF90Q03938 601 aa13.54□□□□□ -0.24
HOXD11-202ENST00000498438 IL17DQ8TAD2 202 aa13.54□□□□□ -0.24
HOXD11-202ENST00000498438 DCANP1Q8TF63 244 aa13.54□□□□□ -0.24
HOXD11-202ENST00000498438 PBDC1Q9BVG4 233 aa13.54□□□□□ -0.24
HOXD11-202ENST00000498438 CSTL1Q9H114 145 aa13.54□□□□□ -0.24
HOXD11-202ENST00000498438 AGRNO00468 2067 aa13.53□□□□□ -0.24
HOXD11-202ENST00000498438 PRSS46E5RG02 174 aa13.53□□□□□ -0.24
HOXD11-202ENST00000498438 H3BP45 60 aa13.53□□□□□ -0.24
HOXD11-202ENST00000498438 LYRM1O43325 122 aa13.53□□□□□ -0.24
HOXD11-202ENST00000498438 IFNA21P01568 189 aa13.53□□□□□ -0.24
HOXD11-202ENST00000498438 C20orf85Q9H1P6 137 aa13.53□□□□□ -0.24
HOXD11-202ENST00000498438 SACSQ9NZJ4 4579 aa13.52□□□□□ -0.24
HOXD11-202ENST00000498438 A0A0J9YWU9 116 aa13.52□□□□□ -0.25
HOXD11-202ENST00000498438 BUB3O43684 328 aa13.52□□□□□ -0.25
HOXD11-202ENST00000498438 ZNF688P0C7X2 276 aa13.52□□□□□ -0.25
HOXD11-202ENST00000498438 ID3Q02535 119 aa13.52□□□□□ -0.25
HOXD11-202ENST00000498438 CNPY1Q3B7I2 92 aa13.52□□□□□ -0.25
HOXD11-202ENST00000498438 SPANXN5Q5MJ07 72 aa13.52□□□□□ -0.25
HOXD11-202ENST00000498438 OR4D5Q8NGN0 318 aa13.52□□□□□ -0.25
HOXD11-202ENST00000498438 IGKV1OR2-108A0A075B7D4 117 aa13.51□□□□□ -0.25
HOXD11-202ENST00000498438 FABP1P07148 127 aa13.51□□□□□ -0.25
HOXD11-202ENST00000498438 NKX2-1P43699 371 aaPredicted RBP13.51□□□□□ -0.25
HOXD11-202ENST00000498438 AP2S1P53680 142 aaPredicted RBP13.51□□□□□ -0.25
HOXD11-202ENST00000498438 LYZP61626 148 aa13.51□□□□□ -0.25
HOXD11-202ENST00000498438 POLR2GP62487 172 aaKnown RBP eCLIP13.51□□□□□ -0.25
HOXD11-202ENST00000498438 OR8G2PQ6IF36 304 aa13.51□□□□□ -0.25
HOXD11-202ENST00000498438 SIGLEC15Q6ZMC9 328 aa13.51□□□□□ -0.25
HOXD11-202ENST00000498438 THAP8Q8NA92 274 aa13.51□□□□□ -0.25
HOXD11-202ENST00000498438 TRGV9Q99603 122 aa13.51□□□□□ -0.25
HOXD11-202ENST00000498438 STRAPQ9Y3F4 350 aaKnown RBP13.51□□□□□ -0.25
HOXD11-202ENST00000498438 RYR2Q92736 4967 aa13.51□□□□□ -0.25
HOXD11-202ENST00000498438 SSSCA1O60232 199 aa13.5□□□□□ -0.25
HOXD11-202ENST00000498438 CA1P00915 261 aaPredicted RBP13.5□□□□□ -0.25
HOXD11-202ENST00000498438 NUP62P37198 522 aaPredicted RBP13.5□□□□□ -0.25
HOXD11-202ENST00000498438 OR2F1Q13607 317 aa13.5□□□□□ -0.25
HOXD11-202ENST00000498438 STHQ8IWL8 128 aa13.5□□□□□ -0.25
HOXD11-202ENST00000498438 MITD1Q8WV92 249 aa13.5□□□□□ -0.25
HOXD11-202ENST00000498438 CCDC32Q9BV29 185 aa13.5□□□□□ -0.25
HOXD11-202ENST00000498438 KNCNA6PVL3 124 aa13.49□□□□□ -0.25
HOXD11-202ENST00000498438 TCRBP04435 133 aa13.49□□□□□ -0.25
HOXD11-202ENST00000498438 EWSR1Q01844 656 aaKnown RBP eCLIP13.49□□□□□ -0.25
HOXD11-202ENST00000498438 IAH1Q2TAA2 248 aaPredicted RBP13.49□□□□□ -0.25
HOXD11-202ENST00000498438 ACOT7LQ6ZUV0 252 aa13.49□□□□□ -0.25
HOXD11-202ENST00000498438 NRN1Q9NPD7 142 aa13.49□□□□□ -0.25
HOXD11-202ENST00000498438 TRAV6A0A075B6T7 132 aa13.48□□□□□ -0.25
HOXD11-202ENST00000498438 LCE6AA0A183 80 aa13.48□□□□□ -0.25
HOXD11-202ENST00000498438 SNRPGP15A8MWD9 76 aa13.48□□□□□ -0.25
HOXD11-202ENST00000498438 SCGB1D2O95969 90 aa13.48□□□□□ -0.25
HOXD11-202ENST00000498438 AKR1C1Q04828 323 aa13.48□□□□□ -0.25
HOXD11-202ENST00000498438 PSMG4Q5JS54 123 aa13.48□□□□□ -0.25
HOXD11-202ENST00000498438 TRPT1Q86TN4 253 aaKnown RBP13.48□□□□□ -0.25
HOXD11-202ENST00000498438 GATAD1Q8WUU5 269 aa13.48□□□□□ -0.25
HOXD11-202ENST00000498438 NUDT15Q9NV35 164 aa13.48□□□□□ -0.25
HOXD11-202ENST00000498438 PSENENQ9NZ42 101 aa13.48□□□□□ -0.25
HOXD11-202ENST00000498438 PFDN2Q9UHV9 154 aa13.48□□□□□ -0.25
HOXD11-202ENST00000498438 LINC00299Q6ZSB3 139 aa13.47□□□□□ -0.25
HOXD11-202ENST00000498438 ZBTB8BQ8NAP8 495 aaPredicted RBP13.47□□□□□ -0.25
HOXD11-202ENST00000498438 SNRPD3P62318 126 aaKnown RBP13.46□□□□□ -0.25
HOXD11-202ENST00000498438 ACTL10Q5JWF8 245 aa13.46□□□□□ -0.25
HOXD11-202ENST00000498438 PPP1R14BQ96C90 147 aa13.46□□□□□ -0.25
HOXD11-202ENST00000498438 SMIM8Q96KF7 97 aa13.46□□□□□ -0.25
HOXD11-202ENST00000498438 RARRES2Q99969 163 aa13.46□□□□□ -0.25
HOXD11-202ENST00000498438 GSKIPQ9P0R6 139 aa13.46□□□□□ -0.25
HOXD11-202ENST00000498438 RCL1Q9Y2P8 373 aaKnown RBP13.46□□□□□ -0.25
HOXD11-202ENST00000498438 SMCO3A2RU48 225 aa13.45□□□□□ -0.26
HOXD11-202ENST00000498438 CCSO14618 274 aa13.45□□□□□ -0.26
HOXD11-202ENST00000498438 CCNKO75909 580 aa13.45□□□□□ -0.26
HOXD11-202ENST00000498438 PAX9P55771 341 aa13.45□□□□□ -0.26
HOXD11-202ENST00000498438 PMS2P11Q13670 270 aa13.45□□□□□ -0.26
HOXD11-202ENST00000498438 OR11H2Q8NH07 326 aa13.45□□□□□ -0.26
HOXD11-202ENST00000498438 S100ZQ8WXG8 99 aa13.45□□□□□ -0.26
HOXD11-202ENST00000498438 SEC22CQ9BRL7 303 aa13.45□□□□□ -0.26
HOXD11-202ENST00000498438 CXorf65A6NEN9 183 aa13.44□□□□□ -0.26
HOXD11-202ENST00000498438 A6NHS1 94 aa13.44□□□□□ -0.26
HOXD11-202ENST00000498438 PMS2P5A8MQ11 134 aa13.44□□□□□ -0.26
HOXD11-202ENST00000498438 CFDP00746 253 aaPredicted RBP13.44□□□□□ -0.26
HOXD11-202ENST00000498438 GIG44P09565 113 aaPredicted RBP13.44□□□□□ -0.26
HOXD11-202ENST00000498438 C4BPBP20851 252 aa13.44□□□□□ -0.26
HOXD11-202ENST00000498438 GATA2P23769 480 aaPredicted RBP13.44□□□□□ -0.26
HOXD11-202ENST00000498438 C1orf194Q5T5A4 169 aa13.44□□□□□ -0.26
HOXD11-202ENST00000498438 TMEM14EPQ6UXP3 125 aa13.44□□□□□ -0.26
HOXD11-202ENST00000498438 TMEM217Q8N7C4 229 aa13.44□□□□□ -0.26
HOXD11-202ENST00000498438 BPIFCQ8NFQ6 507 aa13.44□□□□□ -0.26
HOXD11-202ENST00000498438 ZNF431Q8TF32 576 aaPredicted RBP13.44□□□□□ -0.26
HOXD11-202ENST00000498438 RAB40CQ96S21 281 aa13.44□□□□□ -0.26
HOXD11-202ENST00000498438 SEPSECSQ9HD40 501 aaKnown RBP13.44□□□□□ -0.26
HOXD11-202ENST00000498438 FBXL17Q9UF56 701 aa13.44□□□□□ -0.26
HOXD11-202ENST00000498438 TBC1D24Q9ULP9 559 aa13.44□□□□□ -0.26
HOXD11-202ENST00000498438 ALMS1Q8TCU4 4167 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms