RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 PEBP4Q96S96 227 aa2.13□□□□□ -2.07
CALD1-224ENST00000498254 PKMYT1Q99640 499 aa2.13□□□□□ -2.07
CALD1-224ENST00000498254 PRSS27Q9BQR3 290 aa2.13□□□□□ -2.07
CALD1-224ENST00000498254 TMEM70Q9BUB7 260 aa2.13□□□□□ -2.07
CALD1-224ENST00000498254 ZNF471Q9BX82 626 aaPredicted RBP2.13□□□□□ -2.07
CALD1-224ENST00000498254 TCEAL2Q9H3H9 227 aaPredicted RBP2.13□□□□□ -2.07
CALD1-224ENST00000498254 FAM60AQ9NP50 221 aa2.13□□□□□ -2.07
CALD1-224ENST00000498254 FKBP11Q9NYL4 201 aa2.13□□□□□ -2.07
CALD1-224ENST00000498254 BET1LQ9NYM9 111 aa2.13□□□□□ -2.07
CALD1-224ENST00000498254 TAS2R8Q9NYW2 309 aa2.13□□□□□ -2.07
CALD1-224ENST00000498254 RPUSD1Q9UJJ7 312 aaKnown RBP2.13□□□□□ -2.07
CALD1-224ENST00000498254 DISP2A7MBM2 1401 aa2.13□□□□□ -2.07
CALD1-224ENST00000498254 ABCC5O15440 1437 aa2.13□□□□□ -2.07
CALD1-224ENST00000498254 SBF1O95248 1867 aa2.13□□□□□ -2.07
CALD1-224ENST00000498254 SRCAPQ6ZRS2 3230 aa2.13□□□□□ -2.07
CALD1-224ENST00000498254 RPRD2Q5VT52 1461 aaKnown RBP2.13□□□□□ -2.07
CALD1-224ENST00000498254 MAGI2Q86UL8 1455 aa2.13□□□□□ -2.07
CALD1-224ENST00000498254 NCKAP5O14513 1909 aa2.13□□□□□ -2.07
CALD1-224ENST00000498254 UGGT2Q9NYU1 1516 aa2.12□□□□□ -2.07
CALD1-224ENST00000498254 KIF26AQ9ULI4 1882 aaPredicted RBP2.12□□□□□ -2.07
CALD1-224ENST00000498254 PTPRKQ15262 1439 aa2.12□□□□□ -2.07
CALD1-224ENST00000498254 GPR179Q6PRD1 2367 aa2.12□□□□□ -2.07
CALD1-224ENST00000498254 IGLV2-18A0A075B6J9 118 aa2.12□□□□□ -2.07
CALD1-224ENST00000498254 GGT3PA6NGU5 568 aa2.12□□□□□ -2.07
CALD1-224ENST00000498254 OR51F1A6NGY5 319 aa2.12□□□□□ -2.07
CALD1-224ENST00000498254 C16orf90A8MZG2 172 aa2.12□□□□□ -2.07
CALD1-224ENST00000498254 GGTLC3B5MD39 225 aa2.12□□□□□ -2.07
CALD1-224ENST00000498254 F5H5P2 479 aa2.12□□□□□ -2.07
CALD1-224ENST00000498254 H3BQ15 152 aa2.12□□□□□ -2.07
CALD1-224ENST00000498254 GABARAPH6UMI1 98 aa2.12□□□□□ -2.07
CALD1-224ENST00000498254 M0R233 179 aa2.12□□□□□ -2.07
CALD1-224ENST00000498254 CFDP00746 253 aaPredicted RBP2.12□□□□□ -2.07
CALD1-224ENST00000498254 BCL2P10415 239 aa2.12□□□□□ -2.07
CALD1-224ENST00000498254 FKBP2P26885 142 aaKnown RBP2.12□□□□□ -2.07
CALD1-224ENST00000498254 OR10J1P30954 320 aa2.12□□□□□ -2.07
CALD1-224ENST00000498254 ZNF140P52738 457 aaPredicted RBP2.12□□□□□ -2.07
CALD1-224ENST00000498254 HLA-DRB3P79483 266 aa2.12□□□□□ -2.07
CALD1-224ENST00000498254 FABP5Q01469 135 aa2.12□□□□□ -2.07
CALD1-224ENST00000498254 AKR1C1Q04828 323 aa2.12□□□□□ -2.07
CALD1-224ENST00000498254 ENDOGQ14249 297 aaKnown RBP2.12□□□□□ -2.07
CALD1-224ENST00000498254 LY6EQ16553 131 aa2.12□□□□□ -2.07
CALD1-224ENST00000498254 SPANXN3Q5MJ09 141 aa2.12□□□□□ -2.07
CALD1-224ENST00000498254 C10orf91Q5T1B1 145 aa2.12□□□□□ -2.07
CALD1-224ENST00000498254 FAM104BQ5XKR9 115 aa2.12□□□□□ -2.07
CALD1-224ENST00000498254 LCN15Q6UWW0 184 aa2.12□□□□□ -2.07
CALD1-224ENST00000498254 TCF23Q7RTU1 214 aa2.12□□□□□ -2.07
CALD1-224ENST00000498254 C20orf196Q8IYI0 205 aa2.12□□□□□ -2.07
CALD1-224ENST00000498254 TEX29Q8N6K0 151 aa2.12□□□□□ -2.07
CALD1-224ENST00000498254 ZIC4Q8N9L1 334 aa2.12□□□□□ -2.07
CALD1-224ENST00000498254 LY6G5BQ8NDX9 201 aa2.12□□□□□ -2.07
CALD1-224ENST00000498254 OR51T1Q8NGJ9 327 aa2.12□□□□□ -2.07
CALD1-224ENST00000498254 OR5D14Q8NGL3 314 aa2.12□□□□□ -2.07
CALD1-224ENST00000498254 OR4C16Q8NGL9 310 aa2.12□□□□□ -2.07
CALD1-224ENST00000498254 SLC25A40Q8TBP6 338 aa2.12□□□□□ -2.07
CALD1-224ENST00000498254 RMI2Q96E14 147 aa2.12□□□□□ -2.07
CALD1-224ENST00000498254 ERMAPQ96PL5 475 aaPredicted RBP2.12□□□□□ -2.07
CALD1-224ENST00000498254 SDF2Q99470 211 aa2.12□□□□□ -2.07
CALD1-224ENST00000498254 HIST1H2BLQ99880 126 aa2.12□□□□□ -2.07
CALD1-224ENST00000498254 WDR61Q9GZS3 305 aaKnown RBP2.12□□□□□ -2.07
CALD1-224ENST00000498254 PBOV1Q9GZY1 135 aa2.12□□□□□ -2.07
CALD1-224ENST00000498254 MED28Q9H204 178 aa2.12□□□□□ -2.07
CALD1-224ENST00000498254 PCTPQ9UKL6 214 aa2.12□□□□□ -2.07
CALD1-224ENST00000498254 FUT9Q9Y231 359 aa2.12□□□□□ -2.07
CALD1-224ENST00000498254 WASHC3Q9Y3C0 194 aa2.12□□□□□ -2.07
CALD1-224ENST00000498254 DNMT1P26358 1616 aaKnown RBP2.12□□□□□ -2.07
CALD1-224ENST00000498254 ZCCHC11Q5TAX3 1644 aaKnown RBP2.12□□□□□ -2.07
CALD1-224ENST00000498254 GOLGA3Q08378 1498 aa2.12□□□□□ -2.07
CALD1-224ENST00000498254 MYH9P35579 1960 aaKnown RBP2.12□□□□□ -2.07
CALD1-224ENST00000498254 SCN10AQ9Y5Y9 1956 aa2.12□□□□□ -2.07
CALD1-224ENST00000498254 MAP2P11137 1827 aaKnown RBP2.12□□□□□ -2.07
CALD1-224ENST00000498254 LRRC7Q96NW7 1537 aa2.12□□□□□ -2.07
CALD1-224ENST00000498254 MYH1P12882 1939 aa2.11□□□□□ -2.07
CALD1-224ENST00000498254 KDM5CP41229 1560 aa2.11□□□□□ -2.07
CALD1-224ENST00000498254 ATG2AQ2TAZ0 1938 aa2.11□□□□□ -2.07
CALD1-224ENST00000498254 TICRRQ7Z2Z1 1910 aa2.11□□□□□ -2.07
CALD1-224ENST00000498254 LTN1O94822 1766 aa2.11□□□□□ -2.07
CALD1-224ENST00000498254 KDM6AO15550 1401 aaPredicted RBP2.11□□□□□ -2.07
CALD1-224ENST00000498254 PREX2Q70Z35 1606 aa2.11□□□□□ -2.07
CALD1-224ENST00000498254 A0A087X0T9 212 aa2.11□□□□□ -2.07
CALD1-224ENST00000498254 TRGV10A0A0A0MS01 117 aa2.11□□□□□ -2.07
CALD1-224ENST00000498254 TRAV4A0A0B4J268 109 aa2.11□□□□□ -2.07
CALD1-224ENST00000498254 IGHV1-69-2A0A0G2JMI3 117 aa2.11□□□□□ -2.07
CALD1-224ENST00000498254 A0A0J9YW62 118 aa2.11□□□□□ -2.07
CALD1-224ENST00000498254 TRDV1A0A1B0GX56 115 aa2.11□□□□□ -2.07
CALD1-224ENST00000498254 LY6LH3BQJ8 138 aa2.11□□□□□ -2.07
CALD1-224ENST00000498254 K7ERS5 55 aa2.11□□□□□ -2.07
CALD1-224ENST00000498254 KLF7O75840 302 aaPredicted RBP2.11□□□□□ -2.07
CALD1-224ENST00000498254 SIX6O95475 246 aa2.11□□□□□ -2.07
CALD1-224ENST00000498254 HLA-DRB1P01911 266 aa2.11□□□□□ -2.07
CALD1-224ENST00000498254 IGLV7-43P04211 117 aa2.11□□□□□ -2.07
CALD1-224ENST00000498254 NFYBP25208 207 aa2.11□□□□□ -2.07
CALD1-224ENST00000498254 MP68P56378 58 aa2.11□□□□□ -2.07
CALD1-224ENST00000498254 DIAPH2-AS1Q14236 149 aa2.11□□□□□ -2.07
CALD1-224ENST00000498254 HES1Q14469 280 aa2.11□□□□□ -2.07
CALD1-224ENST00000498254 VMA21Q3ZAQ7 101 aa2.11□□□□□ -2.07
CALD1-224ENST00000498254 CENPWQ5EE01 88 aa2.11□□□□□ -2.07
CALD1-224ENST00000498254 KPRPQ5T749 579 aaPredicted RBP2.11□□□□□ -2.07
CALD1-224ENST00000498254 AMMECR1LQ6DCA0 310 aa2.11□□□□□ -2.07
CALD1-224ENST00000498254 SBSNQ6UWP8 590 aa2.11□□□□□ -2.07
CALD1-224ENST00000498254 TMEM14EPQ6UXP3 125 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms