RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 H3F3AP84243 136 aa0.68□□□□□ -2.3
PSPC1-205ENST00000497722 IAH1Q2TAA2 248 aaPredicted RBP0.68□□□□□ -2.3
PSPC1-205ENST00000497722 DEFB113Q30KQ7 82 aa0.68□□□□□ -2.3
PSPC1-205ENST00000497722 C12orf74Q32Q52 190 aa0.68□□□□□ -2.3
PSPC1-205ENST00000497722 C2orf82Q6UX34 121 aa0.68□□□□□ -2.3
PSPC1-205ENST00000497722 OR51A2Q8NGJ7 313 aa0.68□□□□□ -2.3
PSPC1-205ENST00000497722 SLAMF6Q96DU3 332 aa0.68□□□□□ -2.3
PSPC1-205ENST00000497722 PRAP1Q96NZ9 151 aa0.68□□□□□ -2.3
PSPC1-205ENST00000497722 GLTPQ9NZD2 209 aa0.68□□□□□ -2.3
PSPC1-205ENST00000497722 ROBO3Q96MS0 1386 aa0.68□□□□□ -2.3
PSPC1-205ENST00000497722 A0A087WUJ7 227 aa0.67□□□□□ -2.3
PSPC1-205ENST00000497722 OR2T8A6NH00 312 aa0.67□□□□□ -2.3
PSPC1-205ENST00000497722 INE1O15225 51 aa0.67□□□□□ -2.3
PSPC1-205ENST00000497722 HAND1O96004 215 aa0.67□□□□□ -2.3
PSPC1-205ENST00000497722 S100A6P06703 90 aa0.67□□□□□ -2.3
PSPC1-205ENST00000497722 ERP29P30040 261 aaKnown RBP0.67□□□□□ -2.3
PSPC1-205ENST00000497722 ERVS71-1P61550 626 aa0.67□□□□□ -2.3
PSPC1-205ENST00000497722 KRR1Q13601 381 aaKnown RBP0.67□□□□□ -2.3
PSPC1-205ENST00000497722 Q6Q795 121 aa0.67□□□□□ -2.3
PSPC1-205ENST00000497722 LCA10Q71F78 164 aa0.67□□□□□ -2.3
PSPC1-205ENST00000497722 C12orf45Q8N5I9 185 aaPredicted RBP0.67□□□□□ -2.3
PSPC1-205ENST00000497722 WFDC5Q8TCV5 224 aa0.67□□□□□ -2.3
PSPC1-205ENST00000497722 GPER1Q99527 375 aa0.67□□□□□ -2.3
PSPC1-205ENST00000497722 PRADC1Q9BSG0 188 aa0.67□□□□□ -2.3
PSPC1-205ENST00000497722 SLC22A13Q9Y226 551 aa0.67□□□□□ -2.3
PSPC1-205ENST00000497722 CAMSAP1Q5T5Y3 1602 aa0.67□□□□□ -2.3
PSPC1-205ENST00000497722 SBF1O95248 1867 aa0.67□□□□□ -2.3
PSPC1-205ENST00000497722 CEP192Q8TEP8 1941 aa0.66□□□□□ -2.3
PSPC1-205ENST00000497722 ZFYVE9O95405 1425 aa0.66□□□□□ -2.3
PSPC1-205ENST00000497722 TRGV10A0A0A0MS01 117 aa0.66□□□□□ -2.3
PSPC1-205ENST00000497722 TCRBV4S1A1TA0A5B7 111 aa0.66□□□□□ -2.3
PSPC1-205ENST00000497722 SMIM9A6NGZ8 99 aa0.66□□□□□ -2.3
PSPC1-205ENST00000497722 CST8O60676 142 aa0.66□□□□□ -2.3
PSPC1-205ENST00000497722 TIMM17BO60830 172 aa0.66□□□□□ -2.3
PSPC1-205ENST00000497722 ZNF682O95780 498 aa0.66□□□□□ -2.3
PSPC1-205ENST00000497722 CTXN2P0C2S0 81 aa0.66□□□□□ -2.3
PSPC1-205ENST00000497722 MYL5Q02045 173 aa0.66□□□□□ -2.3
PSPC1-205ENST00000497722 FADDQ13158 208 aa0.66□□□□□ -2.3
PSPC1-205ENST00000497722 SRSF6Q13247 344 aaKnown RBP0.66□□□□□ -2.3
PSPC1-205ENST00000497722 TMEM97Q5BJF2 176 aa0.66□□□□□ -2.3
PSPC1-205ENST00000497722 BCL2L15Q5TBC7 163 aa0.66□□□□□ -2.3
PSPC1-205ENST00000497722 OR52L1Q8NGH7 329 aa0.66□□□□□ -2.3
PSPC1-205ENST00000497722 GNPDA2Q8TDQ7 276 aa0.66□□□□□ -2.3
PSPC1-205ENST00000497722 RNASE7Q9H1E1 156 aaKnown RBP0.66□□□□□ -2.3
PSPC1-205ENST00000497722 TLNRD1Q9H1K6 362 aa0.66□□□□□ -2.3
PSPC1-205ENST00000497722 RNF122Q9H9V4 155 aa0.66□□□□□ -2.3
PSPC1-205ENST00000497722 NMNAT1Q9HAN9 279 aaPredicted RBP0.66□□□□□ -2.3
PSPC1-205ENST00000497722 UBAP1Q9NZ09 502 aa0.66□□□□□ -2.3
PSPC1-205ENST00000497722 ZNF106Q9H2Y7 1883 aaKnown RBP0.66□□□□□ -2.3
PSPC1-205ENST00000497722 PCF11O94913 1555 aaKnown RBP0.66□□□□□ -2.3
PSPC1-205ENST00000497722 MED1Q15648 1581 aaPredicted RBP0.66□□□□□ -2.3
PSPC1-205ENST00000497722 PLXND1Q9Y4D7 1925 aa0.66□□□□□ -2.3
PSPC1-205ENST00000497722 CCDC144AA2RUR9 1427 aa0.65□□□□□ -2.3
PSPC1-205ENST00000497722 EML5Q05BV3 1969 aa0.65□□□□□ -2.31
PSPC1-205ENST00000497722 A0A1W2PPM0 123 aa0.65□□□□□ -2.31
PSPC1-205ENST00000497722 TMEM114B3SHH9 223 aa0.65□□□□□ -2.31
PSPC1-205ENST00000497722 CCL25O15444 150 aa0.65□□□□□ -2.31
PSPC1-205ENST00000497722 DHFRP00374 187 aa0.65□□□□□ -2.31
PSPC1-205ENST00000497722 DYNLT1P63172 113 aa0.65□□□□□ -2.31
PSPC1-205ENST00000497722 PSG9Q00887 426 aa0.65□□□□□ -2.31
PSPC1-205ENST00000497722 YPEL2Q96QA6 119 aa0.65□□□□□ -2.31
PSPC1-205ENST00000497722 TP53RKQ96S44 253 aa0.65□□□□□ -2.31
PSPC1-205ENST00000497722 SIGMAR1Q99720 223 aa0.65□□□□□ -2.31
PSPC1-205ENST00000497722 LINC00467Q9BRT7 94 aa0.65□□□□□ -2.31
PSPC1-205ENST00000497722 TAS2R7Q9NYW3 318 aa0.65□□□□□ -2.31
PSPC1-205ENST00000497722 IDI2-AS1Q9NZ38 188 aa0.65□□□□□ -2.31
PSPC1-205ENST00000497722 FAM32AQ9Y421 112 aaKnown RBP0.65□□□□□ -2.31
PSPC1-205ENST00000497722 KIF1BO60333 1816 aa0.65□□□□□ -2.31
PSPC1-205ENST00000497722 NOTCH1P46531 2555 aa0.64□□□□□ -2.31
PSPC1-205ENST00000497722 CCL16O15467 120 aa0.64□□□□□ -2.31
PSPC1-205ENST00000497722 NDUFB3O43676 98 aa0.64□□□□□ -2.31
PSPC1-205ENST00000497722 KLF7O75840 302 aaPredicted RBP0.64□□□□□ -2.31
PSPC1-205ENST00000497722 CYBAP13498 195 aa0.64□□□□□ -2.31
PSPC1-205ENST00000497722 HOXA6P31267 233 aa0.64□□□□□ -2.31
PSPC1-205ENST00000497722 LINC00322Q6ZN03 302 aaPredicted RBP0.64□□□□□ -2.31
PSPC1-205ENST00000497722 TEN1Q86WV5 123 aa0.64□□□□□ -2.31
PSPC1-205ENST00000497722 ZNF431Q8TF32 576 aaPredicted RBP0.64□□□□□ -2.31
PSPC1-205ENST00000497722 CANT1Q8WVQ1 401 aa0.64□□□□□ -2.31
PSPC1-205ENST00000497722 ORMDL1Q9P0S3 153 aa0.64□□□□□ -2.31
PSPC1-205ENST00000497722 TNFSF18Q9UNG2 199 aa0.64□□□□□ -2.31
PSPC1-205ENST00000497722 LY96Q9Y6Y9 160 aa0.64□□□□□ -2.31
PSPC1-205ENST00000497722 SCN3AQ9NY46 2000 aa0.64□□□□□ -2.31
PSPC1-205ENST00000497722 DENND4CQ5VZ89 1909 aa0.64□□□□□ -2.31
PSPC1-205ENST00000497722 ADGRL3Q9HAR2 1447 aa0.64□□□□□ -2.31
PSPC1-205ENST00000497722 TRBV6-4A0A1B0GX49 114 aa0.63□□□□□ -2.31
PSPC1-205ENST00000497722 TLCD2A6NGC4 264 aa0.63□□□□□ -2.31
PSPC1-205ENST00000497722 CD2P06729 351 aa0.63□□□□□ -2.31
PSPC1-205ENST00000497722 PIGPP57054 158 aa0.63□□□□□ -2.31
PSPC1-205ENST00000497722 LIN52Q52LA3 116 aa0.63□□□□□ -2.31
PSPC1-205ENST00000497722 AKIRIN2Q53H80 203 aa0.63□□□□□ -2.31
PSPC1-205ENST00000497722 SPRNQ5BIV9 151 aa0.63□□□□□ -2.31
PSPC1-205ENST00000497722 C4orf22Q6V702 233 aa0.63□□□□□ -2.31
PSPC1-205ENST00000497722 SBSPONQ8IVN8 264 aa0.63□□□□□ -2.31
PSPC1-205ENST00000497722 Q8N6K4 173 aa0.63□□□□□ -2.31
PSPC1-205ENST00000497722 OR5D14Q8NGL3 314 aa0.63□□□□□ -2.31
PSPC1-205ENST00000497722 ADAT3Q96EY9 351 aaPredicted RBP0.63□□□□□ -2.31
PSPC1-205ENST00000497722 SLC25A21Q9BQT8 299 aaPredicted RBP0.63□□□□□ -2.31
PSPC1-205ENST00000497722 ENY2Q9NPA8 101 aa0.63□□□□□ -2.31
PSPC1-205ENST00000497722 ARL2BPQ9Y2Y0 163 aa0.63□□□□□ -2.31
PSPC1-205ENST00000497722 TENM3Q9P273 2699 aa0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms