RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 TMEM78Q5T7P6 136 aa5.02□□□□□ -1.61
SSBP1-213ENST00000496622 Q6ZRM9 215 aa5.02□□□□□ -1.61
SSBP1-213ENST00000496622 GATAD1Q8WUU5 269 aa5.02□□□□□ -1.61
SSBP1-213ENST00000496622 YPEL2Q96QA6 119 aa5.02□□□□□ -1.61
SSBP1-213ENST00000496622 OR2D2Q9H210 308 aa5.02□□□□□ -1.61
SSBP1-213ENST00000496622 V9GYY9 64 aa5.02□□□□□ -1.61
SSBP1-213ENST00000496622 ARHGAP32A7KAX9 2087 aa5.02□□□□□ -1.61
SSBP1-213ENST00000496622 ZANQ9Y493 2812 aa5.02□□□□□ -1.61
SSBP1-213ENST00000496622 TRAV8-6A0A0B4J262 113 aa5.02□□□□□ -1.61
SSBP1-213ENST00000496622 TEX48A0A1B0GUV7 120 aa5.02□□□□□ -1.61
SSBP1-213ENST00000496622 H3BP45 60 aa5.02□□□□□ -1.61
SSBP1-213ENST00000496622 PROP1O75360 226 aa5.02□□□□□ -1.61
SSBP1-213ENST00000496622 IGLC2P0DOY2 106 aa5.02□□□□□ -1.61
SSBP1-213ENST00000496622 IGLC3P0DOY3 106 aa5.02□□□□□ -1.61
SSBP1-213ENST00000496622 RPL30P62888 115 aaKnown RBP5.02□□□□□ -1.61
SSBP1-213ENST00000496622 IL15RAQ13261 267 aa5.02□□□□□ -1.61
SSBP1-213ENST00000496622 LCE3BQ5TA77 95 aa5.02□□□□□ -1.61
SSBP1-213ENST00000496622 ZNF880Q6PDB4 577 aa5.02□□□□□ -1.61
SSBP1-213ENST00000496622 C8orf46Q8TAG6 207 aa5.02□□□□□ -1.61
SSBP1-213ENST00000496622 IL22RA2Q969J5 263 aa5.02□□□□□ -1.61
SSBP1-213ENST00000496622 C2orf50Q96LR7 162 aa5.02□□□□□ -1.61
SSBP1-213ENST00000496622 CISD1Q9NZ45 108 aaKnown RBP5.02□□□□□ -1.61
SSBP1-213ENST00000496622 SELENOKQ9Y6D0 94 aa5.02□□□□□ -1.61
SSBP1-213ENST00000496622 ABCA1O95477 2261 aa5.02□□□□□ -1.61
SSBP1-213ENST00000496622 NF1P21359 2839 aa5.02□□□□□ -1.61
SSBP1-213ENST00000496622 DOCK11Q5JSL3 2073 aa5.01□□□□□ -1.61
SSBP1-213ENST00000496622 TRAV38-1A0A0B4J264 116 aa5.01□□□□□ -1.61
SSBP1-213ENST00000496622 A0A1B0GW64 132 aa5.01□□□□□ -1.61
SSBP1-213ENST00000496622 A0A1W2PPR1 153 aa5.01□□□□□ -1.61
SSBP1-213ENST00000496622 TMEM30CPA0ZSE6 113 aa5.01□□□□□ -1.61
SSBP1-213ENST00000496622 TMEM89A2RUT3 159 aa5.01□□□□□ -1.61
SSBP1-213ENST00000496622 C17orf100A8MU93 164 aa5.01□□□□□ -1.61
SSBP1-213ENST00000496622 NPIPB6E9PJ23 425 aa5.01□□□□□ -1.61
SSBP1-213ENST00000496622 LHBP01229 141 aa5.01□□□□□ -1.61
SSBP1-213ENST00000496622 IGKV1-39P01597 117 aa5.01□□□□□ -1.61
SSBP1-213ENST00000496622 IGKV1D-39P04432 117 aa5.01□□□□□ -1.61
SSBP1-213ENST00000496622 TPT1P13693 172 aaKnown RBP5.01□□□□□ -1.61
SSBP1-213ENST00000496622 TSPOP30536 169 aa5.01□□□□□ -1.61
SSBP1-213ENST00000496622 FCGR2BP31994 310 aaPredicted RBP5.01□□□□□ -1.61
SSBP1-213ENST00000496622 PSG5Q15238 335 aa5.01□□□□□ -1.61
SSBP1-213ENST00000496622 UFSP1Q6NVU6 142 aa5.01□□□□□ -1.61
SSBP1-213ENST00000496622 ZNF66Q6ZN08 573 aa5.01□□□□□ -1.61
SSBP1-213ENST00000496622 ZNF695Q8IW36 515 aa5.01□□□□□ -1.61
SSBP1-213ENST00000496622 DRAM1Q8N682 238 aa5.01□□□□□ -1.61
SSBP1-213ENST00000496622 INO80EQ8NBZ0 244 aaPredicted RBP5.01□□□□□ -1.61
SSBP1-213ENST00000496622 C1orf159Q96HA4 380 aa5.01□□□□□ -1.61
SSBP1-213ENST00000496622 TMEM222Q9H0R3 208 aa5.01□□□□□ -1.61
SSBP1-213ENST00000496622 SAP30LQ9HAJ7 183 aa5.01□□□□□ -1.61
SSBP1-213ENST00000496622 SIGLEC9Q9Y336 463 aa5.01□□□□□ -1.61
SSBP1-213ENST00000496622 PSMB11A5LHX3 300 aa5.01□□□□□ -1.61
SSBP1-213ENST00000496622 GAGE12JA6NER3 117 aa5.01□□□□□ -1.61
SSBP1-213ENST00000496622 GAGE7O76087 117 aa5.01□□□□□ -1.61
SSBP1-213ENST00000496622 KRASP01116 189 aa5.01□□□□□ -1.61
SSBP1-213ENST00000496622 GAGE12FP0CL80 117 aa5.01□□□□□ -1.61
SSBP1-213ENST00000496622 GAGE12GP0CL81 117 aa5.01□□□□□ -1.61
SSBP1-213ENST00000496622 GAGE12IP0CL82 117 aa5.01□□□□□ -1.61
SSBP1-213ENST00000496622 GNLYP22749 145 aa5.01□□□□□ -1.61
SSBP1-213ENST00000496622 LPAR6P43657 344 aa5.01□□□□□ -1.61
SSBP1-213ENST00000496622 BRWD1-AS2P59051 145 aa5.01□□□□□ -1.61
SSBP1-213ENST00000496622 SUMO1P63165 101 aaKnown RBP5.01□□□□□ -1.61
SSBP1-213ENST00000496622 ZNF816Q0VGE8 651 aaPredicted RBP5.01□□□□□ -1.61
SSBP1-213ENST00000496622 GAGE4Q13068 117 aa5.01□□□□□ -1.61
SSBP1-213ENST00000496622 SPATA45Q537H7 98 aa5.01□□□□□ -1.61
SSBP1-213ENST00000496622 RPL39P5Q59GN2 51 aa5.01□□□□□ -1.61
SSBP1-213ENST00000496622 SPINK9Q5DT21 86 aa5.01□□□□□ -1.61
SSBP1-213ENST00000496622 LYPD2Q6UXB3 125 aa5.01□□□□□ -1.61
SSBP1-213ENST00000496622 Q6ZS49 121 aa5.01□□□□□ -1.61
SSBP1-213ENST00000496622 LINC00596Q86U02 117 aa5.01□□□□□ -1.61
SSBP1-213ENST00000496622 KRTAP1-3Q8IUG1 177 aa5.01□□□□□ -1.61
SSBP1-213ENST00000496622 VKORC1L1Q8N0U8 176 aa5.01□□□□□ -1.61
SSBP1-213ENST00000496622 OR4B1Q8NGF8 309 aa5.01□□□□□ -1.61
SSBP1-213ENST00000496622 RNASE6Q93091 150 aaKnown RBP5.01□□□□□ -1.61
SSBP1-213ENST00000496622 C18orf12Q96KH6 178 aa5.01□□□□□ -1.61
SSBP1-213ENST00000496622 DNAJC30Q96LL9 226 aa5.01□□□□□ -1.61
SSBP1-213ENST00000496622 NMES1Q9C002 83 aa5.01□□□□□ -1.61
SSBP1-213ENST00000496622 GNG12Q9UBI6 72 aa5.01□□□□□ -1.61
SSBP1-213ENST00000496622 NSG2Q9Y328 171 aa5.01□□□□□ -1.61
SSBP1-213ENST00000496622 FBN1P35555 2871 aaKnown RBP5.01□□□□□ -1.61
SSBP1-213ENST00000496622 MTORP42345 2549 aa5□□□□□ -1.61
SSBP1-213ENST00000496622 TMEM189A5PLL7 270 aa5□□□□□ -1.61
SSBP1-213ENST00000496622 LINC00473A8K010 186 aa5□□□□□ -1.61
SSBP1-213ENST00000496622 CCDC179H3BU77 68 aa5□□□□□ -1.61
SSBP1-213ENST00000496622 M0R2Z0 102 aa5□□□□□ -1.61
SSBP1-213ENST00000496622 F2RL2O00254 374 aa5□□□□□ -1.61
SSBP1-213ENST00000496622 CTRLP40313 264 aa5□□□□□ -1.61
SSBP1-213ENST00000496622 ANXA2RQ3ZCQ2 193 aa5□□□□□ -1.61
SSBP1-213ENST00000496622 RPL7L1Q6DKI1 246 aaKnown RBP5□□□□□ -1.61
SSBP1-213ENST00000496622 BTNL8Q6UX41 500 aa5□□□□□ -1.61
SSBP1-213ENST00000496622 FAM19A5Q7Z5A7 132 aaPredicted RBP5□□□□□ -1.61
SSBP1-213ENST00000496622 ACY3Q96HD9 319 aa5□□□□□ -1.61
SSBP1-213ENST00000496622 AGMATQ9BSE5 352 aa5□□□□□ -1.61
SSBP1-213ENST00000496622 NPFFR1Q9GZQ6 430 aa5□□□□□ -1.61
SSBP1-213ENST00000496622 DYNLRB1Q9NP97 96 aa5□□□□□ -1.61
SSBP1-213ENST00000496622 KCNIP1Q9NZI2 227 aa5□□□□□ -1.61
SSBP1-213ENST00000496622 RNF7Q9UBF6 113 aa5□□□□□ -1.61
SSBP1-213ENST00000496622 DYSFO75923 2080 aa5□□□□□ -1.61
SSBP1-213ENST00000496622 A0A087WWC5 75 aa5□□□□□ -1.61
SSBP1-213ENST00000496622 TINCRA0A1B0GVN0 87 aa5□□□□□ -1.61
SSBP1-213ENST00000496622 C17orf98A8MV24 154 aa5□□□□□ -1.61
SSBP1-213ENST00000496622 C15orf65H3BRN8 121 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 140.6 ms