RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 C12orf49Q9H741 205 aa6.73□□□□□ -1.33
CRNKL1-205ENST00000496549 MED12Q93074 2177 aa6.72□□□□□ -1.33
CRNKL1-205ENST00000496549 MOSP00540 346 aa6.72□□□□□ -1.33
CRNKL1-205ENST00000496549 INSL3P51460 131 aa6.72□□□□□ -1.33
CRNKL1-205ENST00000496549 NLRC5Q86WI3 1866 aa6.72□□□□□ -1.33
CRNKL1-205ENST00000496549 KIR2DL1P43626 348 aaPredicted RBP6.72□□□□□ -1.33
CRNKL1-205ENST00000496549 MNX1P50219 401 aaPredicted RBP6.72□□□□□ -1.33
CRNKL1-205ENST00000496549 CT83Q5H943 113 aa6.72□□□□□ -1.33
CRNKL1-205ENST00000496549 C6orf15Q6UXA7 325 aaPredicted RBP6.72□□□□□ -1.33
CRNKL1-205ENST00000496549 PRNTQ86SH4 94 aa6.72□□□□□ -1.33
CRNKL1-205ENST00000496549 C15orf53Q8NAA6 179 aa6.72□□□□□ -1.33
CRNKL1-205ENST00000496549 SMRP1Q8NCR6 262 aa6.72□□□□□ -1.33
CRNKL1-205ENST00000496549 FMC1Q96HJ9 113 aa6.72□□□□□ -1.33
CRNKL1-205ENST00000496549 GFRA4Q9GZZ7 299 aa6.72□□□□□ -1.33
CRNKL1-205ENST00000496549 TRBV25-1A0A075B6N4 114 aa6.72□□□□□ -1.33
CRNKL1-205ENST00000496549 C17orf98A8MV24 154 aa6.72□□□□□ -1.33
CRNKL1-205ENST00000496549 COX6CP09669 75 aa6.72□□□□□ -1.33
CRNKL1-205ENST00000496549 MOB3BQ86TA1 216 aa6.72□□□□□ -1.33
CRNKL1-205ENST00000496549 SLC37A2Q8TED4 501 aa6.72□□□□□ -1.33
CRNKL1-205ENST00000496549 DNAJC30Q96LL9 226 aa6.72□□□□□ -1.33
CRNKL1-205ENST00000496549 VWA8A3KMH1 1905 aa6.72□□□□□ -1.33
CRNKL1-205ENST00000496549 C5orf42Q9H799 3197 aa6.72□□□□□ -1.33
CRNKL1-205ENST00000496549 IGHV3-15A0A0B4J1V0 119 aa6.71□□□□□ -1.33
CRNKL1-205ENST00000496549 A0A1W2PPI3 338 aa6.71□□□□□ -1.33
CRNKL1-205ENST00000496549 RHODO00212 210 aa6.71□□□□□ -1.33
CRNKL1-205ENST00000496549 ZIC3O60481 467 aa6.71□□□□□ -1.33
CRNKL1-205ENST00000496549 ZFAND5O76080 213 aa6.71□□□□□ -1.33
CRNKL1-205ENST00000496549 CD24P25063 80 aa6.71□□□□□ -1.33
CRNKL1-205ENST00000496549 SRSF1Q07955 248 aaKnown RBP eCLIP6.71□□□□□ -1.33
CRNKL1-205ENST00000496549 C1orf61Q13536 156 aa6.71□□□□□ -1.33
CRNKL1-205ENST00000496549 GAGE2AQ6NT46 116 aa6.71□□□□□ -1.33
CRNKL1-205ENST00000496549 PATE1Q8WXA2 126 aa6.71□□□□□ -1.33
CRNKL1-205ENST00000496549 FAM168AQ92567 244 aa6.71□□□□□ -1.33
CRNKL1-205ENST00000496549 CSDC2Q9Y534 153 aaKnown RBP6.71□□□□□ -1.33
CRNKL1-205ENST00000496549 MYOFQ9NZM1 2061 aa6.71□□□□□ -1.33
CRNKL1-205ENST00000496549 PATE4P0C8F1 98 aa6.71□□□□□ -1.34
CRNKL1-205ENST00000496549 IFI27P40305 119 aaPredicted RBP6.71□□□□□ -1.34
CRNKL1-205ENST00000496549 MRPL23Q16540 153 aaKnown RBP6.71□□□□□ -1.34
CRNKL1-205ENST00000496549 MBNL2Q5VZF2 373 aaKnown RBP6.71□□□□□ -1.34
CRNKL1-205ENST00000496549 TRAV24A0A0B4J272 114 aa6.71□□□□□ -1.34
CRNKL1-205ENST00000496549 H7C2G1 150 aa6.71□□□□□ -1.34
CRNKL1-205ENST00000496549 ORM2P19652 201 aa6.71□□□□□ -1.34
CRNKL1-205ENST00000496549 LCNL1Q6ZST4 164 aa6.71□□□□□ -1.34
CRNKL1-205ENST00000496549 MOGAT3Q86VF5 341 aa6.71□□□□□ -1.34
CRNKL1-205ENST00000496549 LINC00479Q96M42 142 aa6.71□□□□□ -1.34
CRNKL1-205ENST00000496549 OR2H1Q9GZK4 316 aa6.71□□□□□ -1.34
CRNKL1-205ENST00000496549 PRNDQ9UKY0 176 aa6.71□□□□□ -1.34
CRNKL1-205ENST00000496549 FZR1Q9UM11 496 aa6.71□□□□□ -1.34
CRNKL1-205ENST00000496549 DEFB108AA8MXU0 73 aa6.71□□□□□ -1.34
CRNKL1-205ENST00000496549 C9JAW5 83 aa6.71□□□□□ -1.34
CRNKL1-205ENST00000496549 EDDM3AQ14507 147 aa6.71□□□□□ -1.34
CRNKL1-205ENST00000496549 RSPO4Q2I0M5 234 aaPredicted RBP6.71□□□□□ -1.34
CRNKL1-205ENST00000496549 RAXQ9Y2V3 346 aa6.71□□□□□ -1.34
CRNKL1-205ENST00000496549 LINC00312Q9Y6C7 94 aa6.71□□□□□ -1.34
CRNKL1-205ENST00000496549 IGHV3-43A0A0B4J1X8 118 aa6.7□□□□□ -1.34
CRNKL1-205ENST00000496549 IGKV1-6A0A0C4DH72 117 aa6.7□□□□□ -1.34
CRNKL1-205ENST00000496549 C5orf63A6NC05 138 aa6.7□□□□□ -1.34
CRNKL1-205ENST00000496549 LINC01549A6NIU2 74 aa6.7□□□□□ -1.34
CRNKL1-205ENST00000496549 FOXS1O43638 330 aa6.7□□□□□ -1.34
CRNKL1-205ENST00000496549 OBSL1O75147 1896 aa6.7□□□□□ -1.34
CRNKL1-205ENST00000496549 CFIP05156 583 aa6.7□□□□□ -1.34
CRNKL1-205ENST00000496549 LINC00271P0C7V0 271 aa6.7□□□□□ -1.34
CRNKL1-205ENST00000496549 IGHV3-43DP0DP04 118 aa6.7□□□□□ -1.34
CRNKL1-205ENST00000496549 C2orf27AQ580R0 203 aa6.7□□□□□ -1.34
CRNKL1-205ENST00000496549 C10orf128Q5T292 105 aa6.7□□□□□ -1.34
CRNKL1-205ENST00000496549 MORN3Q6PF18 240 aaPredicted RBP6.7□□□□□ -1.34
CRNKL1-205ENST00000496549 ZNF295-AS1Q8N0V1 137 aa6.7□□□□□ -1.34
CRNKL1-205ENST00000496549 SHISA5Q8N114 240 aa6.7□□□□□ -1.34
CRNKL1-205ENST00000496549 RFESDQ8TAC1 157 aa6.7□□□□□ -1.34
CRNKL1-205ENST00000496549 TM2D2Q9BX73 214 aa6.7□□□□□ -1.34
CRNKL1-205ENST00000496549 PPDPFQ9H3Y8 114 aa6.7□□□□□ -1.34
CRNKL1-205ENST00000496549 COL4A3Q01955 1670 aa6.7□□□□□ -1.34
CRNKL1-205ENST00000496549 TGFBR3LH3BV60 316 aa6.7□□□□□ -1.34
CRNKL1-205ENST00000496549 J3QT63 122 aa6.7□□□□□ -1.34
CRNKL1-205ENST00000496549 OR2H2O95918 312 aa6.7□□□□□ -1.34
CRNKL1-205ENST00000496549 C3orf56Q8N813 242 aa6.7□□□□□ -1.34
CRNKL1-205ENST00000496549 Q8TCH9 128 aa6.7□□□□□ -1.34
CRNKL1-205ENST00000496549 NRGNQ92686 78 aa6.7□□□□□ -1.34
CRNKL1-205ENST00000496549 HIGD1AQ9Y241 93 aa6.7□□□□□ -1.34
CRNKL1-205ENST00000496549 MRPL33O75394 65 aaKnown RBP6.7□□□□□ -1.34
CRNKL1-205ENST00000496549 ACP1P24666 158 aa6.7□□□□□ -1.34
CRNKL1-205ENST00000496549 MPV17P39210 176 aa6.7□□□□□ -1.34
CRNKL1-205ENST00000496549 LEPP41159 167 aa6.7□□□□□ -1.34
CRNKL1-205ENST00000496549 Q6ZS92 163 aa6.7□□□□□ -1.34
CRNKL1-205ENST00000496549 PRDM6Q9NQX0 595 aa6.7□□□□□ -1.34
CRNKL1-205ENST00000496549 MUC3AQ02505 3323 aa6.69□□□□□ -1.34
CRNKL1-205ENST00000496549 DLL1O00548 723 aa6.69□□□□□ -1.34
CRNKL1-205ENST00000496549 TNFRSF6BO95407 300 aa6.69□□□□□ -1.34
CRNKL1-205ENST00000496549 GRPP07492 148 aa6.69□□□□□ -1.34
CRNKL1-205ENST00000496549 ZNF56Q15929 161 aa6.69□□□□□ -1.34
CRNKL1-205ENST00000496549 COL4A4P53420 1690 aaPredicted RBP6.69□□□□□ -1.34
CRNKL1-205ENST00000496549 MYMXA0A1B0GTQ4 84 aa6.69□□□□□ -1.34
CRNKL1-205ENST00000496549 D6R8Y8 96 aa6.69□□□□□ -1.34
CRNKL1-205ENST00000496549 NPIPB11E5RHQ5 1161 aa6.69□□□□□ -1.34
CRNKL1-205ENST00000496549 GNG5P63218 68 aa6.69□□□□□ -1.34
CRNKL1-205ENST00000496549 C1orf43Q9BWL3 253 aa6.69□□□□□ -1.34
CRNKL1-205ENST00000496549 EDA2RQ9HAV5 297 aa6.69□□□□□ -1.34
CRNKL1-205ENST00000496549 CABIN1Q9Y6J0 2220 aa6.69□□□□□ -1.34
CRNKL1-205ENST00000496549 TRBV6-6A0A0A6YYG2 114 aa6.69□□□□□ -1.34
CRNKL1-205ENST00000496549 SHISA9B4DS77 424 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms